RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 PLBD2Q8NHP8 589 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 XAGE3Q8WTP9 111 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 LBHD1Q9BQE6 289 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-205ENST00000465950 CNNM2Q9H8M5 875 aa11.07□□□□□ -0.64
SCAF11-205ENST00000465950 MAGEC2Q9UBF1 373 aaPredicted RBP11.07□□□□□ -0.64
SCAF11-205ENST00000465950 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 TTC37Q6PGP7 1564 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 R3HDM1Q15032 1099 aaKnown RBP11.06□□□□□ -0.64
SCAF11-205ENST00000465950 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 RNF123Q5XPI4 1314 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 MCM10Q7L590 875 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 RTEL1Q9NZ71 1219 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 TEKT1Q969V4 418 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 MTFR1LQ9H019 292 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
SCAF11-205ENST00000465950 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.06□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC173Q0VFZ6 552 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 RSPH3Q86UC2 560 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 APOBEC3FQ8IUX4 373 aaKnown RBP11.06□□□□□ -0.64
SCAF11-205ENST00000465950 COA7Q96BR5 231 aa11.06□□□□□ -0.64
SCAF11-205ENST00000465950 PYM1Q9BRP8 204 aaKnown RBP11.06□□□□□ -0.64
SCAF11-205ENST00000465950 SERPINB2P05120 415 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 TSPY3P0CV98 308 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 TSPY8P0CW00 308 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC148Q8NFR7 591 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 KRT23Q9C075 422 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 BSDC1Q9NW68 430 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-205ENST00000465950 STK24Q9Y6E0 443 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 F8W031 263 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-205ENST00000465950 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 PPEF1O14829 653 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-205ENST00000465950 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
SCAF11-205ENST00000465950 COPB2P35606 906 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 IL6STP40189 918 aaPredicted RBP11.05□□□□□ -0.64
SCAF11-205ENST00000465950 UBE3BQ7Z3V4 1068 aa11.05□□□□□ -0.64
SCAF11-205ENST00000465950 TNS3Q68CZ2 1445 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 MCTP2Q6DN12 878 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 OLFM4Q6UX06 510 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 DACH1Q9UI36 760 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 KIAA0232Q92628 1395 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 FMNL1O95466 1100 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-205ENST00000465950 BICD2Q8TD16 824 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 GTF3C2Q8WUA4 911 aaPredicted RBP11.04□□□□□ -0.64
SCAF11-205ENST00000465950 CCDC39Q9UFE4 941 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 HACL1Q9UJ83 578 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 LEMD3Q9Y2U8 911 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 GOLGA6L19H0YKK7 550 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 CALM1P0DP23 149 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 CALM2P0DP24 149 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 CALM3P0DP25 149 aa11.04□□□□□ -0.64
SCAF11-205ENST00000465950 A0A0U1RQG5 324 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-205ENST00000465950 EN1Q05925 392 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-205ENST00000465950 FLIIQ13045 1269 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 TXNRD1Q16881 649 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 ZFYVE27Q5T4F4 411 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 EXOC4Q96A65 974 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 AP5M1Q9H0R1 490 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
SCAF11-205ENST00000465950 ADGRL2O95490 1459 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 BECN2A8MW95 431 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 CYP7A1P22680 504 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 CETN2P41208 172 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 CETN1Q12798 172 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 FAM13BQ9NYF5 915 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 SENP3-EIF4A1A0A087X0R7 540 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 PRC1O43663 620 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 RPS6KA4O75676 772 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 MYO6Q9UM54 1294 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 KCNQ2O43526 872 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 HSP90AB2PQ58FF8 381 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 DNTTIP2Q5QJE6 756 aaKnown RBP11.03□□□□□ -0.64
SCAF11-205ENST00000465950 ZNF790Q6PG37 636 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 TMED8Q6PL24 325 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-205ENST00000465950 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
SCAF11-205ENST00000465950 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.64
SCAF11-205ENST00000465950 SMARCC2Q8TAQ2 1214 aa11.02□□□□□ -0.64
SCAF11-205ENST00000465950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.02□□□□□ -0.65
SCAF11-205ENST00000465950 ZNF213O14771 459 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 ESR2Q92731 530 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 COG6Q9Y2V7 657 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 CYP46A1Q9Y6A2 500 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 MROH5Q6ZUA9 1318 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 MAP3K19Q56UN5 1328 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 C6orf50Q9HD87 102 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 PARD3Q8TEW0 1356 aa11.02□□□□□ -0.65
SCAF11-205ENST00000465950 ZBTB7AO95365 584 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 TEX11Q8IYF3 940 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 ZSCAN31Q96LW9 406 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-205ENST00000465950 PICALMQ13492 652 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 EIF4A2Q14240 407 aaKnown RBP11.01□□□□□ -0.65
SCAF11-205ENST00000465950 CLEC4GQ6UXB4 293 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 FAM200AQ8TCP9 573 aa11.01□□□□□ -0.65
SCAF11-205ENST00000465950 FGFR1OPO95684 399 aaKnown RBP11.01□□□□□ -0.65
SCAF11-205ENST00000465950 DHX8Q14562 1220 aaKnown RBP11.01□□□□□ -0.65
SCAF11-205ENST00000465950 FAM161AQ3B820 660 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 330.5 ms