RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CAMK4Q16566 473 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 USP54Q70EL1 1684 aa19.49■□□□□ 0.71
SLX4-202ENST00000466154 TCHHQ07283 1943 aa19.48■□□□□ 0.71
SLX4-202ENST00000466154 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
SLX4-202ENST00000466154 EVA1CP58658 441 aa19.48■□□□□ 0.71
SLX4-202ENST00000466154 NBPF14Q5TI25 921 aa19.48■□□□□ 0.71
SLX4-202ENST00000466154 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
SLX4-202ENST00000466154 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
SLX4-202ENST00000466154 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
SLX4-202ENST00000466154 ZNF830Q96NB3 372 aaPredicted RBP19.47■□□□□ 0.71
SLX4-202ENST00000466154 CEBPZQ03701 1054 aaKnown RBP19.47■□□□□ 0.71
SLX4-202ENST00000466154 CCDC183Q5T5S1 534 aa19.47■□□□□ 0.71
SLX4-202ENST00000466154 SNRKQ9NRH2 765 aa19.47■□□□□ 0.71
SLX4-202ENST00000466154 UBE2HP62256 183 aa19.47■□□□□ 0.71
SLX4-202ENST00000466154 COPRSQ9NQ92 184 aa19.47■□□□□ 0.71
SLX4-202ENST00000466154 GOLGA6L4A6NEF3 574 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 TAF5LO75529 589 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 PLBD2Q8NHP8 589 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 JAK2O60674 1132 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 RPS6KB1P23443 525 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 LRRC24Q50LG9 513 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 IL17RAQ96F46 866 aa19.46■□□□□ 0.71
SLX4-202ENST00000466154 RFX5P48382 616 aaPredicted RBP19.46■□□□□ 0.7
SLX4-202ENST00000466154 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.7
SLX4-202ENST00000466154 CHST3Q7LGC8 479 aa19.46■□□□□ 0.7
SLX4-202ENST00000466154 TM6SF1Q9BZW5 370 aa19.46■□□□□ 0.7
SLX4-202ENST00000466154 GORABQ5T7V8 394 aa19.45■□□□□ 0.7
SLX4-202ENST00000466154 R3HCC1Q9Y3T6 440 aaKnown RBP19.45■□□□□ 0.7
SLX4-202ENST00000466154 LRP10Q7Z4F1 713 aa19.45■□□□□ 0.7
SLX4-202ENST00000466154 VSIG10Q8N0Z9 540 aa19.45■□□□□ 0.7
SLX4-202ENST00000466154 CWC25Q9NXE8 425 aaPredicted RBP19.45■□□□□ 0.7
SLX4-202ENST00000466154 ATP5JP18859 108 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 HSP90AB3PQ58FF7 597 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 OVOS2A0A0G2JMS6 1433 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 MST1RQ04912 1400 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 Q6ZUG5 572 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 NEK1Q96PY6 1258 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.44■□□□□ 0.7
SLX4-202ENST00000466154 TOB2Q14106 344 aaPredicted RBP19.44■□□□□ 0.7
SLX4-202ENST00000466154 BRF1Q92994 677 aa19.44■□□□□ 0.7
SLX4-202ENST00000466154 PUS3Q9BZE2 481 aaKnown RBP19.44■□□□□ 0.7
SLX4-202ENST00000466154 KAT6BQ8WYB5 2073 aa19.43■□□□□ 0.7
SLX4-202ENST00000466154 TAF7LQ5H9L4 462 aa19.43■□□□□ 0.7
SLX4-202ENST00000466154 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
SLX4-202ENST00000466154 SPATA31A3Q5VYP0 1347 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 H3BQV1 296 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 IFFO2Q5TF58 517 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 A0A0G2JLW4 131 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
SLX4-202ENST00000466154 MCMDC2Q4G0Z9 681 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 CYP21A2P08686 494 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 KRT85P78386 507 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 CKAP2LQ8IYA6 745 aa19.42■□□□□ 0.7
SLX4-202ENST00000466154 SYTL4Q96C24 671 aaPredicted RBP19.42■□□□□ 0.7
SLX4-202ENST00000466154 ANKRD1Q15327 319 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 DNTTIP2Q5QJE6 756 aaKnown RBP19.41■□□□□ 0.7
SLX4-202ENST00000466154 FAM184AQ8NB25 1140 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 PDLIM2Q96JY6 352 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 CSPP1Q1MSJ5 1256 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 CCDC39Q9UFE4 941 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 COL15A1P39059 1388 aa19.41■□□□□ 0.7
SLX4-202ENST00000466154 IFIT1P09914 478 aaKnown RBP19.4■□□□□ 0.7
SLX4-202ENST00000466154 GPTP24298 496 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 BRINP3Q76B58 766 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 TTC6Q86TZ1 520 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 FAM89AQ96GI7 184 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 PAG1Q9NWQ8 432 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 FOXO4P98177 505 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 GUCY1B3Q02153 619 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 WASHC4Q2M389 1173 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 NOL7Q9UMY1 257 aaKnown RBP19.4■□□□□ 0.7
SLX4-202ENST00000466154 C5P01031 1676 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 TNS3Q68CZ2 1445 aa19.4■□□□□ 0.7
SLX4-202ENST00000466154 MED23Q9ULK4 1368 aa19.39■□□□□ 0.7
SLX4-202ENST00000466154 HAND2P61296 217 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 SPATA32Q96LK8 384 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 HAUS7Q99871 368 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 ZNF609O15014 1411 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 ZNF142P52746 1687 aaPredicted RBP19.39■□□□□ 0.69
SLX4-202ENST00000466154 ADCY5O95622 1261 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 BICD2Q8TD16 824 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.69
SLX4-202ENST00000466154 PDCP20941 246 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 RABL6Q3YEC7 729 aaPredicted RBP19.38■□□□□ 0.69
SLX4-202ENST00000466154 RAB11FIP4Q86YS3 637 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 SPC24Q8NBT2 197 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.38■□□□□ 0.69
SLX4-202ENST00000466154 A0A1B0GUL7 405 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 LIG1P18858 919 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 APOBRQ0VD83 1088 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 CCDC57Q2TAC2 916 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 SYNE4Q8N205 404 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 KCNB2Q92953 911 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 HMG20BQ9P0W2 317 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 ZKSCAN5Q9Y2L8 839 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 TRPM3Q9HCF6 1732 aaPredicted RBP19.38■□□□□ 0.69
SLX4-202ENST00000466154 IL2RBP14784 551 aa19.38■□□□□ 0.69
SLX4-202ENST00000466154 NCOA5Q9HCD5 579 aaKnown RBP19.38■□□□□ 0.69
SLX4-202ENST00000466154 ATG9AQ7Z3C6 839 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms