RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 ARHGAP45Q92619 1136 aa17.55■□□□□ 0.4
UBA3-209ENST00000466763 CLUAP1Q96AJ1 413 aa17.55■□□□□ 0.4
UBA3-209ENST00000466763 CDHR2Q9BYE9 1310 aa17.54■□□□□ 0.4
UBA3-209ENST00000466763 GRM8O00222 908 aa17.54■□□□□ 0.4
UBA3-209ENST00000466763 C21orf2O43822 256 aa17.54■□□□□ 0.4
UBA3-209ENST00000466763 CCT4P50991 539 aaKnown RBP17.54■□□□□ 0.4
UBA3-209ENST00000466763 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
UBA3-209ENST00000466763 TNNQ9UQP3 1299 aa17.54■□□□□ 0.4
UBA3-209ENST00000466763 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
UBA3-209ENST00000466763 LAMB2P55268 1798 aa17.53■□□□□ 0.4
UBA3-209ENST00000466763 HOXA10P31260 410 aaPredicted RBP17.53■□□□□ 0.4
UBA3-209ENST00000466763 SLX4Q8IY92 1834 aa17.53■□□□□ 0.4
UBA3-209ENST00000466763 TRIM27P14373 513 aa17.52■□□□□ 0.4
UBA3-209ENST00000466763 SF3B3Q15393 1217 aaKnown RBP17.52■□□□□ 0.4
UBA3-209ENST00000466763 CCDC152Q4G0S7 254 aa17.52■□□□□ 0.4
UBA3-209ENST00000466763 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
UBA3-209ENST00000466763 CHMP3Q9Y3E7 222 aa17.52■□□□□ 0.4
UBA3-209ENST00000466763 ABCC4O15439 1325 aa17.51■□□□□ 0.39
UBA3-209ENST00000466763 CTSWP56202 376 aa17.51■□□□□ 0.39
UBA3-209ENST00000466763 FTSJ3Q8IY81 847 aaKnown RBP17.51■□□□□ 0.39
UBA3-209ENST00000466763 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
UBA3-209ENST00000466763 ARFGEF1Q9Y6D6 1849 aa17.51■□□□□ 0.39
UBA3-209ENST00000466763 PPEF1O14829 653 aaPredicted RBP17.5■□□□□ 0.39
UBA3-209ENST00000466763 CASP7P55210 303 aa17.5■□□□□ 0.39
UBA3-209ENST00000466763 GRAPQ13588 217 aa17.5■□□□□ 0.39
UBA3-209ENST00000466763 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
UBA3-209ENST00000466763 TAF1P21675 1872 aa17.5■□□□□ 0.39
UBA3-209ENST00000466763 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
UBA3-209ENST00000466763 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
UBA3-209ENST00000466763 DZIP1LQ8IYY4 767 aaKnown RBP17.49■□□□□ 0.39
UBA3-209ENST00000466763 TTLL11Q8NHH1 800 aa17.49■□□□□ 0.39
UBA3-209ENST00000466763 SEC31BQ9NQW1 1179 aa17.49■□□□□ 0.39
UBA3-209ENST00000466763 MYH3P11055 1940 aa17.49■□□□□ 0.39
UBA3-209ENST00000466763 PLIN1O60240 522 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 BBOX1O75936 387 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 SOGA3Q5TF21 947 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
UBA3-209ENST00000466763 SUCLG2Q96I99 432 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 PLA2G12BQ9BX93 195 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 USP44Q9H0E7 712 aa17.48■□□□□ 0.39
UBA3-209ENST00000466763 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
UBA3-209ENST00000466763 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
UBA3-209ENST00000466763 INTS3Q68E01 1043 aaKnown RBP17.47■□□□□ 0.39
UBA3-209ENST00000466763 LMBR1LQ6UX01 489 aa17.47■□□□□ 0.39
UBA3-209ENST00000466763 TMEM57Q8N5G2 664 aa17.47■□□□□ 0.39
UBA3-209ENST00000466763 GREM2Q9H772 168 aa17.47■□□□□ 0.39
UBA3-209ENST00000466763 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
UBA3-209ENST00000466763 FOXO4P98177 505 aa17.46■□□□□ 0.39
UBA3-209ENST00000466763 RASSF7Q02833 373 aa17.46■□□□□ 0.39
UBA3-209ENST00000466763 EPHA10Q5JZY3 1008 aa17.46■□□□□ 0.39
UBA3-209ENST00000466763 ANKRD18AQ8IVF6 992 aa17.46■□□□□ 0.39
UBA3-209ENST00000466763 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
UBA3-209ENST00000466763 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
UBA3-209ENST00000466763 ITGA6P23229 1130 aa17.45■□□□□ 0.38
UBA3-209ENST00000466763 FAM161AQ3B820 660 aa17.45■□□□□ 0.38
UBA3-209ENST00000466763 SLC51AQ86UW1 340 aa17.45■□□□□ 0.38
UBA3-209ENST00000466763 ITPRIPQ8IWB1 547 aa17.45■□□□□ 0.38
UBA3-209ENST00000466763 CDC5LQ99459 802 aaKnown RBP17.45■□□□□ 0.38
UBA3-209ENST00000466763 UTYO14607 1347 aa17.45■□□□□ 0.38
UBA3-209ENST00000466763 ANKRD18BA2A2Z9 1011 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 CSF1RP07333 972 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 MS4A1P11836 297 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 TAF7LQ5H9L4 462 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 CC2D2BQ6DHV5 1058 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 SP8Q8IXZ3 490 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 RTKN2Q8IZC4 609 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 MEIS3Q99687 375 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 BICC1Q9H694 974 aaKnown RBP17.44■□□□□ 0.38
UBA3-209ENST00000466763 ATP6V0A2Q9Y487 856 aa17.44■□□□□ 0.38
UBA3-209ENST00000466763 CHD4Q14839 1912 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 NFKBIEO00221 500 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 GNAI3P08754 354 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 RLBP1P12271 317 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 IGHMBP2P38935 993 aaKnown RBP17.43■□□□□ 0.38
UBA3-209ENST00000466763 IFIT5Q13325 482 aaKnown RBP17.43■□□□□ 0.38
UBA3-209ENST00000466763 CCDC57Q2TAC2 916 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 TMC4Q7Z404 712 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 HDAC5Q9UQL6 1122 aa17.43■□□□□ 0.38
UBA3-209ENST00000466763 KAZALD1Q96I82 304 aa17.42■□□□□ 0.38
UBA3-209ENST00000466763 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
UBA3-209ENST00000466763 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
UBA3-209ENST00000466763 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
UBA3-209ENST00000466763 DPP8Q6V1X1 898 aaPredicted RBP17.41■□□□□ 0.38
UBA3-209ENST00000466763 MPNDQ8N594 471 aa17.41■□□□□ 0.38
UBA3-209ENST00000466763 MPHOSPH8Q99549 860 aa17.41■□□□□ 0.38
UBA3-209ENST00000466763 LRRFIP2Q9Y608 721 aaKnown RBP17.41■□□□□ 0.38
UBA3-209ENST00000466763 RTL9Q8NET4 1388 aa17.4■□□□□ 0.38
UBA3-209ENST00000466763 CCDC88AQ3V6T2 1871 aa17.4■□□□□ 0.38
UBA3-209ENST00000466763 LMNB1P20700 586 aa17.4■□□□□ 0.38
UBA3-209ENST00000466763 YY1P25490 414 aa17.4■□□□□ 0.38
UBA3-209ENST00000466763 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
UBA3-209ENST00000466763 ZNF277Q9NRM2 450 aaPredicted RBP17.4■□□□□ 0.38
UBA3-209ENST00000466763 NSFL1CQ9UNZ2 370 aaKnown RBP17.4■□□□□ 0.38
UBA3-209ENST00000466763 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
UBA3-209ENST00000466763 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
UBA3-209ENST00000466763 COL4A1P02462 1669 aa17.39■□□□□ 0.37
UBA3-209ENST00000466763 GRIPAP1Q4V328 841 aa17.39■□□□□ 0.37
UBA3-209ENST00000466763 ANKRD44Q8N8A2 993 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms