RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 MICAL2O94851 1124 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 MAP3K6O95382 1288 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 SELPP16109 830 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 RFX1P22670 979 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 FKBP5Q13451 457 aaPredicted RBP7.33□□□□□ -1.24
CCDC58-203ENST00000466854 C11orf91Q3C1V1 193 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 NKAPLQ5M9Q1 402 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 IFT43Q96FT9 208 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 KRTAP4-9Q9BYQ8 210 aa7.33□□□□□ -1.24
CCDC58-203ENST00000466854 ZBTB42B2RXF5 422 aa7.32□□□□□ -1.24
CCDC58-203ENST00000466854 OPLAHO14841 1288 aa7.32□□□□□ -1.24
CCDC58-203ENST00000466854 TARSP26639 723 aaKnown RBP7.32□□□□□ -1.24
CCDC58-203ENST00000466854 KRT25Q7Z3Z0 450 aa7.32□□□□□ -1.24
CCDC58-203ENST00000466854 NACC1Q96RE7 527 aa7.32□□□□□ -1.24
CCDC58-203ENST00000466854 USP20Q9Y2K6 914 aa7.32□□□□□ -1.24
CCDC58-203ENST00000466854 ELNP15502 786 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 PLAURQ03405 335 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 FAM69CQ0P6D2 419 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 GRIK5Q16478 980 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 OCLNQ16625 522 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 COX20Q5RI15 118 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 DHX32Q7L7V1 743 aaKnown RBP7.31□□□□□ -1.24
CCDC58-203ENST00000466854 FAM35AQ86V20 835 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 TRPM4Q8TD43 1214 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 VTI1AQ96AJ9 217 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 PRIMPOLQ96LW4 560 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 LPIN3Q9BQK8 851 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 C11orf16Q9NQ32 467 aa7.31□□□□□ -1.24
CCDC58-203ENST00000466854 RGS9O75916 674 aaPredicted RBP7.3□□□□□ -1.24
CCDC58-203ENST00000466854 SASH3O75995 380 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 CPB1P15086 417 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 SRPK2P78362 688 aaKnown RBP7.3□□□□□ -1.24
CCDC58-203ENST00000466854 ADGRE1Q14246 886 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 MBTPS1Q14703 1052 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 GOLGA2P5Q9HBQ8 144 aa7.3□□□□□ -1.24
CCDC58-203ENST00000466854 RTCBQ9Y3I0 505 aaKnown RBP7.3□□□□□ -1.24
CCDC58-203ENST00000466854 ACIN1Q9UKV3 1341 aaKnown RBP7.29□□□□□ -1.24
CCDC58-203ENST00000466854 PRMT3O60678 531 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 RARAP10276 462 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 GPLD1P80108 840 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 MLLT1Q03111 559 aaPredicted RBP7.29□□□□□ -1.24
CCDC58-203ENST00000466854 ELOAQ14241 798 aaKnown RBP7.29□□□□□ -1.24
CCDC58-203ENST00000466854 PERM1Q5SV97 790 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 TREML1Q86YW5 311 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 DMRTC2Q8IXT2 367 aaPredicted RBP7.29□□□□□ -1.24
CCDC58-203ENST00000466854 FMR1NBQ8N0W7 255 aaPredicted RBP7.29□□□□□ -1.24
CCDC58-203ENST00000466854 STK32AQ8WU08 396 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
CCDC58-203ENST00000466854 C9orf172C9J069 976 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 DYRK3O43781 588 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 EGFRP00533 1210 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 RAC1P63000 192 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 PCSK7Q16549 785 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 FAM26DQ5JW98 314 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 LENG1Q96BZ8 264 aaPredicted RBP7.28□□□□□ -1.24
CCDC58-203ENST00000466854 SAP130Q9H0E3 1048 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
CCDC58-203ENST00000466854 FOXD4L6Q3SYB3 417 aaPredicted RBP7.27□□□□□ -1.25
CCDC58-203ENST00000466854 MSL1Q68DK7 614 aa7.27□□□□□ -1.25
CCDC58-203ENST00000466854 FOXD4L3Q6VB84 417 aaPredicted RBP7.27□□□□□ -1.25
CCDC58-203ENST00000466854 KRTAP19-1Q8IUB9 90 aa7.27□□□□□ -1.25
CCDC58-203ENST00000466854 ETFBKMTQ8IXQ9 262 aa7.27□□□□□ -1.25
CCDC58-203ENST00000466854 RGL4Q8IZJ4 473 aa7.27□□□□□ -1.25
CCDC58-203ENST00000466854 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.26□□□□□ -1.25
CCDC58-203ENST00000466854 XYLBO75191 536 aa7.26□□□□□ -1.25
CCDC58-203ENST00000466854 NRLP54845 237 aa7.26□□□□□ -1.25
CCDC58-203ENST00000466854 CAPN12Q6ZSI9 719 aa7.26□□□□□ -1.25
CCDC58-203ENST00000466854 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCDC58-203ENST00000466854 TLR7Q9NYK1 1049 aaKnown RBP7.26□□□□□ -1.25
CCDC58-203ENST00000466854 ELMSAN1Q6PJG2 1045 aa7.25□□□□□ -1.25
CCDC58-203ENST00000466854 HFE2Q6ZVN8 426 aa7.25□□□□□ -1.25
CCDC58-203ENST00000466854 TXNRD3Q86VQ6 643 aa7.25□□□□□ -1.25
CCDC58-203ENST00000466854 CMTR1Q8N1G2 835 aaKnown RBP7.25□□□□□ -1.25
CCDC58-203ENST00000466854 TTC9Q92623 222 aa7.25□□□□□ -1.25
CCDC58-203ENST00000466854 TNFRSF10BO14763 440 aa7.24□□□□□ -1.25
CCDC58-203ENST00000466854 MMP20O60882 483 aa7.24□□□□□ -1.25
CCDC58-203ENST00000466854 NRG1Q02297 640 aaPredicted RBP7.24□□□□□ -1.25
CCDC58-203ENST00000466854 TRIP4Q15650 581 aaPredicted RBP7.24□□□□□ -1.25
CCDC58-203ENST00000466854 ZMYM1Q5SVZ6 1142 aa7.24□□□□□ -1.25
CCDC58-203ENST00000466854 DTWD1Q8N5C7 304 aa7.24□□□□□ -1.25
CCDC58-203ENST00000466854 SSBP4Q9BWG4 385 aaPredicted RBP7.24□□□□□ -1.25
CCDC58-203ENST00000466854 SMG9Q9H0W8 520 aaKnown RBP7.24□□□□□ -1.25
CCDC58-203ENST00000466854 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
CCDC58-203ENST00000466854 ATG7O95352 703 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 EIF2AK2P19525 551 aaKnown RBP7.23□□□□□ -1.25
CCDC58-203ENST00000466854 TMEM164Q5U3C3 297 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 C16orf46Q6P387 395 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 FBXO11Q86XK2 927 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 MKNK1Q9BUB5 465 aa7.23□□□□□ -1.25
CCDC58-203ENST00000466854 J3QW42 95 aa7.22□□□□□ -1.25
CCDC58-203ENST00000466854 DEAF1O75398 565 aaPredicted RBP7.22□□□□□ -1.25
CCDC58-203ENST00000466854 HOXD8P13378 290 aaPredicted RBP7.22□□□□□ -1.25
CCDC58-203ENST00000466854 PRSS36Q5K4E3 855 aa7.22□□□□□ -1.25
CCDC58-203ENST00000466854 WFDC8Q8IUA0 241 aa7.22□□□□□ -1.25
CCDC58-203ENST00000466854 SLAIN2Q9P270 581 aa7.22□□□□□ -1.25
CCDC58-203ENST00000466854 USP21Q9UK80 565 aa7.22□□□□□ -1.25
CCDC58-203ENST00000466854 H2AFB1P0C5Y9 115 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms