RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CDHR2Q9BYE9 1310 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 COL4A1P02462 1669 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 PSME4Q14997 1843 aa15.56■□□□□ 0.08
CNOT4-208ENST00000465721 SLC34A2O95436 690 aa15.55■□□□□ 0.08
CNOT4-208ENST00000465721 GMPSP49915 693 aaPredicted RBP15.55■□□□□ 0.08
CNOT4-208ENST00000465721 PROSER3Q2NL68 480 aa15.55■□□□□ 0.08
CNOT4-208ENST00000465721 SAPCD2Q86UD0 394 aa15.55■□□□□ 0.08
CNOT4-208ENST00000465721 UTP14AQ9BVJ6 771 aaKnown RBP15.55■□□□□ 0.08
CNOT4-208ENST00000465721 GLIS2Q9BZE0 524 aaPredicted RBP15.55■□□□□ 0.08
CNOT4-208ENST00000465721 TSKSQ9UJT2 592 aa15.55■□□□□ 0.08
CNOT4-208ENST00000465721 CELF2O95319 508 aaKnown RBP15.54■□□□□ 0.08
CNOT4-208ENST00000465721 MAP2K2P36507 400 aa15.54■□□□□ 0.08
CNOT4-208ENST00000465721 SUPT20HQ8NEM7 779 aa15.54■□□□□ 0.08
CNOT4-208ENST00000465721 BEGAINQ9BUH8 593 aa15.54■□□□□ 0.08
CNOT4-208ENST00000465721 PGAP2Q9UHJ9 254 aa15.54■□□□□ 0.08
CNOT4-208ENST00000465721 ANXA1P04083 346 aa15.53■□□□□ 0.08
CNOT4-208ENST00000465721 KIAA2012Q0VF49 1180 aa15.53■□□□□ 0.08
CNOT4-208ENST00000465721 TRPM4Q8TD43 1214 aa15.53■□□□□ 0.08
CNOT4-208ENST00000465721 HHIPL1Q96JK4 782 aa15.53■□□□□ 0.08
CNOT4-208ENST00000465721 TSPYL4Q9UJ04 414 aa15.53■□□□□ 0.08
CNOT4-208ENST00000465721 HIRAP54198 1017 aaPredicted RBP15.52■□□□□ 0.08
CNOT4-208ENST00000465721 CIAPIN1Q6FI81 312 aa15.52■□□□□ 0.08
CNOT4-208ENST00000465721 DPP8Q6V1X1 898 aaPredicted RBP15.52■□□□□ 0.08
CNOT4-208ENST00000465721 NLRP10Q86W26 655 aa15.52■□□□□ 0.08
CNOT4-208ENST00000465721 SP8Q8IXZ3 490 aa15.52■□□□□ 0.08
CNOT4-208ENST00000465721 TMX4Q9H1E5 349 aaPredicted RBP15.52■□□□□ 0.08
CNOT4-208ENST00000465721 MAPK8IP3Q9UPT6 1336 aa15.51■□□□□ 0.07
CNOT4-208ENST00000465721 SHTN1A0MZ66 631 aa15.51■□□□□ 0.07
CNOT4-208ENST00000465721 RAD17O75943 681 aa15.51■□□□□ 0.07
CNOT4-208ENST00000465721 RGS19P49795 217 aa15.51■□□□□ 0.07
CNOT4-208ENST00000465721 BRPF1P55201 1214 aaPredicted RBP15.51■□□□□ 0.07
CNOT4-208ENST00000465721 MPNDQ8N594 471 aa15.51■□□□□ 0.07
CNOT4-208ENST00000465721 CCDC85CA6NKD9 419 aa15.5■□□□□ 0.07
CNOT4-208ENST00000465721 YDJCA8MPS7 323 aa15.5■□□□□ 0.07
CNOT4-208ENST00000465721 CA12O43570 354 aa15.5■□□□□ 0.07
CNOT4-208ENST00000465721 BBOX1O75936 387 aa15.5■□□□□ 0.07
CNOT4-208ENST00000465721 HCLS1P14317 486 aaPredicted RBP15.5■□□□□ 0.07
CNOT4-208ENST00000465721 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
CNOT4-208ENST00000465721 GRAPQ13588 217 aa15.5■□□□□ 0.07
CNOT4-208ENST00000465721 GRAPLQ8TC17 118 aaPredicted RBP15.5■□□□□ 0.07
CNOT4-208ENST00000465721 ZC3H15Q8WU90 426 aaKnown RBP15.5■□□□□ 0.07
CNOT4-208ENST00000465721 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
CNOT4-208ENST00000465721 MLLT1Q03111 559 aaPredicted RBP15.48■□□□□ 0.07
CNOT4-208ENST00000465721 TNIP1Q15025 636 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 DDX46Q7L014 1031 aaKnown RBP15.48■□□□□ 0.07
CNOT4-208ENST00000465721 COPS6Q7L5N1 327 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 XAGE3Q8WTP9 111 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 BCL2L13Q9BXK5 485 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 MCOLN1Q9GZU1 580 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 ZNF408Q9H9D4 720 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 BABAM1Q9NWV8 329 aa15.48■□□□□ 0.07
