RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 DALRD3Q5D0E6 543 aaKnown RBP12.46□□□□□ -0.41
PMF1-204ENST00000466489 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 STYK1Q6J9G0 422 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 UBE3BQ7Z3V4 1068 aa12.46□□□□□ -0.41
PMF1-204ENST00000466489 KDM2BQ8NHM5 1336 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 GRM8O00222 908 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 GRIN3BO60391 1043 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 PDE8AO60658 829 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 SRGNP10124 158 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 CHRNA5P30532 468 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 DDX46Q7L014 1031 aaKnown RBP12.45□□□□□ -0.42
PMF1-204ENST00000466489 TTLL6Q8N841 843 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 RBM17Q96I25 401 aaKnown RBP12.45□□□□□ -0.42
PMF1-204ENST00000466489 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
PMF1-204ENST00000466489 HCLS1P14317 486 aaPredicted RBP12.44□□□□□ -0.42
PMF1-204ENST00000466489 CCDC152Q4G0S7 254 aa12.44□□□□□ -0.42
PMF1-204ENST00000466489 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
PMF1-204ENST00000466489 BCS1LQ9Y276 419 aa12.44□□□□□ -0.42
PMF1-204ENST00000466489 KLRG2A4D1S0 409 aaPredicted RBP12.43□□□□□ -0.42
PMF1-204ENST00000466489 H7C1W4 665 aa12.43□□□□□ -0.42
PMF1-204ENST00000466489 TRIM27P14373 513 aa12.43□□□□□ -0.42
PMF1-204ENST00000466489 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
PMF1-204ENST00000466489 DZIP1LQ8IYY4 767 aaKnown RBP12.43□□□□□ -0.42
PMF1-204ENST00000466489 CRBNQ96SW2 442 aa12.43□□□□□ -0.42
PMF1-204ENST00000466489 ABCC4O15439 1325 aa12.42□□□□□ -0.42
PMF1-204ENST00000466489 CTSWP56202 376 aa12.42□□□□□ -0.42
PMF1-204ENST00000466489 TMC4Q7Z404 712 aa12.42□□□□□ -0.42
PMF1-204ENST00000466489 CRAMP1Q96RY5 1269 aa12.42□□□□□ -0.42
PMF1-204ENST00000466489 RWDD1Q9H446 243 aaPredicted RBP12.42□□□□□ -0.42
PMF1-204ENST00000466489 GNAI3P08754 354 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 HOXA10P31260 410 aaPredicted RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 SF3B3Q15393 1217 aaKnown RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 INTS3Q68E01 1043 aaKnown RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 PRPF40BQ6NWY9 871 aaKnown RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 SYNE4Q8N205 404 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 CDC5LQ99459 802 aaKnown RBP12.41□□□□□ -0.42
PMF1-204ENST00000466489 PLA2G12BQ9BX93 195 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 WWC3Q9ULE0 1092 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 CHMP3Q9Y3E7 222 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 CHD4Q14839 1912 aa12.41□□□□□ -0.42
PMF1-204ENST00000466489 SLX4Q8IY92 1834 aa12.4□□□□□ -0.42
PMF1-204ENST00000466489 KCNA3P22001 575 aa12.4□□□□□ -0.42
PMF1-204ENST00000466489 GRIPAP1Q4V328 841 aa12.4□□□□□ -0.42
PMF1-204ENST00000466489 CC2D2BQ6DHV5 1058 aa12.4□□□□□ -0.42
PMF1-204ENST00000466489 ITPRIPQ8IWB1 547 aa12.4□□□□□ -0.42
PMF1-204ENST00000466489 JARID2Q92833 1246 aaPredicted RBP12.4□□□□□ -0.42
PMF1-204ENST00000466489 BBOX1O75936 387 aa12.39□□□□□ -0.43
PMF1-204ENST00000466489 GRAPQ13588 217 aa12.39□□□□□ -0.43
PMF1-204ENST00000466489 GRAPLQ8TC17 118 aaPredicted RBP12.39□□□□□ -0.43
PMF1-204ENST00000466489 RTL9Q8NET4 1388 aa12.39□□□□□ -0.43
PMF1-204ENST00000466489 UTYO14607 1347 aa12.38□□□□□ -0.43
PMF1-204ENST00000466489 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
PMF1-204ENST00000466489 IFIT5Q13325 482 aaKnown RBP12.38□□□□□ -0.43
PMF1-204ENST00000466489 CCDC93Q567U6 631 aa12.38□□□□□ -0.43
PMF1-204ENST00000466489 TAF7LQ5H9L4 462 aa12.38□□□□□ -0.43
PMF1-204ENST00000466489 SPEF2Q9C093 1822 aa12.38□□□□□ -0.43
PMF1-204ENST00000466489 ANKRD18BA2A2Z9 1011 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 NBPF7P0C2Y1 421 aaPredicted RBP12.37□□□□□ -0.43
PMF1-204ENST00000466489 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
PMF1-204ENST00000466489 CASP7P55210 303 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 C3orf67Q6ZVT6 689 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 ANKRD18AQ8IVF6 992 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 TMEM57Q8N5G2 664 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 TTLL11Q8NHH1 800 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 DDX19BQ9UMR2 479 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 TAF1P21675 1872 aa12.37□□□□□ -0.43
PMF1-204ENST00000466489 FER1L6Q2WGJ9 1857 aa12.36□□□□□ -0.43
PMF1-204ENST00000466489 C21orf2O43822 256 aa12.36□□□□□ -0.43
PMF1-204ENST00000466489 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
PMF1-204ENST00000466489 RPS8P62241 208 aaKnown RBP12.36□□□□□ -0.43
PMF1-204ENST00000466489 CCDC85AQ96PX6 553 aaPredicted RBP12.36□□□□□ -0.43
PMF1-204ENST00000466489 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
PMF1-204ENST00000466489 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
PMF1-204ENST00000466489 GNAI2P04899 355 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 CSF1RP07333 972 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 ITGA6P23229 1130 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 LMBR1LQ6UX01 489 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 SP8Q8IXZ3 490 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 SUCLG2Q96I99 432 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 GREM2Q9H772 168 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 ATP6V0A2Q9Y487 856 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 CCDC88AQ3V6T2 1871 aa12.35□□□□□ -0.43
PMF1-204ENST00000466489 LRRC37AA6NMS7 1700 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 PLIN1O60240 522 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 FOXO4P98177 505 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 NBR1Q14596 966 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 MVPQ14764 893 aaKnown RBP12.34□□□□□ -0.43
PMF1-204ENST00000466489 SUPT20HQ8NEM7 779 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 PANK1Q8TE04 598 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 MEIS3Q99687 375 aa12.34□□□□□ -0.43
PMF1-204ENST00000466489 BICC1Q9H694 974 aaKnown RBP12.34□□□□□ -0.43
PMF1-204ENST00000466489 PTMSP20962 102 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms