RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ENOX2Q16206 610 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 ALG1LQ6GMV1 187 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 FBF1Q8TES7 1133 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 GTPBP3Q969Y2 492 aaKnown RBP6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 PNMA5Q96PV4 448 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 CSRNP1Q96S65 589 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 ELP3Q9H9T3 547 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 EFCC1Q9HA90 598 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 NDFIP2Q9NV92 336 aa6.16□□□□□ -1.42
HMGXB4-205ENST00000464480 SFSWAPQ12872 951 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 NEUROD1Q13562 356 aa6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 MRRFQ96E11 262 aaKnown RBP6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 ABHD17AQ96GS6 310 aa6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 CFHR5Q9BXR6 569 aa6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 ABI2Q9NYB9 513 aaPredicted RBP6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 TMEM63CQ9P1W3 806 aa6.15□□□□□ -1.42
HMGXB4-205ENST00000464480 WIPF1O43516 503 aa6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 RARAP10276 462 aa6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 FGFR3P22607 806 aa6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 XPCQ01831 940 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 TTC39BQ5VTQ0 682 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 SV2AQ7L0J3 742 aa6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 PMEPA1Q969W9 287 aa6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 FOXD3Q9UJU5 478 aaPredicted RBP6.14□□□□□ -1.43
HMGXB4-205ENST00000464480 UNCXA6NJT0 531 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 CD33P20138 364 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 VEGFBP49765 207 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 SPEM2Q0P670 501 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 FAM182BQ5T319 152 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 KRT25Q7Z3Z0 450 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 GSX2Q9BZM3 304 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 MRS2Q9HD23 443 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 STRN4Q9NRL3 753 aa6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
HMGXB4-205ENST00000464480 FAM181BA6NEQ2 426 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 PHF20L1A8MW92 1017 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 SASH3O75995 380 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 VSIG8P0DPA2 414 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 DUSP9Q99956 384 aaKnown RBP6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 ZFYVE28Q9HCC9 887 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 PARP2Q9UGN5 583 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 WWC3Q9ULE0 1092 aa6.12□□□□□ -1.43
HMGXB4-205ENST00000464480 GPR25O00155 361 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 NFKB1P19838 968 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 CES1P23141 567 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 VAMP1P23763 118 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 TARSP26639 723 aaKnown RBP6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 PSMD2Q13200 908 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 VWA5B2Q8N398 1253 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 BHMTQ93088 406 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 FRMD6Q96NE9 622 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 CHRDQ9H2X0 955 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 NLRP2Q9NX02 1062 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 PRR12Q9ULL5 1215 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 SPG7Q9UQ90 795 aa6.11□□□□□ -1.43
HMGXB4-205ENST00000464480 MMP20O60882 483 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 MAP3K6O95382 1288 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 PSAPP07602 524 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 GNA15P30679 374 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 SOX18P35713 384 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 GMPRP36959 345 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 USPL1Q5W0Q7 1092 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 RAB44Q7Z6P3 723 aaPredicted RBP6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 C1orf127Q8N9H9 656 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 OR13H1Q8NG92 308 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 CCDC74AQ96AQ1 378 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 SETDB2Q96T68 719 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 CNTN3Q9P232 1028 aa6.1□□□□□ -1.43
HMGXB4-205ENST00000464480 EREGO14944 169 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 SORBS3O60504 671 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 BMP4P12644 408 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 EDN3P14138 238 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 DAB2P98082 770 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 PLAURQ03405 335 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 GRIN2CQ14957 1233 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 TMC4Q7Z404 712 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 GALNT12Q8IXK2 581 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 NPHS2Q9NP85 383 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 TLR7Q9NYK1 1049 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 KIAA1522Q9P206 1035 aaPredicted RBP6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 ZFATQ9P243 1243 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 KANSL3Q9P2N6 904 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 STK17AQ9UEE5 414 aa6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 NSFL1CQ9UNZ2 370 aaKnown RBP6.09□□□□□ -1.43
HMGXB4-205ENST00000464480 ERBB4Q15303 1308 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 GIPC1O14908 333 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 HOXD8P13378 290 aaPredicted RBP6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 MX2P20592 715 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 CTBSQ01459 385 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 HYAL2Q12891 473 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 MRPL58Q14197 206 aaKnown RBP6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 DHX32Q7L7V1 743 aaKnown RBP6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 VTI1BQ9UEU0 232 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 HCN2Q9UL51 889 aa6.08□□□□□ -1.44
HMGXB4-205ENST00000464480 GADD45BO75293 160 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms