RNA–Protein interactions for RNA: ENST00000468796.1

AGAP3-208, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-208	ENST00000468796	PDE8A	O60658	829 aa		11.21	□□□□□ -0.61
AGAP3-208	ENST00000468796	DDN	O94850	711 aa	Predicted RBP	11.21	□□□□□ -0.61
AGAP3-208	ENST00000468796	PSMD1	Q99460	953 aa		11.21	□□□□□ -0.61
AGAP3-208	ENST00000468796	TMX4	Q9H1E5	349 aa	Predicted RBP	11.21	□□□□□ -0.61
AGAP3-208	ENST00000468796	SEC31B	Q9NQW1	1179 aa		11.21	□□□□□ -0.61
AGAP3-208	ENST00000468796	CACNA1F	O60840	1977 aa		11.21	□□□□□ -0.62
AGAP3-208	ENST00000468796	DICER1	Q9UPY3	1922 aa	Known RBP	11.21	□□□□□ -0.62
AGAP3-208	ENST00000468796	SNED1	Q8TER0	1413 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796	POTEC	B2RU33	542 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796		H7C1W4	665 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796	GCKR	Q14397	625 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796	MPND	Q8N594	471 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796	LAMB2	P55268	1798 aa		11.2	□□□□□ -0.62
AGAP3-208	ENST00000468796	ZNF541	Q9H0D2	1346 aa		11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	DDX60	Q8IY21	1712 aa	Known RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	TOMM70	O94826	608 aa		11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	HSP90B1	P14625	803 aa	Known RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	VEGFA	P15692	232 aa	Predicted RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	RPS8	P62241	208 aa	Known RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	GRIPAP1	Q4V328	841 aa		11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	DPP8	Q6V1X1	898 aa	Predicted RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	UBE3B	Q7Z3V4	1068 aa		11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	LARGE2	Q8N3Y3	721 aa		11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	MRPL50	Q8N5N7	158 aa	Known RBP	11.19	□□□□□ -0.62
AGAP3-208	ENST00000468796	CDHR2	Q9BYE9	1310 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	FZD9	O00144	591 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	PPIP5K2	O43314	1243 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	AOC3	Q16853	763 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	CCDC152	Q4G0S7	254 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	BEND3	Q5T5X7	828 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	TRMT2A	Q8IZ69	625 aa	Known RBP	11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	LINS1	Q8NG48	757 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	JDP2	Q8WYK2	163 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	SSH1	Q8WYL5	1049 aa		11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.18	□□□□□ -0.62
AGAP3-208	ENST00000468796	CASP7	P55210	303 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	CTSW	P56202	376 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	GPSM2	P81274	684 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	SLC4A10	Q6U841	1118 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	TMC4	Q7Z404	712 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	TTLL11	Q8NHH1	800 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	RBM46	Q8TBY0	533 aa	Known RBP	11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	BCL2L13	Q9BXK5	485 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	COL4A1	P02462	1669 aa		11.17	□□□□□ -0.62
AGAP3-208	ENST00000468796	EIF6	P56537	245 aa	Known RBP	11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	NIM1K	Q8IY84	436 aa		11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	SUPT20H	Q8NEM7	779 aa		11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	GPR101	Q96P66	508 aa	Predicted RBP	11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	GREM2	Q9H772	168 aa		11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	POLL	Q9UGP5	575 aa		11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	GJA3	Q9Y6H8	435 aa		11.16	□□□□□ -0.62
AGAP3-208	ENST00000468796	TIAM2	Q8IVF5	1701 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	COL4A5	P29400	1685 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	C6orf229	H3BNL8	230 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	RIMBP2	O15034	1052 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	HSPA6	P17066	643 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	ANKRD18A	Q8IVF6	992 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	PLA2G12B	Q9BX93	195 aa		11.15	□□□□□ -0.62
AGAP3-208	ENST00000468796	POTEI	P0CG38	1075 aa		11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	POTEJ	P0CG39	1038 aa		11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	KIAA2012	Q0VF49	1180 aa		11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	VPS33B	Q9H267	617 aa		11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	ZNRF3	Q9ULT6	936 aa		11.14	□□□□□ -0.63
AGAP3-208	ENST00000468796	ALDH1L1	O75891	902 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	CSF1R	P07333	972 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	FOXO4	P98177	505 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	CXCL9	Q07325	125 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	DOK7	Q18PE1	504 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	WASHC4	Q2M389	1173 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	FAM161A	Q3B820	660 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	EPHA10	Q5JZY3	1008 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	GPC2	Q8N158	579 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	SMC1B	Q8NDV3	1235 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	TBC1D16	Q8TBP0	767 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	CDC5L	Q99459	802 aa	Known RBP	11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	SRCIN1	Q9C0H9	1055 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	SMC4	Q9NTJ3	1288 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	ANKIB1	Q9P2G1	1089 aa		11.13	□□□□□ -0.63
AGAP3-208	ENST00000468796	WDR90	Q96KV7	1748 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	IQCA1L	A6NCM1	817 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	WTIP	A6NIX2	430 aa	Predicted RBP	11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	YDJC	A8MPS7	323 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	GRM8	O00222	908 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	RAD17	O75943	681 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	UFL1	O94874	794 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	ITGA6	P23229	1130 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	FSTL1	Q12841	308 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	ALDH1L2	Q3SY69	923 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	EAPP	Q56P03	285 aa	Predicted RBP	11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	DBNDD1	Q9H9R9	158 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	BSDC1	Q9NW68	430 aa	Predicted RBP	11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	HACL1	Q9UJ83	578 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	GGA1	Q9UJY5	639 aa		11.12	□□□□□ -0.63
AGAP3-208	ENST00000468796	MINPP1	Q9UNW1	487 aa		11.12	□□□□□ -0.63

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