CNOT4-208ENST00000465721 ZNF646O15015 1829 aaPredicted RBP15.47■□□□□ 0.07
CNOT4-208ENST00000465721 SH3TC1Q8TE82 1336 aa15.47■□□□□ 0.07
CNOT4-208ENST00000465721 CDC37L1Q7L3B6 337 aa15.47■□□□□ 0.07
CNOT4-208ENST00000465721 MICALL2Q8IY33 904 aa15.47■□□□□ 0.07
CNOT4-208ENST00000465721 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
CNOT4-208ENST00000465721 TRMT112Q9UI30 125 aaKnown RBP15.47■□□□□ 0.07
CNOT4-208ENST00000465721 CNOT7Q9UIV1 285 aaKnown RBP15.47■□□□□ 0.07
CNOT4-208ENST00000465721 SPEF2Q9C093 1822 aa15.46■□□□□ 0.07
CNOT4-208ENST00000465721 SLC4A2P04920 1241 aa15.46■□□□□ 0.07
CNOT4-208ENST00000465721 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
CNOT4-208ENST00000465721 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
CNOT4-208ENST00000465721 TMC4Q7Z404 712 aa15.46■□□□□ 0.07
CNOT4-208ENST00000465721 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
CNOT4-208ENST00000465721 PNNQ9H307 717 aaKnown RBP15.46■□□□□ 0.07
CNOT4-208ENST00000465721 MYH3P11055 1940 aa15.45■□□□□ 0.06
CNOT4-208ENST00000465721 RIPK4P57078 832 aa15.45■□□□□ 0.06
CNOT4-208ENST00000465721 NOGQ13253 232 aa15.45■□□□□ 0.06
CNOT4-208ENST00000465721 DLK2Q6UY11 383 aa15.45■□□□□ 0.06
CNOT4-208ENST00000465721 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
CNOT4-208ENST00000465721 PSMD14O00487 310 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 ZBTB22O15209 634 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 EGFRP00533 1210 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 TMPOP42166 694 aaKnown RBP15.44■□□□□ 0.06
CNOT4-208ENST00000465721 HUNKP57058 714 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 KRT24Q2M2I5 525 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 DPF2Q92785 391 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 RTL9Q8NET4 1388 aa15.44■□□□□ 0.06
CNOT4-208ENST00000465721 FAM155AB1AL88 458 aaPredicted RBP15.43■□□□□ 0.06
CNOT4-208ENST00000465721 H7C1D1 291 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 SAMD7Q7Z3H4 446 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 USP48Q86UV5 1035 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 CELF1Q92879 486 aaKnown RBP15.43■□□□□ 0.06
CNOT4-208ENST00000465721 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 DBNDD1Q9H9R9 158 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 CHPF2Q9P2E5 772 aa15.43■□□□□ 0.06
CNOT4-208ENST00000465721 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
CNOT4-208ENST00000465721 DGKZQ13574 1117 aa15.42■□□□□ 0.06
CNOT4-208ENST00000465721 WASHC4Q2M389 1173 aa15.42■□□□□ 0.06
CNOT4-208ENST00000465721 TBC1D10BQ4KMP7 808 aaPredicted RBP15.42■□□□□ 0.06
CNOT4-208ENST00000465721 ISCA1Q9BUE6 129 aa15.42■□□□□ 0.06
CNOT4-208ENST00000465721 ZNF609O15014 1411 aa15.42■□□□□ 0.06
CNOT4-208ENST00000465721 PAPPA2Q9BXP8 1791 aa15.41■□□□□ 0.06
CNOT4-208ENST00000465721 ADM5C9JUS6 153 aa15.41■□□□□ 0.06
CNOT4-208ENST00000465721 SF3B3Q15393 1217 aaKnown RBP15.41■□□□□ 0.06
CNOT4-208ENST00000465721 KRT26Q7Z3Y9 468 aa15.41■□□□□ 0.06
CNOT4-208ENST00000465721 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
CNOT4-208ENST00000465721 CHL1O00533 1208 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 ECE2O60344 883 aa15.4■□□□□ 0.06
CNOT4-208ENST00000465721 RPS12P25398 132 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms