RNA–Protein interactions for RNA: ENST00000466351.1

CDHR3-204, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 362 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-204ENST00000466351 UPF3BQ9BZI7 483 aaKnown RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 IL25Q9H293 177 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 RRAGDQ9NQL2 400 aaPredicted RBP8.19□□□□□ -1.1
CDHR3-204ENST00000466351 NLRP2Q9NX02 1062 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 TMEM63CQ9P1W3 806 aa8.19□□□□□ -1.1
CDHR3-204ENST00000466351 RREB1Q92766 1687 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CYP27B1O15528 508 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CASP7P55210 303 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 TRIM28Q13263 835 aaKnown RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CREB3L3Q68CJ9 461 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 ATL3Q6DD88 541 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 POTEHQ6S545 545 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CHRDL2Q6WN34 429 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CCDC191Q8NCU4 936 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 HAUS7Q99871 368 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 LLPHQ9BRT6 129 aaKnown RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 TEX13AQ9BXU3 409 aaPredicted RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 TSPY26PQ9H489 355 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 PDRG1Q9NUG6 133 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 CCDC39Q9UFE4 941 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 NOL7Q9UMY1 257 aaKnown RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 KIF3AQ9Y496 699 aa8.18□□□□□ -1.1
CDHR3-204ENST00000466351 RBM8AQ9Y5S9 174 aaKnown RBP8.18□□□□□ -1.1
CDHR3-204ENST00000466351 DOCK2Q92608 1830 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 H7C1W4 665 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 CAVIN2O95810 425 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 SYT1P21579 422 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 MSNP26038 577 aaKnown RBP8.17□□□□□ -1.1
CDHR3-204ENST00000466351 PRIM1P49642 420 aaKnown RBP8.17□□□□□ -1.1
CDHR3-204ENST00000466351 CABP4P57796 275 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 PTPN12Q05209 780 aaKnown RBP8.17□□□□□ -1.1
CDHR3-204ENST00000466351 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 BLOC1S2Q6QNY1 142 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 COPS6Q7L5N1 327 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 RASEFQ8IZ41 740 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 JAKMIP1Q96N16 626 aaKnown RBP8.17□□□□□ -1.1
CDHR3-204ENST00000466351 FSD1Q9BTV5 496 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 DSCC1Q9BVC3 393 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 CARD10Q9BWT7 1032 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 SCAND2PQ9GZW5 306 aaPredicted RBP8.17□□□□□ -1.1
CDHR3-204ENST00000466351 HELLSQ9NRZ9 838 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 SSUH2Q9Y2M2 353 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 FPGT-TNNI3KV9GXZ4 949 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 CHD4Q14839 1912 aa8.17□□□□□ -1.1
CDHR3-204ENST00000466351 SLC27A2O14975 620 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 ATRNO75882 1429 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 ANXA1P04083 346 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 TPM3P06753 285 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 TPM2P07951 284 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 ZFYP08048 801 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-204ENST00000466351 RPS6KB1P23443 525 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 IL15P40933 162 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-204ENST00000466351 NUP98P52948 1817 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 NMIQ13287 307 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-204ENST00000466351 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 KBTBD3Q8NAB2 608 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 NFATC2IPQ8NCF5 419 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 MYD88Q99836 296 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 PLA2G12BQ9BX93 195 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 AGXT2Q9BYV1 514 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 CWC25Q9NXE8 425 aaPredicted RBP8.16□□□□□ -1.1
CDHR3-204ENST00000466351 AKAP11Q9UKA4 1901 aa8.16□□□□□ -1.1
CDHR3-204ENST00000466351 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 AHDC1Q5TGY3 1603 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 WDR19Q8NEZ3 1342 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 CDHR2Q9BYE9 1310 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 TAF5LO75529 589 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 KCNJ4P48050 445 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 ZC3H6P61129 1189 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 KRT85P78386 507 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 XPCQ01831 940 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 PTH1RQ03431 593 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 MCMDC2Q4G0Z9 681 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 PRPF40BQ6NWY9 871 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 RBSNQ9H1K0 784 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 ZSCAN16Q9H4T2 348 aaPredicted RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 RTN4Q9NQC3 1192 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 DBNLQ9UJU6 430 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 PA2G4Q9UQ80 394 aaKnown RBP8.15□□□□□ -1.1
CDHR3-204ENST00000466351 MTMR6Q9Y217 621 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 ZKSCAN5Q9Y2L8 839 aa8.15□□□□□ -1.1
CDHR3-204ENST00000466351 DISP2A7MBM2 1401 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 A0A087WZG4 1122 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 A0A0D9SFI3 127 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 SYCE3A1L190 88 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 PRAMEF22A3QJZ6 481 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 OFD1O75665 1012 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 IL2RBP14784 551 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 GJB2P29033 226 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 BRINP3Q76B58 766 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 USP48Q86UV5 1035 aa8.14□□□□□ -1.11
CDHR3-204ENST00000466351 DDX19AQ9NUU7 478 aaKnown RBP8.14□□□□□ -1.11
CDHR3-204ENST00000466351 USP25Q9UHP3 1055 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms