RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 EVA1CP58658 441 aa8.91□□□□□ -0.98
NCL-208ENST00000466274 CROCC2H7BZ55 1655 aa8.91□□□□□ -0.98
NCL-208ENST00000466274 IQGAP3Q86VI3 1631 aa8.91□□□□□ -0.98
NCL-208ENST00000466274 UTRNP46939 3433 aa8.9□□□□□ -0.98
NCL-208ENST00000466274 PRICKLE2Q7Z3G6 844 aa8.9□□□□□ -0.98
NCL-208ENST00000466274 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
NCL-208ENST00000466274 MAP3K5Q99683 1374 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 CAMTA1Q9Y6Y1 1673 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 GRIN3BO60391 1043 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 RHOQP17081 205 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 PRELPP51888 382 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 BRPF1P55201 1214 aaPredicted RBP8.89□□□□□ -0.99
NCL-208ENST00000466274 FAM50AQ14320 339 aaKnown RBP8.89□□□□□ -0.99
NCL-208ENST00000466274 LYSMD3Q7Z3D4 306 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 WHAMMQ8TF30 809 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 STRN4Q9NRL3 753 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 CUEDC1Q9NWM3 386 aaPredicted RBP8.89□□□□□ -0.99
NCL-208ENST00000466274 STK26Q9P289 416 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
NCL-208ENST00000466274 VPS8Q8N3P4 1428 aa8.88□□□□□ -0.99
NCL-208ENST00000466274 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
NCL-208ENST00000466274 NRKQ7Z2Y5 1582 aa8.88□□□□□ -0.99
NCL-208ENST00000466274 TCP11L2Q8N4U5 519 aa8.88□□□□□ -0.99
NCL-208ENST00000466274 ADAMTS8Q9UP79 889 aa8.88□□□□□ -0.99
NCL-208ENST00000466274 THRAP3Q9Y2W1 955 aaKnown RBP8.88□□□□□ -0.99
NCL-208ENST00000466274 DLC1Q96QB1 1528 aa8.88□□□□□ -0.99
NCL-208ENST00000466274 GPRASP1Q5JY77 1395 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 ATP5J2-PTCD1G3V325 749 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 MEN1O00255 615 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 GSK3AP49840 483 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 RNF144AP50876 292 aaPredicted RBP8.87□□□□□ -0.99
NCL-208ENST00000466274 KCNMA1Q12791 1236 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 ZNF385CQ66K41 422 aaPredicted RBP8.87□□□□□ -0.99
NCL-208ENST00000466274 PDGFDQ9GZP0 370 aaPredicted RBP8.87□□□□□ -0.99
NCL-208ENST00000466274 PLCH1Q4KWH8 1693 aa8.87□□□□□ -0.99
NCL-208ENST00000466274 THSD7AQ9UPZ6 1657 aa8.86□□□□□ -0.99
NCL-208ENST00000466274 A0A1W2PRU2 124 aa8.86□□□□□ -0.99
NCL-208ENST00000466274 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
NCL-208ENST00000466274 TNS4Q8IZW8 715 aa8.86□□□□□ -0.99
NCL-208ENST00000466274 KIF1AQ12756 1690 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 SLURP2P0DP57 97 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 NR1H3Q13133 447 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 SVOPQ8N4V2 548 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 SIRT1Q96EB6 747 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 ABCC11Q96J66 1382 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 E9PCH4 1651 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 RREB1Q92766 1687 aa8.85□□□□□ -0.99
NCL-208ENST00000466274 NRXN1Q9ULB1 1477 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 GPR37L1O60883 481 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 POLD1P28340 1107 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 SCTRP47872 440 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 NUP188Q5SRE5 1749 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 CC2D2BQ6DHV5 1058 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 MTMR14Q8NCE2 650 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 PMFBP1Q8TBY8 1022 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 SNRKQ9NRH2 765 aa8.84□□□□□ -0.99
NCL-208ENST00000466274 COL14A1Q05707 1796 aaKnown RBP8.84□□□□□ -1
NCL-208ENST00000466274 OVOS2A0A0G2JMS6 1433 aa8.83□□□□□ -1
NCL-208ENST00000466274 OVOS2A0A0J9YW53 1432 aa8.83□□□□□ -1
NCL-208ENST00000466274 TECPR2O15040 1411 aa8.83□□□□□ -1
NCL-208ENST00000466274 OVOS2Q6IE36 1432 aa8.83□□□□□ -1
NCL-208ENST00000466274 CHRNA2Q15822 529 aa8.83□□□□□ -1
NCL-208ENST00000466274 RNF20Q5VTR2 975 aa8.83□□□□□ -1
NCL-208ENST00000466274 KCTD17Q8N5Z5 321 aa8.83□□□□□ -1
NCL-208ENST00000466274 BANK1Q8NDB2 785 aa8.83□□□□□ -1
NCL-208ENST00000466274 ROCK1Q13464 1354 aa8.83□□□□□ -1
NCL-208ENST00000466274 DHX57Q6P158 1386 aaKnown RBP8.83□□□□□ -1
NCL-208ENST00000466274 POU4F2Q12837 409 aa8.82□□□□□ -1
NCL-208ENST00000466274 GAS6Q14393 721 aa8.82□□□□□ -1
NCL-208ENST00000466274 TXNRD1Q16881 649 aa8.82□□□□□ -1
NCL-208ENST00000466274 COL13A1Q5TAT6 717 aaPredicted RBP8.82□□□□□ -1
NCL-208ENST00000466274 PCDHB11Q9Y5F2 797 aa8.82□□□□□ -1
NCL-208ENST00000466274 KIAA0232Q92628 1395 aa8.82□□□□□ -1
NCL-208ENST00000466274 ATP10DQ9P241 1426 aa8.81□□□□□ -1
NCL-208ENST00000466274 NRAPQ86VF7 1730 aa8.81□□□□□ -1
NCL-208ENST00000466274 ARHGEF15O94989 841 aa8.81□□□□□ -1
NCL-208ENST00000466274 RASSF7Q02833 373 aa8.81□□□□□ -1
NCL-208ENST00000466274 LARP1Q6PKG0 1096 aaKnown RBP8.81□□□□□ -1
NCL-208ENST00000466274 RIPOR1Q6ZS17 1223 aa8.81□□□□□ -1
NCL-208ENST00000466274 NLRP3Q96P20 1036 aa8.81□□□□□ -1
NCL-208ENST00000466274 PLEKHH1Q9ULM0 1364 aa8.81□□□□□ -1
NCL-208ENST00000466274 MYOM1P52179 1685 aa8.81□□□□□ -1
NCL-208ENST00000466274 GPC1P35052 558 aa8.8□□□□□ -1
NCL-208ENST00000466274 MCCD1P59942 119 aaPredicted RBP8.8□□□□□ -1
NCL-208ENST00000466274 ZC3H6P61129 1189 aaKnown RBP8.8□□□□□ -1
NCL-208ENST00000466274 DDB1Q16531 1140 aa8.8□□□□□ -1
NCL-208ENST00000466274 DBN1Q16643 649 aa8.8□□□□□ -1
NCL-208ENST00000466274 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
NCL-208ENST00000466274 LYPD4Q6UWN0 246 aa8.8□□□□□ -1
NCL-208ENST00000466274 TMEM151AQ8N4L1 468 aa8.8□□□□□ -1
NCL-208ENST00000466274 NGDNQ8NEJ9 315 aaKnown RBP8.8□□□□□ -1
NCL-208ENST00000466274 NDUFB9Q9Y6M9 179 aa8.8□□□□□ -1
NCL-208ENST00000466274 AATKQ6ZMQ8 1374 aa8.8□□□□□ -1
NCL-208ENST00000466274 SSH2Q76I76 1423 aa8.8□□□□□ -1
NCL-208ENST00000466274 ACIN1Q9UKV3 1341 aaKnown RBP8.8□□□□□ -1
NCL-208ENST00000466274 GPR25O00155 361 aa8.79□□□□□ -1
NCL-208ENST00000466274 GDF11O95390 407 aa8.79□□□□□ -1
NCL-208ENST00000466274 TRIM22Q8IYM9 498 aa8.79□□□□□ -1
NCL-208ENST00000466274 DNAJC5GQ8N7S2 189 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms