RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 HLFQ16534 295 aa13.03□□□□□ -0.32
USP39-212ENST00000465514 KRT26Q7Z3Y9 468 aa13.03□□□□□ -0.32
USP39-212ENST00000465514 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
USP39-212ENST00000465514 KIAA0100Q14667 2235 aaKnown RBP13.03□□□□□ -0.32
USP39-212ENST00000465514 A0A0C4DFX4 3053 aa13.02□□□□□ -0.32
USP39-212ENST00000465514 RGL2O15211 777 aa13.02□□□□□ -0.33
USP39-212ENST00000465514 RAD17O75943 681 aa13.02□□□□□ -0.33
USP39-212ENST00000465514 GAS2L2Q8NHY3 880 aa13.02□□□□□ -0.33
USP39-212ENST00000465514 ZNF296Q8WUU4 475 aaPredicted RBP13.02□□□□□ -0.33
USP39-212ENST00000465514 CNOT7Q9UIV1 285 aaKnown RBP13.02□□□□□ -0.33
USP39-212ENST00000465514 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 ADM5C9JUS6 153 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 NBPF10Q6P3W6 841 aaKnown RBP13.01□□□□□ -0.33
USP39-212ENST00000465514 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
USP39-212ENST00000465514 CRAMP1Q96RY5 1269 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 NYXQ9GZU5 481 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
USP39-212ENST00000465514 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
USP39-212ENST00000465514 H7C1D1 291 aa13□□□□□ -0.33
USP39-212ENST00000465514 TNIP1Q15025 636 aa13□□□□□ -0.33
USP39-212ENST00000465514 FBXO46Q6PJ61 603 aaPredicted RBP13□□□□□ -0.33
USP39-212ENST00000465514 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
USP39-212ENST00000465514 COL6A3P12111 3177 aa13□□□□□ -0.33
USP39-212ENST00000465514 TAF1P21675 1872 aa12.99□□□□□ -0.33
USP39-212ENST00000465514 BTBD11A6QL63 1104 aa12.99□□□□□ -0.33
USP39-212ENST00000465514 C3orf67Q6ZVT6 689 aa12.99□□□□□ -0.33
USP39-212ENST00000465514 SAMD7Q7Z3H4 446 aa12.99□□□□□ -0.33
USP39-212ENST00000465514 RASAL3Q86YV0 1011 aa12.99□□□□□ -0.33
USP39-212ENST00000465514 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
USP39-212ENST00000465514 DUOX1Q9NRD9 1551 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 DLL1O00548 723 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 TBC1D8O95759 1140 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 EGFRP00533 1210 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 SLC4A2P04920 1241 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 PRKAR2BP31323 418 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 TBC1D10BQ4KMP7 808 aaPredicted RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 SUPT20HQ8NEM7 779 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 CFAP53Q96M91 514 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 TMX4Q9H1E5 349 aaPredicted RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 ATP6V0A2Q9Y487 856 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 ANKRD36CQ5JPF3 1778 aa12.98□□□□□ -0.33
USP39-212ENST00000465514 RANBP2P49792 3224 aaKnown RBP12.98□□□□□ -0.33
USP39-212ENST00000465514 LRRC37AA6NMS7 1700 aa12.97□□□□□ -0.33
USP39-212ENST00000465514 UBN2Q6ZU65 1347 aa12.97□□□□□ -0.33
USP39-212ENST00000465514 YDJCA8MPS7 323 aa12.97□□□□□ -0.33
USP39-212ENST00000465514 SNRPA1P09661 255 aaKnown RBP12.97□□□□□ -0.33
USP39-212ENST00000465514 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
USP39-212ENST00000465514 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
USP39-212ENST00000465514 DCPSQ96C86 337 aaKnown RBP12.97□□□□□ -0.33
USP39-212ENST00000465514 ZBTB12Q9Y330 459 aaPredicted RBP12.97□□□□□ -0.33
USP39-212ENST00000465514 POTEFA5A3E0 1075 aa12.96□□□□□ -0.33
USP39-212ENST00000465514 GPTP24298 496 aa12.96□□□□□ -0.33
USP39-212ENST00000465514 NUDCQ9Y266 331 aa12.96□□□□□ -0.33
USP39-212ENST00000465514 ABCC4O15439 1325 aa12.95□□□□□ -0.34
USP39-212ENST00000465514 COLQQ9Y215 455 aaPredicted RBP12.95□□□□□ -0.34
USP39-212ENST00000465514 SCN9AQ15858 1988 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 GPR25O00155 361 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 U2AF1L5P0DN76 240 aaPredicted RBP12.94□□□□□ -0.34
USP39-212ENST00000465514 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 U2AF1Q01081 240 aaKnown RBP eCLIP12.94□□□□□ -0.34
USP39-212ENST00000465514 RBM26Q5T8P6 1007 aaKnown RBP12.94□□□□□ -0.34
USP39-212ENST00000465514 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 MPNDQ8N594 471 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 DPF2Q92785 391 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 CDCA5Q96FF9 252 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 GGA3Q9NZ52 723 aa12.94□□□□□ -0.34
USP39-212ENST00000465514 PSMD14O00487 310 aa12.93□□□□□ -0.34
USP39-212ENST00000465514 NTSR2O95665 410 aa12.93□□□□□ -0.34
USP39-212ENST00000465514 MCM10Q7L590 875 aa12.93□□□□□ -0.34
USP39-212ENST00000465514 SULF1Q8IWU6 871 aa12.93□□□□□ -0.34
USP39-212ENST00000465514 NGEFQ8N5V2 710 aa12.93□□□□□ -0.34
USP39-212ENST00000465514 RTF1Q92541 710 aaKnown RBP12.93□□□□□ -0.34
USP39-212ENST00000465514 ASTN2O75129 1339 aaPredicted RBP12.92□□□□□ -0.34
USP39-212ENST00000465514 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
USP39-212ENST00000465514 ERVV-1B6SEH8 477 aa12.92□□□□□ -0.34
USP39-212ENST00000465514 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
USP39-212ENST00000465514 FKTNO75072 461 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 KIF6Q6ZMV9 814 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 KDM3BQ7LBC6 1761 aa12.91□□□□□ -0.34
USP39-212ENST00000465514 PSME4Q14997 1843 aa12.9□□□□□ -0.34
USP39-212ENST00000465514 INTS3Q68E01 1043 aaKnown RBP12.9□□□□□ -0.34
USP39-212ENST00000465514 TTLL7Q6ZT98 887 aa12.9□□□□□ -0.34
USP39-212ENST00000465514 MOB2Q70IA6 237 aa12.9□□□□□ -0.34
USP39-212ENST00000465514 DBNDD1Q9H9R9 158 aa12.9□□□□□ -0.34
USP39-212ENST00000465514 SPINK5Q9NQ38 1064 aaPredicted RBP12.9□□□□□ -0.34
USP39-212ENST00000465514 HTATSF1O43719 755 aaKnown RBP12.89□□□□□ -0.35
USP39-212ENST00000465514 RPS12P25398 132 aaKnown RBP12.89□□□□□ -0.35
USP39-212ENST00000465514 FKBP1BP68106 108 aa12.89□□□□□ -0.35
USP39-212ENST00000465514 ZNF34Q8IZ26 560 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms