RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
MSH5-214ENST00000468602 SYNE4Q8N205 404 aa14.12□□□□□ -0.15
MSH5-214ENST00000468602 SRGNP10124 158 aa14.11□□□□□ -0.15
MSH5-214ENST00000468602 GTF2E1P29083 439 aaPredicted RBP14.11□□□□□ -0.15
MSH5-214ENST00000468602 CCDC152Q4G0S7 254 aa14.11□□□□□ -0.15
MSH5-214ENST00000468602 EPHA10Q5JZY3 1008 aa14.11□□□□□ -0.15
MSH5-214ENST00000468602 ZNF784Q8NCA9 323 aaPredicted RBP14.11□□□□□ -0.15
MSH5-214ENST00000468602 SSH3Q8TE77 659 aa14.11□□□□□ -0.15
MSH5-214ENST00000468602 CRAMP1Q96RY5 1269 aa14.11□□□□□ -0.15
MSH5-214ENST00000468602 BICC1Q9H694 974 aaKnown RBP14.11□□□□□ -0.15
MSH5-214ENST00000468602 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
MSH5-214ENST00000468602 LRRFIP2Q9Y608 721 aaKnown RBP14.11□□□□□ -0.15
MSH5-214ENST00000468602 RFX5P48382 616 aaPredicted RBP14.1□□□□□ -0.15
MSH5-214ENST00000468602 STYK1Q6J9G0 422 aa14.1□□□□□ -0.15
MSH5-214ENST00000468602 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
MSH5-214ENST00000468602 EXOC6Q8TAG9 804 aa14.1□□□□□ -0.15
MSH5-214ENST00000468602 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
MSH5-214ENST00000468602 NPR1P16066 1061 aa14.09□□□□□ -0.15
MSH5-214ENST00000468602 HDAC1Q13547 482 aaPredicted RBP14.09□□□□□ -0.15
MSH5-214ENST00000468602 TMC4Q7Z404 712 aa14.09□□□□□ -0.15
MSH5-214ENST00000468602 COPRSQ9NQ92 184 aa14.09□□□□□ -0.15
MSH5-214ENST00000468602 BRCA1P38398 1863 aaKnown RBP14.09□□□□□ -0.15
MSH5-214ENST00000468602 UTRNP46939 3433 aa14.08□□□□□ -0.16
MSH5-214ENST00000468602 COL11A2P13942 1736 aaPredicted RBP14.08□□□□□ -0.16
MSH5-214ENST00000468602 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
MSH5-214ENST00000468602 C3orf67Q6ZVT6 689 aa14.08□□□□□ -0.16
MSH5-214ENST00000468602 SIRT2Q8IXJ6 389 aa14.08□□□□□ -0.16
MSH5-214ENST00000468602 MASTLQ96GX5 879 aa14.08□□□□□ -0.16
MSH5-214ENST00000468602 NOP58Q9Y2X3 529 aaKnown RBP14.08□□□□□ -0.16
MSH5-214ENST00000468602 NEFLP07196 543 aa14.07□□□□□ -0.16
MSH5-214ENST00000468602 KCNA3P22001 575 aa14.07□□□□□ -0.16
MSH5-214ENST00000468602 ALDH1B1P30837 517 aa14.07□□□□□ -0.16
MSH5-214ENST00000468602 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
MSH5-214ENST00000468602 FAM177BA6PVY3 158 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 H0YIN7 160 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 HMMRO75330 724 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 BBOX1O75936 387 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 PTPN12Q05209 780 aaKnown RBP14.06□□□□□ -0.16
MSH5-214ENST00000468602 GRAPQ13588 217 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 GRAPLQ8TC17 118 aaPredicted RBP14.06□□□□□ -0.16
MSH5-214ENST00000468602 JARID2Q92833 1246 aaPredicted RBP14.06□□□□□ -0.16
MSH5-214ENST00000468602 RBM17Q96I25 401 aaKnown RBP14.06□□□□□ -0.16
MSH5-214ENST00000468602 CDC5LQ99459 802 aaKnown RBP14.06□□□□□ -0.16
MSH5-214ENST00000468602 GREM2Q9H772 168 aa14.06□□□□□ -0.16
MSH5-214ENST00000468602 LRRC37AA6NMS7 1700 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 NPHP1O15259 732 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 CIAO1O76071 339 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 ITGA6P23229 1130 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 IFIT5Q13325 482 aaKnown RBP14.05□□□□□ -0.16
MSH5-214ENST00000468602 CCDC57Q2TAC2 916 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 GRIPAP1Q4V328 841 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
MSH5-214ENST00000468602 CNKSR1Q969H4 720 aa14.05□□□□□ -0.16
MSH5-214ENST00000468602 BSDC1Q9NW68 430 aaPredicted RBP14.05□□□□□ -0.16
MSH5-214ENST00000468602 ANKRD18BA2A2Z9 1011 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 ZBTB22O15209 634 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 SRGAP3O43295 1099 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 RPS8P62241 208 aaKnown RBP14.04□□□□□ -0.16
MSH5-214ENST00000468602 FAM161AQ3B820 660 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 DDX46Q7L014 1031 aaKnown RBP14.04□□□□□ -0.16
MSH5-214ENST00000468602 C7orf43Q8WVR3 580 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 DCTPP1Q9H773 170 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 SNED1Q8TER0 1413 aa14.04□□□□□ -0.16
MSH5-214ENST00000468602 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
MSH5-214ENST00000468602 C2CD5Q86YS7 1000 aa14.03□□□□□ -0.16
MSH5-214ENST00000468602 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
MSH5-214ENST00000468602 HSP90AB4PQ58FF6 505 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 SP8Q8IXZ3 490 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 SMC5Q8IY18 1101 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 SYT17Q9BSW7 474 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 C1orf115Q9H7X2 142 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 SEC31BQ9NQW1 1179 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 RIPOR2Q9Y4F9 1068 aa14.02□□□□□ -0.17
MSH5-214ENST00000468602 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 COL4A1P02462 1669 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 EYA2O00167 538 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 RAB11FIP3O75154 756 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 DPEP1P16444 411 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 ATG9AQ7Z3C6 839 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 ANKRD18AQ8IVF6 992 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 CCDC24Q8N4L8 307 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 CELF1Q92879 486 aaKnown RBP14.01□□□□□ -0.17
MSH5-214ENST00000468602 GCC1Q96CN9 775 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 RWDD1Q9H446 243 aaPredicted RBP14.01□□□□□ -0.17
MSH5-214ENST00000468602 GPR108Q9NPR9 543 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 PODXL2Q9NZ53 605 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 PIM2Q9P1W9 311 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 LTBP1Q14766 1721 aa14.01□□□□□ -0.17
MSH5-214ENST00000468602 SLX4Q8IY92 1834 aa14□□□□□ -0.17
MSH5-214ENST00000468602 IGHMBP2P38935 993 aaKnown RBP14□□□□□ -0.17
MSH5-214ENST00000468602 IL15P40933 162 aaPredicted RBP14□□□□□ -0.17
MSH5-214ENST00000468602 TTLL6Q8N841 843 aa14□□□□□ -0.17
MSH5-214ENST00000468602 VGLL2Q8N8G2 317 aa14□□□□□ -0.17
MSH5-214ENST00000468602 FHDC1Q9C0D6 1143 aaPredicted RBP14□□□□□ -0.17
MSH5-214ENST00000468602 ATP6V0A2Q9Y487 856 aa14□□□□□ -0.17
MSH5-214ENST00000468602 MROH5Q6ZUA9 1318 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 KDM2BQ8NHM5 1336 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 CHRNA5P30532 468 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 IRX6P78412 446 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms