RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-206ENST00000465385 TMEM2Q9UHN6 1383 aa15.96■□□□□ 0.14
MMP11-206ENST00000465385 EPB41L2O43491 1005 aaKnown RBP15.95■□□□□ 0.14
MMP11-206ENST00000465385 CCDC144BQ3MJ40 725 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 CEP135Q66GS9 1140 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 RAB11FIP4Q86YS3 637 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 CCDC144CPQ8IYA2 1237 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 TM6SF1Q9BZW5 370 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 SASH1O94885 1247 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 DDX58O95786 925 aaKnown RBP15.95■□□□□ 0.14
MMP11-206ENST00000465385 PSME1Q06323 249 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 CLSTN2Q9H4D0 955 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 ITSN1Q15811 1721 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 CCAR1Q8IX12 1150 aaKnown RBP15.95■□□□□ 0.14
MMP11-206ENST00000465385 MAP4K1Q92918 833 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 NEK1Q96PY6 1258 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 KDRP35968 1356 aa15.95■□□□□ 0.14
MMP11-206ENST00000465385 GTF2F1P35269 517 aaKnown RBP eCLIP15.94■□□□□ 0.14
MMP11-206ENST00000465385 NCBP1Q09161 790 aaKnown RBP15.94■□□□□ 0.14
MMP11-206ENST00000465385 PGBD1Q96JS3 809 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 MYD88Q99836 296 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 USP31Q70CQ4 1352 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 SMC2O95347 1197 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 BIN1O00499 593 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 SKILP12757 684 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 PTPN14Q15678 1187 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 NCOA5Q9HCD5 579 aaKnown RBP15.94■□□□□ 0.14
MMP11-206ENST00000465385 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
MMP11-206ENST00000465385 SLFNL1Q499Z3 407 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 PLEKHO1Q53GL0 409 aaPredicted RBP15.93■□□□□ 0.14
MMP11-206ENST00000465385 ISM2Q6H9L7 571 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 C11orf57Q6ZUT1 292 aaPredicted RBP15.93■□□□□ 0.14
MMP11-206ENST00000465385 PEAK1Q9H792 1746 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 TOB2Q14106 344 aaPredicted RBP15.93■□□□□ 0.14
MMP11-206ENST00000465385 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 ADCY9O60503 1353 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
MMP11-206ENST00000465385 USP27XA6NNY8 438 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 SMTNL1A8MU46 457 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 CHMP4AQ9BY43 222 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 ATP5J2-PTCD1G3V325 749 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
MMP11-206ENST00000465385 AOPEPQ8N6M6 819 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 CGNQ9P2M7 1197 aaKnown RBP15.92■□□□□ 0.14
MMP11-206ENST00000465385 CFAP45Q9UL16 551 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 ERICH4A6NGS2 130 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 FSIP1Q8NA03 581 aa15.92■□□□□ 0.14
MMP11-206ENST00000465385 CCDC69A6NI79 296 aa15.91■□□□□ 0.14
MMP11-206ENST00000465385 KCNA6P17658 529 aa15.91■□□□□ 0.14
MMP11-206ENST00000465385 C3P01024 1663 aa15.91■□□□□ 0.14
MMP11-206ENST00000465385 NRKQ7Z2Y5 1582 aa15.91■□□□□ 0.14
MMP11-206ENST00000465385 ZNF330Q9Y3S2 320 aaPredicted RBP15.9■□□□□ 0.14
MMP11-206ENST00000465385 OTUD7BQ6GQQ9 843 aa15.9■□□□□ 0.14
MMP11-206ENST00000465385 UBE3BQ7Z3V4 1068 aa15.9■□□□□ 0.14
MMP11-206ENST00000465385 HOMER1Q86YM7 354 aa15.9■□□□□ 0.14
MMP11-206ENST00000465385 LINS1Q8NG48 757 aa15.9■□□□□ 0.14
MMP11-206ENST00000465385 ZNF215Q9UL58 517 aaPredicted RBP15.9■□□□□ 0.14
MMP11-206ENST00000465385 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
MMP11-206ENST00000465385 TFCP2Q12800 502 aa15.89■□□□□ 0.13
MMP11-206ENST00000465385 ALDH1L1O75891 902 aa15.89■□□□□ 0.13
MMP11-206ENST00000465385 POLR3DP05423 398 aaPredicted RBP15.89■□□□□ 0.13
MMP11-206ENST00000465385 STX1AQ16623 288 aa15.89■□□□□ 0.13
MMP11-206ENST00000465385 GTF3C6Q969F1 213 aa15.89■□□□□ 0.13
MMP11-206ENST00000465385 GTPBP4Q9BZE4 634 aaKnown RBP15.89■□□□□ 0.13
MMP11-206ENST00000465385 ELP1O95163 1332 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 GOLIM4O00461 696 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 ELF2Q15723 593 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 CEP57L1Q8IYX8 460 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 FAM177A1Q8N128 213 aaPredicted RBP15.88■□□□□ 0.13
MMP11-206ENST00000465385 XAGE3Q8WTP9 111 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 DBNDD2Q9BQY9 259 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 PTPDC1A2A3K4 754 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 TAF5LO75529 589 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 KRT32Q14532 448 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 TDRD7Q8NHU6 1098 aaKnown RBP15.88■□□□□ 0.13
MMP11-206ENST00000465385 IL17RAQ96F46 866 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 A0A1B0GVL5 298 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 GIGYF1O75420 1035 aaPredicted RBP15.88■□□□□ 0.13
MMP11-206ENST00000465385 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 PODXL2Q9NZ53 605 aa15.88■□□□□ 0.13
MMP11-206ENST00000465385 HAND2P61296 217 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 SCRN1Q12765 414 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 AKAP4Q5JQC9 854 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 EPHA10Q5JZY3 1008 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 LRRC8AQ8IWT6 810 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 ZBTB9Q96C00 473 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 PAXBP1Q9Y5B6 917 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 RNMTO43148 476 aaKnown RBP15.87■□□□□ 0.13
MMP11-206ENST00000465385 STK38Q15208 465 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 TMC6Q7Z403 805 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 HMG20BQ9P0W2 317 aa15.87■□□□□ 0.13
MMP11-206ENST00000465385 CYP21A2P08686 494 aa15.86■□□□□ 0.13
MMP11-206ENST00000465385 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
MMP11-206ENST00000465385 ANKRD7Q92527 254 aa15.86■□□□□ 0.13
MMP11-206ENST00000465385 RESTQ13127 1097 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms