RNA–Protein interactions for RNA: ENST00000467331.5

APTX-214, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-214ENST00000467331 DDX21Q9NR30 783 aaKnown RBP eCLIP11.51□□□□□ -0.57
APTX-214ENST00000467331 KCNJ4P48050 445 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 SPATA32Q96LK8 384 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 ZSCAN16Q9H4T2 348 aaPredicted RBP11.5□□□□□ -0.57
APTX-214ENST00000467331 BCL2L12Q9HB09 334 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 PA2G4Q9UQ80 394 aaKnown RBP11.5□□□□□ -0.57
APTX-214ENST00000467331 A0A0D9SFI3 127 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 LLPHQ9BRT6 129 aaKnown RBP11.5□□□□□ -0.57
APTX-214ENST00000467331 CBX8Q9HC52 389 aa11.5□□□□□ -0.57
APTX-214ENST00000467331 SCN11AQ9UI33 1791 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 C5P01031 1676 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 TAF5LO75529 589 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 ZNF75DP51815 510 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 RESTQ13127 1097 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 NUTM2GQ5VZR2 741 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 C17orf53Q8N3J3 647 aaPredicted RBP11.49□□□□□ -0.57
APTX-214ENST00000467331 GTF3C6Q969F1 213 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 FSD1Q9BTV5 496 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 BICC1Q9H694 974 aaKnown RBP11.49□□□□□ -0.57
APTX-214ENST00000467331 DACT1Q9NYF0 836 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 MST1RQ04912 1400 aa11.49□□□□□ -0.57
APTX-214ENST00000467331 CTAGE5O15320 804 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 ATP5JP18859 108 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 ATL3Q6DD88 541 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 GOLGA6L4A6NEF3 574 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
APTX-214ENST00000467331 NEMFO60524 1076 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 ANXA1P04083 346 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 DMTNQ08495 405 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 CWF19L2Q2TBE0 894 aaKnown RBP11.48□□□□□ -0.57
APTX-214ENST00000467331 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
APTX-214ENST00000467331 COPRSQ9NQ92 184 aa11.48□□□□□ -0.57
APTX-214ENST00000467331 SMTNL1A8MU46 457 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 PTGS1P23219 599 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 PDIA6Q15084 440 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 ANO6Q4KMQ2 910 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 SMARCC2Q8TAQ2 1214 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 CFAP45Q9UL16 551 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
APTX-214ENST00000467331 NAA16Q6N069 864 aaPredicted RBP11.47□□□□□ -0.57
APTX-214ENST00000467331 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 LUZP1Q86V48 1076 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 ARHGEF25Q86VW2 580 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 MPNDQ8N594 471 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
APTX-214ENST00000467331 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
APTX-214ENST00000467331 SPEF2Q9C093 1822 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 LAMA4Q16363 1823 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 IGKV5-2P06315 115 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 HMGB1P09429 215 aaKnown RBP11.46□□□□□ -0.57
APTX-214ENST00000467331 CEBPAP49715 358 aaPredicted RBP11.46□□□□□ -0.57
APTX-214ENST00000467331 PLCB2Q00722 1185 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 ZSCAN25Q6NSZ9 544 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 SPC24Q8NBT2 197 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 MRFAP1L1Q96HT8 127 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 FEZ1Q99689 392 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
APTX-214ENST00000467331 KCND1Q9NSA2 647 aa11.46□□□□□ -0.57
APTX-214ENST00000467331 TLR7Q9NYK1 1049 aaKnown RBP11.46□□□□□ -0.57
APTX-214ENST00000467331 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
APTX-214ENST00000467331 NEURL1BA8MQ27 555 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 RABL6Q3YEC7 729 aaPredicted RBP11.45□□□□□ -0.58
APTX-214ENST00000467331 ZNF589Q86UQ0 364 aaPredicted RBP11.45□□□□□ -0.58
APTX-214ENST00000467331 FERMT3Q86UX7 667 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 CHMP4CQ96CF2 233 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 NEK1Q96PY6 1258 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 BOLA2Q9H3K6 86 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.45□□□□□ -0.58
APTX-214ENST00000467331 PALLDQ8WX93 1383 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
APTX-214ENST00000467331 ZNF165P49910 485 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 NEXNQ0ZGT2 675 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 GCKRQ14397 625 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 CCDC186Q7Z3E2 898 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 METTL22Q9BUU2 404 aaPredicted RBP11.45□□□□□ -0.58
APTX-214ENST00000467331 AGXT2Q9BYV1 514 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 RCOR1Q9UKL0 485 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 ZNF609O15014 1411 aa11.45□□□□□ -0.58
APTX-214ENST00000467331 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
APTX-214ENST00000467331 LAMB4A4D0S4 1761 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 PFKFB2O60825 505 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 NR1I2O75469 434 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 RFX5P48382 616 aaPredicted RBP11.44□□□□□ -0.58
APTX-214ENST00000467331 RBM6P78332 1123 aaKnown RBP11.44□□□□□ -0.58
APTX-214ENST00000467331 IQCB1Q15051 598 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 BRF1Q92994 677 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 TRIM5Q9C035 493 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 KIF1AQ12756 1690 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 ARFGEF2Q9Y6D5 1785 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 COL9A3Q14050 684 aaPredicted RBP11.44□□□□□ -0.58
APTX-214ENST00000467331 CAMK4Q16566 473 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 STX1AQ16623 288 aa11.44□□□□□ -0.58
APTX-214ENST00000467331 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms