RNA–Protein interactions for RNA: ENST00000464728.5

CHTF18-207, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 2

Gene CHTF18, Length 4,088 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-207ENST00000464728 KRT32Q14532 448 aa17.1■□□□□ 0.33
CHTF18-207ENST00000464728 ZSCAN29Q8IWY8 852 aaPredicted RBP17.1■□□□□ 0.33
CHTF18-207ENST00000464728 HEG1Q9ULI3 1381 aa17.1■□□□□ 0.33
CHTF18-207ENST00000464728 DNTTIP2Q5QJE6 756 aaKnown RBP17.1■□□□□ 0.33
CHTF18-207ENST00000464728 RBM8AQ9Y5S9 174 aaKnown RBP17.1■□□□□ 0.33
CHTF18-207ENST00000464728 SOS2Q07890 1332 aaPredicted RBP17.1■□□□□ 0.33
CHTF18-207ENST00000464728 PDE8AO60658 829 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 ST5P78524 1137 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 ZNF213O14771 459 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 KIF13AQ9H1H9 1805 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 TRAK2O60296 914 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 GSPT1P15170 499 aaKnown RBP17.09■□□□□ 0.33
CHTF18-207ENST00000464728 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 LRRC24Q50LG9 513 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 TTC41PQ6P2S7 1318 aa17.09■□□□□ 0.33
CHTF18-207ENST00000464728 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.33
CHTF18-207ENST00000464728 DTNBO60941 627 aa17.08■□□□□ 0.32
CHTF18-207ENST00000464728 UBAC1Q9BSL1 405 aa17.08■□□□□ 0.32
CHTF18-207ENST00000464728 CPA1P15085 419 aa17.08■□□□□ 0.32
CHTF18-207ENST00000464728 CCT2P78371 535 aaKnown RBP17.08■□□□□ 0.32
CHTF18-207ENST00000464728 SMIM5Q71RC9 77 aa17.08■□□□□ 0.32
CHTF18-207ENST00000464728 CNBD1Q8NA66 436 aa17.08■□□□□ 0.32
CHTF18-207ENST00000464728 USP5P45974 858 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 CCDC129Q6ZRS4 1044 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 FAM227BQ96M60 508 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
CHTF18-207ENST00000464728 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
CHTF18-207ENST00000464728 SKOR2Q2VWA4 1001 aaPredicted RBP17.07■□□□□ 0.32
CHTF18-207ENST00000464728 PDCP20941 246 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
CHTF18-207ENST00000464728 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
CHTF18-207ENST00000464728 CREBRFQ8IUR6 639 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 NYXQ9GZU5 481 aa17.07■□□□□ 0.32
CHTF18-207ENST00000464728 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 IGKV5-2P06315 115 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 SYNE4Q8N205 404 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 MAP3K15Q6ZN16 1313 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 RANBP6O60518 1105 aaKnown RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 IKQ13123 557 aaPredicted RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 CAVIN1Q6NZI2 390 aaKnown RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 MIGA1Q8NAN2 632 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 XAGE2Q96GT9 111 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 POLR1AO95602 1720 aaPredicted RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 AFF2P51816 1311 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 CCDC69A6NI79 296 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 HSPA1LP34931 641 aa17.06■□□□□ 0.32
CHTF18-207ENST00000464728 CWC22Q9HCG8 908 aaKnown RBP17.06■□□□□ 0.32
CHTF18-207ENST00000464728 UQCRFS1P1P0C7P4 283 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 HLFQ16534 295 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 MCMDC2Q4G0Z9 681 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 NECAB1Q8N987 351 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 MST1RQ04912 1400 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 CYP7A1P22680 504 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 CERKQ8TCT0 537 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 CRB1P82279 1406 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 GUCY1B3Q02153 619 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 TTF1Q15361 905 aaPredicted RBP17.05■□□□□ 0.32
CHTF18-207ENST00000464728 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 USP26Q9BXU7 913 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 GREM2Q9H772 168 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 LIMCH1Q9UPQ0 1083 aa17.05■□□□□ 0.32
CHTF18-207ENST00000464728 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 SSFA2P28290 1259 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 EPHA10Q5JZY3 1008 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 ZBTB38Q8NAP3 1195 aaPredicted RBP17.04■□□□□ 0.32
CHTF18-207ENST00000464728 RIMBP2O15034 1052 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 CCDC144CPQ8IYA2 1237 aa17.04■□□□□ 0.32
CHTF18-207ENST00000464728 C3P01024 1663 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 NBPF26B4DH59 902 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 POLR3DP05423 398 aaPredicted RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 NBPF14Q5TI25 921 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 NBPF10Q6P3W6 841 aaKnown RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 NBPF15Q8N660 670 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 NEK1Q96PY6 1258 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 BRF1Q92994 677 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 TLR7Q9NYK1 1049 aaKnown RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 MCM4P33991 863 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 RNF214Q8ND24 703 aa17.03■□□□□ 0.32
CHTF18-207ENST00000464728 ZSCAN31Q96LW9 406 aaPredicted RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 MAP2P11137 1827 aaKnown RBP17.03■□□□□ 0.32
CHTF18-207ENST00000464728 TMX3Q96JJ7 454 aa17.02■□□□□ 0.32
CHTF18-207ENST00000464728 WDR33Q9C0J8 1336 aaKnown RBP17.02■□□□□ 0.32
CHTF18-207ENST00000464728 CTSWP56202 376 aa17.02■□□□□ 0.31
CHTF18-207ENST00000464728 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.31
CHTF18-207ENST00000464728 SRP68Q9UHB9 627 aaKnown RBP17.02■□□□□ 0.31
CHTF18-207ENST00000464728 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
CHTF18-207ENST00000464728 MAGEB6Q8N7X4 407 aa17.01■□□□□ 0.31
CHTF18-207ENST00000464728 GDPD2Q9HCC8 539 aa17.01■□□□□ 0.31
CHTF18-207ENST00000464728 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
CHTF18-207ENST00000464728 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
CHTF18-207ENST00000464728 PALLDQ8WX93 1383 aa17■□□□□ 0.31
CHTF18-207ENST00000464728 IFIT3O14879 490 aaKnown RBP17■□□□□ 0.31
CHTF18-207ENST00000464728 KRT27Q7Z3Y8 459 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms