RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 RBM26Q5T8P6 1007 aaKnown RBP20.3■□□□□ 0.84
NCSTN-210ENST00000465223 DPP8Q6V1X1 898 aaPredicted RBP20.3■□□□□ 0.84
NCSTN-210ENST00000465223 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
NCSTN-210ENST00000465223 ABCC4O15439 1325 aa20.29■□□□□ 0.84
NCSTN-210ENST00000465223 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
NCSTN-210ENST00000465223 NTSR2O95665 410 aa20.28■□□□□ 0.84
NCSTN-210ENST00000465223 FBXO46Q6PJ61 603 aaPredicted RBP20.28■□□□□ 0.84
NCSTN-210ENST00000465223 TTLL7Q6ZT98 887 aa20.28■□□□□ 0.84
NCSTN-210ENST00000465223 MPNDQ8N594 471 aa20.28■□□□□ 0.84
NCSTN-210ENST00000465223 DCPSQ96C86 337 aaKnown RBP20.28■□□□□ 0.84
NCSTN-210ENST00000465223 PHACTR3Q96KR7 559 aa20.28■□□□□ 0.84
NCSTN-210ENST00000465223 IBTKQ9P2D0 1353 aaPredicted RBP20.28■□□□□ 0.84
NCSTN-210ENST00000465223 MAP3K15Q6ZN16 1313 aa20.27■□□□□ 0.84
NCSTN-210ENST00000465223 LAMB4A4D0S4 1761 aa20.27■□□□□ 0.84
NCSTN-210ENST00000465223 ERVV-1B6SEH8 477 aa20.27■□□□□ 0.84
NCSTN-210ENST00000465223 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
NCSTN-210ENST00000465223 PSMD14O00487 310 aa20.26■□□□□ 0.83
NCSTN-210ENST00000465223 REM2Q8IYK8 340 aaPredicted RBP20.26■□□□□ 0.83
NCSTN-210ENST00000465223 NLRP3Q96P20 1036 aa20.26■□□□□ 0.83
NCSTN-210ENST00000465223 ZBTB3Q9H5J0 574 aa20.26■□□□□ 0.83
NCSTN-210ENST00000465223 TAF1P21675 1872 aa20.25■□□□□ 0.83
NCSTN-210ENST00000465223 MCM10Q7L590 875 aa20.25■□□□□ 0.83
NCSTN-210ENST00000465223 SP8Q8IXZ3 490 aa20.25■□□□□ 0.83
NCSTN-210ENST00000465223 DPF2Q92785 391 aa20.25■□□□□ 0.83
NCSTN-210ENST00000465223 LAMB2P55268 1798 aa20.25■□□□□ 0.83
NCSTN-210ENST00000465223 ASTN2O75129 1339 aaPredicted RBP20.25■□□□□ 0.83
NCSTN-210ENST00000465223 POTEFA5A3E0 1075 aa20.24■□□□□ 0.83
NCSTN-210ENST00000465223 ZNF34Q8IZ26 560 aa20.24■□□□□ 0.83
NCSTN-210ENST00000465223 CDCA5Q96FF9 252 aa20.24■□□□□ 0.83
NCSTN-210ENST00000465223 DUOX1Q9NRD9 1551 aa20.24■□□□□ 0.83
NCSTN-210ENST00000465223 GPR25O00155 361 aa20.23■□□□□ 0.83
NCSTN-210ENST00000465223 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
NCSTN-210ENST00000465223 GGA3Q9NZ52 723 aa20.23■□□□□ 0.83
NCSTN-210ENST00000465223 PAPPA2Q9BXP8 1791 aa20.22■□□□□ 0.83
NCSTN-210ENST00000465223 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
NCSTN-210ENST00000465223 DCTN1Q14203 1278 aa20.22■□□□□ 0.83
NCSTN-210ENST00000465223 SULF1Q8IWU6 871 aa20.22■□□□□ 0.83
NCSTN-210ENST00000465223 DBNDD1Q9H9R9 158 aa20.22■□□□□ 0.83
NCSTN-210ENST00000465223 RRP7AQ9Y3A4 280 aaKnown RBP20.22■□□□□ 0.83
NCSTN-210ENST00000465223 KCNQ5Q9NR82 932 aa20.21■□□□□ 0.83
NCSTN-210ENST00000465223 BBOX1O75936 387 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 MYL6BP14649 208 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 PRKAR2BP31323 418 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 KIF4BQ2VIQ3 1234 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 MOB2Q70IA6 237 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 PPP1R42Q7Z4L9 355 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
NCSTN-210ENST00000465223 ANKRD36CQ5JPF3 1778 aa20.19■□□□□ 0.82
NCSTN-210ENST00000465223 R3HDMLQ9H3Y0 253 aa20.19■□□□□ 0.82
NCSTN-210ENST00000465223 COLQQ9Y215 455 aaPredicted RBP20.19■□□□□ 0.82
NCSTN-210ENST00000465223 DLL1O00548 723 aa20.18■□□□□ 0.82
NCSTN-210ENST00000465223 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
NCSTN-210ENST00000465223 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
NCSTN-210ENST00000465223 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
NCSTN-210ENST00000465223 FKTNO75072 461 aa20.17■□□□□ 0.82
NCSTN-210ENST00000465223 GIGYF2Q6Y7W6 1299 aaKnown RBP20.17■□□□□ 0.82
NCSTN-210ENST00000465223 RTF1Q92541 710 aaKnown RBP20.17■□□□□ 0.82
NCSTN-210ENST00000465223 RSPH6AQ9H0K4 717 aa20.17■□□□□ 0.82
NCSTN-210ENST00000465223 RTL9Q8NET4 1388 aa20.17■□□□□ 0.82
NCSTN-210ENST00000465223 RBBP6Q7Z6E9 1792 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 MKI67P46013 3256 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 RPS12P25398 132 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 EIF4G2P78344 907 aaKnown RBP eCLIP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 MKRN3Q13064 507 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 WASHC4Q2M389 1173 aa20.16■□□□□ 0.82
NCSTN-210ENST00000465223 NOM1Q5C9Z4 860 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 UTP14AQ9BVJ6 771 aaKnown RBP20.16■□□□□ 0.82
NCSTN-210ENST00000465223 UBE2Q2LH0YL09 131 aa20.15■□□□□ 0.82
NCSTN-210ENST00000465223 TM4SF4P48230 202 aa20.15■□□□□ 0.82
NCSTN-210ENST00000465223 GRAPQ13588 217 aa20.15■□□□□ 0.82
NCSTN-210ENST00000465223 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
NCSTN-210ENST00000465223 GRAPLQ8TC17 118 aaPredicted RBP20.15■□□□□ 0.82
NCSTN-210ENST00000465223 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
NCSTN-210ENST00000465223 LRRC37AA6NMS7 1700 aa20.15■□□□□ 0.82
NCSTN-210ENST00000465223 SCN9AQ15858 1988 aa20.14■□□□□ 0.81
NCSTN-210ENST00000465223 HCLS1P14317 486 aaPredicted RBP20.14■□□□□ 0.81
NCSTN-210ENST00000465223 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
NCSTN-210ENST00000465223 PARP10Q53GL7 1025 aa20.14■□□□□ 0.81
NCSTN-210ENST00000465223 ECE2O60344 883 aa20.13■□□□□ 0.81
NCSTN-210ENST00000465223 EN2P19622 333 aaPredicted RBP20.13■□□□□ 0.81
NCSTN-210ENST00000465223 FKBP1BP68106 108 aa20.13■□□□□ 0.81
NCSTN-210ENST00000465223 CNGB1Q14028 1251 aaPredicted RBP20.13■□□□□ 0.81
NCSTN-210ENST00000465223 DDX46Q7L014 1031 aaKnown RBP20.13■□□□□ 0.81
NCSTN-210ENST00000465223 SCARF1Q14162 830 aa20.12■□□□□ 0.81
NCSTN-210ENST00000465223 TAF7Q15545 349 aaPredicted RBP20.12■□□□□ 0.81
NCSTN-210ENST00000465223 TRIM17Q9Y577 477 aa20.12■□□□□ 0.81
NCSTN-210ENST00000465223 DDX60Q8IY21 1712 aaKnown RBP20.12■□□□□ 0.81
NCSTN-210ENST00000465223 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
NCSTN-210ENST00000465223 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
NCSTN-210ENST00000465223 INTS3Q68E01 1043 aaKnown RBP20.11■□□□□ 0.81
NCSTN-210ENST00000465223 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
NCSTN-210ENST00000465223 C6orf229H3BNL8 230 aa20.1■□□□□ 0.81
NCSTN-210ENST00000465223 POLLQ9UGP5 575 aa20.1■□□□□ 0.81
NCSTN-210ENST00000465223 KIAA0100Q14667 2235 aaKnown RBP20.09■□□□□ 0.81
NCSTN-210ENST00000465223 OTOP1Q7RTM1 612 aa20.09■□□□□ 0.81
NCSTN-210ENST00000465223 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
NCSTN-210ENST00000465223 PER1O15534 1290 aaPredicted RBP20.08■□□□□ 0.81
NCSTN-210ENST00000465223 VIL1P09327 827 aaKnown RBP20.08■□□□□ 0.81
NCSTN-210ENST00000465223 SLC17A8Q8NDX2 589 aa20.08■□□□□ 0.81
NCSTN-210ENST00000465223 CFHR5Q9BXR6 569 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms