RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 SMC1BQ8NDV3 1235 aa20.39■□□□□ 0.85
CRAMP1-204ENST00000466562 DDX60Q8IY21 1712 aaKnown RBP20.39■□□□□ 0.85
CRAMP1-204ENST00000466562 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
CRAMP1-204ENST00000466562 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
CRAMP1-204ENST00000466562 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
CRAMP1-204ENST00000466562 L3MBTL3Q96JM7 780 aaPredicted RBP20.38■□□□□ 0.85
CRAMP1-204ENST00000466562 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
CRAMP1-204ENST00000466562 ZNF521Q96K83 1311 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 APLP1P51693 650 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 FLIIQ13045 1269 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 TMC4Q7Z404 712 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 MPNDQ8N594 471 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 RTFDC1Q9BY42 306 aaPredicted RBP20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 COL4A5P29400 1685 aa20.37■□□□□ 0.85
CRAMP1-204ENST00000466562 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
CRAMP1-204ENST00000466562 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
CRAMP1-204ENST00000466562 DPP8Q6V1X1 898 aaPredicted RBP20.36■□□□□ 0.85
CRAMP1-204ENST00000466562 SUPT20HQ8NEM7 779 aa20.36■□□□□ 0.85
CRAMP1-204ENST00000466562 VPS33BQ9H267 617 aa20.36■□□□□ 0.85
CRAMP1-204ENST00000466562 IQCA1LA6NCM1 817 aa20.35■□□□□ 0.85
CRAMP1-204ENST00000466562 PPIP5K2O43314 1243 aa20.35■□□□□ 0.85
CRAMP1-204ENST00000466562 PDE8AO60658 829 aa20.35■□□□□ 0.85
CRAMP1-204ENST00000466562 AOC3Q16853 763 aa20.35■□□□□ 0.85
CRAMP1-204ENST00000466562 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
CRAMP1-204ENST00000466562 CWF19L2Q2TBE0 894 aaKnown RBP20.34■□□□□ 0.85
CRAMP1-204ENST00000466562 GPC2Q8N158 579 aa20.34■□□□□ 0.85
CRAMP1-204ENST00000466562 CDHR2Q9BYE9 1310 aa20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 NEURL1BA8MQ27 555 aa20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 RPS8P62241 208 aaKnown RBP20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 NIM1KQ8IY84 436 aa20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 TAF1DQ9H5J8 278 aaPredicted RBP20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 SEC31BQ9NQW1 1179 aa20.33■□□□□ 0.85
CRAMP1-204ENST00000466562 POTEIP0CG38 1075 aa20.32■□□□□ 0.84
CRAMP1-204ENST00000466562 POTEJP0CG39 1038 aa20.32■□□□□ 0.84
CRAMP1-204ENST00000466562 COL4A1P02462 1669 aa20.32■□□□□ 0.84
CRAMP1-204ENST00000466562 TAF1P21675 1872 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 HACL1Q9UJ83 578 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 GJA3Q9Y6H8 435 aa20.31■□□□□ 0.84
CRAMP1-204ENST00000466562 H7C1W4 665 aa20.3■□□□□ 0.84
CRAMP1-204ENST00000466562 CCER2I3L3R5 266 aa20.3■□□□□ 0.84
CRAMP1-204ENST00000466562 CCDC85AQ96PX6 553 aaPredicted RBP20.3■□□□□ 0.84
CRAMP1-204ENST00000466562 NSFL1CQ9UNZ2 370 aaKnown RBP20.3■□□□□ 0.84
CRAMP1-204ENST00000466562 HTRA3P83110 453 aa20.29■□□□□ 0.84
CRAMP1-204ENST00000466562 CHADLQ6NUI6 762 aa20.29■□□□□ 0.84
CRAMP1-204ENST00000466562 ZNRF3Q9ULT6 936 aa20.29■□□□□ 0.84
CRAMP1-204ENST00000466562 EPHX2P34913 555 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 CTSWP56202 376 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 GPSM2P81274 684 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 GCKRQ14397 625 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 DNAJC5GQ8N7S2 189 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 DUOX1Q9NRD9 1551 aa20.28■□□□□ 0.84
CRAMP1-204ENST00000466562 LRRC37AA6NMS7 1700 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 SCN4AP35499 1836 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 CXCL9Q07325 125 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 UBE3BQ7Z3V4 1068 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 TTLL11Q8NHH1 800 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 POLLQ9UGP5 575 aa20.27■□□□□ 0.84
CRAMP1-204ENST00000466562 E9PSI1 815 aa20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 F6X3S4 739 aa20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 SCNN1DP51172 638 aa20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 WASHC4Q2M389 1173 aa20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 EAPPQ56P03 285 aaPredicted RBP20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 PNMA8AQ86V59 439 aaPredicted RBP20.26■□□□□ 0.83
CRAMP1-204ENST00000466562 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
CRAMP1-204ENST00000466562 CASP7P55210 303 aa20.25■□□□□ 0.83
CRAMP1-204ENST00000466562 ANKRD18AQ8IVF6 992 aa20.25■□□□□ 0.83
CRAMP1-204ENST00000466562 TBC1D16Q8TBP0 767 aa20.25■□□□□ 0.83
CRAMP1-204ENST00000466562 PODXL2Q9NZ53 605 aa20.25■□□□□ 0.83
CRAMP1-204ENST00000466562 LMOD1P29536 600 aaPredicted RBP20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 EPS15P42566 896 aa20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 SLFN5Q08AF3 891 aa20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 PLA2G12BQ9BX93 195 aa20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 GREM2Q9H772 168 aa20.24■□□□□ 0.83
CRAMP1-204ENST00000466562 YDJCA8MPS7 323 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 CIAPIN1Q6FI81 312 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 CDC5LQ99459 802 aaKnown RBP20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 EYA3Q99504 573 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 CLEC11AQ9Y240 323 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
CRAMP1-204ENST00000466562 RTL9Q8NET4 1388 aa20.22■□□□□ 0.83
CRAMP1-204ENST00000466562 RAD17O75943 681 aa20.22■□□□□ 0.83
CRAMP1-204ENST00000466562 CDCA7LQ96GN5 454 aa20.22■□□□□ 0.83
CRAMP1-204ENST00000466562 GPR101Q96P66 508 aaPredicted RBP20.22■□□□□ 0.83
CRAMP1-204ENST00000466562 ANKIB1Q9P2G1 1089 aa20.22■□□□□ 0.83
CRAMP1-204ENST00000466562 TNIP1Q15025 636 aa20.21■□□□□ 0.83
CRAMP1-204ENST00000466562 DBNDD1Q9H9R9 158 aa20.21■□□□□ 0.83
CRAMP1-204ENST00000466562 GPRC5DQ9NZD1 345 aa20.21■□□□□ 0.83
CRAMP1-204ENST00000466562 GGA1Q9UJY5 639 aa20.21■□□□□ 0.83
CRAMP1-204ENST00000466562 LTBP1Q14766 1721 aa20.21■□□□□ 0.83
CRAMP1-204ENST00000466562 UFL1O94874 794 aa20.2■□□□□ 0.82
CRAMP1-204ENST00000466562 ITGBL1O95965 494 aaPredicted RBP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms