RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 RARAP10276 462 aa10.94□□□□□ -0.66
SMC4-205ENST00000465563 CPB1P15086 417 aa10.94□□□□□ -0.66
SMC4-205ENST00000465563 COX20Q5RI15 118 aa10.94□□□□□ -0.66
SMC4-205ENST00000465563 RTCBQ9Y3I0 505 aaKnown RBP10.94□□□□□ -0.66
SMC4-205ENST00000465563 C9orf172C9J069 976 aa10.93□□□□□ -0.66
SMC4-205ENST00000465563 ELNP15502 786 aa10.93□□□□□ -0.66
SMC4-205ENST00000465563 ARID4AP29374 1257 aaPredicted RBP10.93□□□□□ -0.66
SMC4-205ENST00000465563 TREML1Q86YW5 311 aa10.93□□□□□ -0.66
SMC4-205ENST00000465563 TRPM4Q8TD43 1214 aa10.93□□□□□ -0.66
SMC4-205ENST00000465563 SEMA6BQ9H3T3 888 aa10.93□□□□□ -0.66
SMC4-205ENST00000465563 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.92□□□□□ -0.66
SMC4-205ENST00000465563 SRPK2P78362 688 aaKnown RBP10.92□□□□□ -0.66
SMC4-205ENST00000465563 FAM69CQ0P6D2 419 aa10.92□□□□□ -0.66
SMC4-205ENST00000465563 OCLNQ16625 522 aa10.92□□□□□ -0.66
SMC4-205ENST00000465563 STK32AQ8WU08 396 aa10.92□□□□□ -0.66
SMC4-205ENST00000465563 FRRS1LQ9P0K9 344 aa10.92□□□□□ -0.66
SMC4-205ENST00000465563 USP20Q9Y2K6 914 aa10.92□□□□□ -0.66
SMC4-205ENST00000465563 ZBTB42B2RXF5 422 aa10.91□□□□□ -0.66
SMC4-205ENST00000465563 EGFRP00533 1210 aa10.91□□□□□ -0.66
SMC4-205ENST00000465563 DMRTC2Q8IXT2 367 aaPredicted RBP10.91□□□□□ -0.66
SMC4-205ENST00000465563 RGL4Q8IZJ4 473 aa10.91□□□□□ -0.66
SMC4-205ENST00000465563 CMTR1Q8N1G2 835 aaKnown RBP10.91□□□□□ -0.66
SMC4-205ENST00000465563 XYLBO75191 536 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 ATG7O95352 703 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 GPLD1P80108 840 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 MLLT1Q03111 559 aaPredicted RBP10.9□□□□□ -0.66
SMC4-205ENST00000465563 PERM1Q5SV97 790 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 ELMSAN1Q6PJG2 1045 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 LPIN3Q9BQK8 851 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 ZMYND15Q9H091 742 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 TPSG1Q9NRR2 321 aa10.9□□□□□ -0.66
SMC4-205ENST00000465563 SELPP16109 830 aa10.89□□□□□ -0.67
SMC4-205ENST00000465563 C16orf46Q6P387 395 aa10.89□□□□□ -0.67
SMC4-205ENST00000465563 COL26A1Q96A83 441 aa10.89□□□□□ -0.67
SMC4-205ENST00000465563 BRD2P25440 801 aaKnown RBP10.88□□□□□ -0.67
SMC4-205ENST00000465563 NRLP54845 237 aa10.88□□□□□ -0.67
SMC4-205ENST00000465563 NRG1Q02297 640 aaPredicted RBP10.88□□□□□ -0.67
SMC4-205ENST00000465563 RSPO4Q2I0M5 234 aaPredicted RBP10.88□□□□□ -0.67
SMC4-205ENST00000465563 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
SMC4-205ENST00000465563 ILDR2Q71H61 639 aa10.88□□□□□ -0.67
SMC4-205ENST00000465563 LENG1Q96BZ8 264 aaPredicted RBP10.88□□□□□ -0.67
SMC4-205ENST00000465563 SAP130Q9H0E3 1048 aa10.88□□□□□ -0.67
SMC4-205ENST00000465563 TLR7Q9NYK1 1049 aaKnown RBP10.88□□□□□ -0.67
SMC4-205ENST00000465563 ADGRE1Q14246 886 aa10.87□□□□□ -0.67
SMC4-205ENST00000465563 NKAPLQ5M9Q1 402 aa10.87□□□□□ -0.67
SMC4-205ENST00000465563 FMR1NBQ8N0W7 255 aaPredicted RBP10.87□□□□□ -0.67
SMC4-205ENST00000465563 TTC9Q92623 222 aa10.87□□□□□ -0.67
SMC4-205ENST00000465563 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
SMC4-205ENST00000465563 ITGB7P26010 798 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 MBTPS1Q14703 1052 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 GRIK5Q16478 980 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 ETFBKMTQ8IXQ9 262 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 DTWD1Q8N5C7 304 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 KCNMB2Q9Y691 235 aa10.86□□□□□ -0.67
SMC4-205ENST00000465563 XP32Q5T750 250 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 TMEM164Q5U3C3 297 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 SHISA2Q6UWI4 295 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 HFE2Q6ZVN8 426 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 WFDC8Q8IUA0 241 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 MKNK1Q9BUB5 465 aa10.85□□□□□ -0.67
SMC4-205ENST00000465563 SMG9Q9H0W8 520 aaKnown RBP10.85□□□□□ -0.67
SMC4-205ENST00000465563 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
SMC4-205ENST00000465563 PSAPP07602 524 aa10.84□□□□□ -0.67
SMC4-205ENST00000465563 EIF2AK2P19525 551 aaKnown RBP10.84□□□□□ -0.67
SMC4-205ENST00000465563 PLAURQ03405 335 aa10.84□□□□□ -0.67
SMC4-205ENST00000465563 TXNRD3Q86VQ6 643 aa10.84□□□□□ -0.67
SMC4-205ENST00000465563 PBXIP1Q96AQ6 731 aa10.84□□□□□ -0.67
SMC4-205ENST00000465563 CCDC97Q96F63 343 aaPredicted RBP10.84□□□□□ -0.67
SMC4-205ENST00000465563 USP21Q9UK80 565 aa10.83□□□□□ -0.68
SMC4-205ENST00000465563 LOC102724428A0A0B4J2F2 783 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 MMP20O60882 483 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 SIK1P57059 783 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 NAA30Q147X3 362 aaPredicted RBP10.82□□□□□ -0.68
SMC4-205ENST00000465563 CAPN12Q6ZSI9 719 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 FBXO11Q86XK2 927 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 Q8N3U1 123 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 CLP1Q92989 425 aaKnown RBP10.82□□□□□ -0.68
SMC4-205ENST00000465563 FAM13BQ9NYF5 915 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
SMC4-205ENST00000465563 DYRK3O43781 588 aa10.81□□□□□ -0.68
SMC4-205ENST00000465563 SOX18P35713 384 aa10.81□□□□□ -0.68
SMC4-205ENST00000465563 PIK3R5Q8WYR1 880 aa10.81□□□□□ -0.68
SMC4-205ENST00000465563 J3QW42 95 aa10.8□□□□□ -0.68
SMC4-205ENST00000465563 TNFRSF10BO14763 440 aa10.8□□□□□ -0.68
SMC4-205ENST00000465563 GHRHP01286 108 aa10.8□□□□□ -0.68
SMC4-205ENST00000465563 NLRP13Q86W25 1043 aa10.8□□□□□ -0.68
SMC4-205ENST00000465563 PLD4Q96BZ4 506 aa10.8□□□□□ -0.68
SMC4-205ENST00000465563 NSUN5Q96P11 429 aaKnown RBP10.8□□□□□ -0.68
SMC4-205ENST00000465563 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
SMC4-205ENST00000465563 TRIP4Q15650 581 aaPredicted RBP10.79□□□□□ -0.68
SMC4-205ENST00000465563 FAM26DQ5JW98 314 aa10.79□□□□□ -0.68
SMC4-205ENST00000465563 RBSNQ9H1K0 784 aa10.79□□□□□ -0.68
SMC4-205ENST00000465563 UBAP1LF5GYI3 381 aa10.78□□□□□ -0.68
SMC4-205ENST00000465563 ZMYM1Q5SVZ6 1142 aa10.78□□□□□ -0.68
SMC4-205ENST00000465563 STIM2Q9P246 746 aa10.78□□□□□ -0.68
SMC4-205ENST00000465563 H2AFB1P0C5Y9 115 aa10.77□□□□□ -0.69
SMC4-205ENST00000465563 H2AFB2P0C5Z0 115 aa10.77□□□□□ -0.69
SMC4-205ENST00000465563 ZAP70P43403 619 aa10.77□□□□□ -0.69
SMC4-205ENST00000465563 IGF2-ASQ6U949 168 aa10.76□□□□□ -0.69
SMC4-205ENST00000465563 FNDC3AQ9Y2H6 1198 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms