RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 FAM187AA6NFU0 413 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 EREGO14944 169 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 GADD45BO75293 160 aaPredicted RBP11.67□□□□□ -0.54
ITGA4-205ENST00000468948 EGFRP00533 1210 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 NLRP8Q86W28 1048 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 GALNT12Q8IXK2 581 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 TINF2Q9BSI4 451 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 ABI2Q9NYB9 513 aaPredicted RBP11.67□□□□□ -0.54
ITGA4-205ENST00000468948 FAM8A1Q9UBU6 413 aa11.67□□□□□ -0.54
ITGA4-205ENST00000468948 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
ITGA4-205ENST00000468948 NXPE4Q6UWF7 544 aa11.66□□□□□ -0.54
ITGA4-205ENST00000468948 PMEPA1Q969W9 287 aa11.66□□□□□ -0.54
ITGA4-205ENST00000468948 BCO2Q9BYV7 579 aa11.66□□□□□ -0.54
ITGA4-205ENST00000468948 ZCCHC2Q9C0B9 1178 aaKnown RBP11.66□□□□□ -0.54
ITGA4-205ENST00000468948 C11orf16Q9NQ32 467 aa11.66□□□□□ -0.54
ITGA4-205ENST00000468948 AVPP01185 164 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 USP17L7P0C7H9 530 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 TAF1CQ15572 869 aaPredicted RBP11.65□□□□□ -0.54
ITGA4-205ENST00000468948 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 HS2ST1Q7LGA3 356 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 TRIM46Q7Z4K8 759 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 SLC43A3Q8NBI5 491 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 SRCIN1Q9C0H9 1055 aa11.65□□□□□ -0.54
ITGA4-205ENST00000468948 DDX41Q9UJV9 622 aaKnown RBP11.65□□□□□ -0.54
ITGA4-205ENST00000468948 CES1P23141 567 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 GNL2Q13823 731 aaKnown RBP11.64□□□□□ -0.55
ITGA4-205ENST00000468948 ZNF394Q53GI3 561 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 MEI1Q5TIA1 1274 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 ZNF654Q8IZM8 581 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 TANGO6Q9C0B7 1094 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 GGT7Q9UJ14 662 aa11.64□□□□□ -0.55
ITGA4-205ENST00000468948 TNNI2P48788 182 aa11.63□□□□□ -0.55
ITGA4-205ENST00000468948 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
ITGA4-205ENST00000468948 EFHC2Q5JST6 749 aa11.63□□□□□ -0.55
ITGA4-205ENST00000468948 USP48Q86UV5 1035 aa11.63□□□□□ -0.55
ITGA4-205ENST00000468948 ZFP42Q96MM3 310 aa11.63□□□□□ -0.55
ITGA4-205ENST00000468948 KCNH4Q9UQ05 1017 aa11.63□□□□□ -0.55
ITGA4-205ENST00000468948 SASH3O75995 380 aa11.62□□□□□ -0.55
ITGA4-205ENST00000468948 RACK1P63244 317 aaKnown RBP11.62□□□□□ -0.55
ITGA4-205ENST00000468948 SUV39H2Q9H5I1 410 aa11.62□□□□□ -0.55
ITGA4-205ENST00000468948 DNMT3LQ9UJW3 386 aa11.62□□□□□ -0.55
ITGA4-205ENST00000468948 PCDHGB7Q9Y5F8 929 aa11.62□□□□□ -0.55
ITGA4-205ENST00000468948 ST13P50502 369 aaKnown RBP11.61□□□□□ -0.55
ITGA4-205ENST00000468948 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
ITGA4-205ENST00000468948 PRKAG2Q9UGJ0 569 aa11.61□□□□□ -0.55
ITGA4-205ENST00000468948 KCNQ4P56696 695 aa11.6□□□□□ -0.55
ITGA4-205ENST00000468948 GRM2Q14416 872 aa11.6□□□□□ -0.55
ITGA4-205ENST00000468948 KRT25Q7Z3Z0 450 aa11.6□□□□□ -0.55
ITGA4-205ENST00000468948 PPP4R2Q9NY27 417 aa11.6□□□□□ -0.55
ITGA4-205ENST00000468948 INPP5FQ9Y2H2 1132 aa11.6□□□□□ -0.55
ITGA4-205ENST00000468948 CYP2E1P05181 493 aaPredicted RBP11.59□□□□□ -0.55
ITGA4-205ENST00000468948 SFSWAPQ12872 951 aaKnown RBP11.59□□□□□ -0.55
ITGA4-205ENST00000468948 CCINQ13939 588 aa11.59□□□□□ -0.55
ITGA4-205ENST00000468948 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
ITGA4-205ENST00000468948 SRA1Q9HD15 236 aaKnown RBP11.59□□□□□ -0.55
ITGA4-205ENST00000468948 ATXN7O15265 892 aaPredicted RBP11.58□□□□□ -0.56
ITGA4-205ENST00000468948 SMCPP49901 116 aaPredicted RBP11.58□□□□□ -0.56
ITGA4-205ENST00000468948 FIGNL1Q6PIW4 674 aa11.58□□□□□ -0.56
ITGA4-205ENST00000468948 EHD4Q9H223 541 aa11.58□□□□□ -0.56
ITGA4-205ENST00000468948 KANSL3Q9P2N6 904 aa11.58□□□□□ -0.56
ITGA4-205ENST00000468948 FAM157BP0CG42 384 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 EDN3P14138 238 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 TARSP26639 723 aaKnown RBP11.57□□□□□ -0.56
ITGA4-205ENST00000468948 GSTT1P30711 240 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 VEGFBP49765 207 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 LBRQ14739 615 aaKnown RBP11.57□□□□□ -0.56
ITGA4-205ENST00000468948 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 RIPOR1Q6ZS17 1223 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 GSX2Q9BZM3 304 aa11.57□□□□□ -0.56
ITGA4-205ENST00000468948 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 A0A1W2PP55 124 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 PHF20L1A8MW92 1017 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 KHNYNO15037 678 aaKnown RBP11.56□□□□□ -0.56
ITGA4-205ENST00000468948 MAN1A2O60476 641 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 MMP20O60882 483 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 ATP2B1P20020 1258 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 DNAJA1P31689 397 aaKnown RBP11.56□□□□□ -0.56
ITGA4-205ENST00000468948 OR13H1Q8NG92 308 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 LATS2Q9NRM7 1088 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 TRAK1Q9UPV9 953 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 PCDHGC4Q9Y5F7 938 aa11.56□□□□□ -0.56
ITGA4-205ENST00000468948 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.56□□□□□ -0.56
ITGA4-205ENST00000468948 EFSO43281 561 aa11.55□□□□□ -0.56
ITGA4-205ENST00000468948 RARAP10276 462 aa11.55□□□□□ -0.56
ITGA4-205ENST00000468948 TTF2Q9UNY4 1162 aaKnown RBP11.55□□□□□ -0.56
ITGA4-205ENST00000468948 DCDC2BA2VCK2 349 aa11.54□□□□□ -0.56
ITGA4-205ENST00000468948 AXIN1O15169 862 aa11.54□□□□□ -0.56
ITGA4-205ENST00000468948 DGAT1O75907 488 aa11.54□□□□□ -0.56
ITGA4-205ENST00000468948 GLIS3Q8NEA6 775 aa11.54□□□□□ -0.56
ITGA4-205ENST00000468948 GMLQ99445 158 aa11.54□□□□□ -0.56
ITGA4-205ENST00000468948 ARID5AQ03989 594 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 TNP2Q05952 138 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 PKDCCQ504Y2 493 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 PEAR1Q5VY43 1037 aaPredicted RBP11.53□□□□□ -0.56
ITGA4-205ENST00000468948 ERMP1Q7Z2K6 904 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 VPS37DQ86XT2 251 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 DHX38Q92620 1227 aaKnown RBP11.53□□□□□ -0.56
ITGA4-205ENST00000468948 PNMA5Q96PV4 448 aa11.53□□□□□ -0.56
ITGA4-205ENST00000468948 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
ITGA4-205ENST00000468948 ZFATQ9P243 1243 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms