RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 NBPF26B4DH59 902 aa17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 NBPF14Q5TI25 921 aa17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 NBPF10Q6P3W6 841 aaKnown RBP17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 NBPF15Q8N660 670 aa17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 COL15A1P39059 1388 aa17.61■□□□□ 0.41
PRPF38B-204ENST00000467302 NECTIN1Q15223 517 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 EVI5LQ96CN4 794 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 SH2B1Q9NRF2 756 aaPredicted RBP17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 PDRG1Q9NUG6 133 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 MTMR6Q9Y217 621 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 NWD2Q9ULI1 1742 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 PRPF40BQ6NWY9 871 aaKnown RBP17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 GPATCH3Q96I76 525 aa17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRPF38B-204ENST00000467302 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 GJB2P29033 226 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 ST3GAL1Q11201 340 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 G3BP1Q13283 466 aaKnown RBP eCLIP17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 CCDC83Q8IWF9 413 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 CYP46A1Q9Y6A2 500 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 A1BGP04217 495 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 PTMAP06454 111 aaKnown RBP17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 FUCA2Q9BTY2 467 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 CDCA7Q9BWT1 371 aaPredicted RBP17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
PRPF38B-204ENST00000467302 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.41
PRPF38B-204ENST00000467302 ATP5J2-PTCD1G3V325 749 aa17.58■□□□□ 0.4
PRPF38B-204ENST00000467302 TOM1O60784 492 aa17.58■□□□□ 0.4
PRPF38B-204ENST00000467302 FIBPO43427 364 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 KIAA2012Q0VF49 1180 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 PIGBQ92521 554 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 USP25Q9UHP3 1055 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 TJP1Q07157 1748 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 A0A087WZG4 1122 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 UQCRHLA0A096LP55 91 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 EXOC5O00471 708 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 UQCRHP07919 91 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 HCLS1P14317 486 aaPredicted RBP17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 DNM1Q05193 864 aaKnown RBP17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 ME3Q16798 604 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 AACSQ86V21 672 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 BCL9O00512 1426 aa17.57■□□□□ 0.4
PRPF38B-204ENST00000467302 DOT1LQ8TEK3 1739 aa17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 SASH1O94885 1247 aa17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 CREB3L3Q68CJ9 461 aa17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 TTLL7Q6ZT98 887 aa17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
PRPF38B-204ENST00000467302 ADCY5O95622 1261 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 ZKSCAN1P17029 563 aaPredicted RBP17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 SASS6Q6UVJ0 657 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 UBE3BQ7Z3V4 1068 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 HIP1O00291 1037 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 ADAMTS2O95450 1211 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 EAF2Q96CJ1 260 aaPredicted RBP17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 FAM227BQ96M60 508 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 TPCN1Q9ULQ1 816 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 SPATA31A1Q5TZJ5 1347 aa17.55■□□□□ 0.4
PRPF38B-204ENST00000467302 KDM4AO75164 1064 aa17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 ASAP1Q9ULH1 1129 aa17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 DYNC1I1O14576 645 aa17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 NMIQ13287 307 aaPredicted RBP17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 RABL6Q3YEC7 729 aaPredicted RBP17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 SIL1Q9H173 461 aa17.54■□□□□ 0.4
PRPF38B-204ENST00000467302 SLC27A2O14975 620 aa17.53■□□□□ 0.4
PRPF38B-204ENST00000467302 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
PRPF38B-204ENST00000467302 PIBF1Q8WXW3 757 aa17.53■□□□□ 0.4
PRPF38B-204ENST00000467302 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.53■□□□□ 0.4
PRPF38B-204ENST00000467302 SLIT2O94813 1529 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 H7C1W4 665 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 DTNBO60941 627 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 CASP7P55210 303 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 RBM10P98175 930 aaKnown RBP17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 COL9A3Q14050 684 aaPredicted RBP17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 GIMAP6Q6P9H5 292 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 NECAB1Q8N987 351 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 CWC25Q9NXE8 425 aaPredicted RBP17.52■□□□□ 0.4
PRPF38B-204ENST00000467302 STARD3NLO95772 234 aa17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 PSMA5P28066 241 aa17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 PIP4K2BP78356 416 aa17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 KLHDC4Q8TBB5 520 aa17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 ALDH8A1Q9H2A2 487 aaPredicted RBP17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 ZBTB3Q9H5J0 574 aa17.52■□□□□ 0.39
PRPF38B-204ENST00000467302 TPRNQ4KMQ1 711 aa17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 DNAJC10Q8IXB1 793 aa17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 ZNF830Q96NB3 372 aaPredicted RBP17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 MAP7D2Q96T17 732 aa17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 CCDC8Q9H0W5 538 aaPredicted RBP17.51■□□□□ 0.39
PRPF38B-204ENST00000467302 TLR7Q9NYK1 1049 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms