RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 TAF7LQ5H9L4 462 aa23.33■■□□□ 1.33
CCDC78-206ENST00000463539 ZNF594Q96JF6 807 aaPredicted RBP23.33■■□□□ 1.33
CCDC78-206ENST00000463539 SETDB2Q96T68 719 aa23.33■■□□□ 1.33
CCDC78-206ENST00000463539 GREM2Q9H772 168 aa23.33■■□□□ 1.33
CCDC78-206ENST00000463539 EYA2O00167 538 aa23.33■■□□□ 1.32
CCDC78-206ENST00000463539 CIAO1O76071 339 aa23.33■■□□□ 1.32
CCDC78-206ENST00000463539 IL15P40933 162 aaPredicted RBP23.33■■□□□ 1.32
CCDC78-206ENST00000463539 ITGA6P23229 1130 aa23.32■■□□□ 1.32
CCDC78-206ENST00000463539 TFCP2Q12800 502 aa23.32■■□□□ 1.32
CCDC78-206ENST00000463539 EAF2Q96CJ1 260 aaPredicted RBP23.32■■□□□ 1.32
CCDC78-206ENST00000463539 GPATCH3Q96I76 525 aa23.32■■□□□ 1.32
CCDC78-206ENST00000463539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.32■■□□□ 1.32
CCDC78-206ENST00000463539 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 TTC41PQ6P2S7 1318 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 ANKRD18BA2A2Z9 1011 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 SDSP20132 328 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 ATG9AQ7Z3C6 839 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 FBXO3Q9UK99 471 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 CDC45O75419 566 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 NYXQ9GZU5 481 aa23.31■■□□□ 1.32
CCDC78-206ENST00000463539 SEC24BO95487 1268 aa23.3■■□□□ 1.32
CCDC78-206ENST00000463539 TNS1Q9HBL0 1735 aaKnown RBP23.29■■□□□ 1.32
CCDC78-206ENST00000463539 GTF2E1P29083 439 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-206ENST00000463539 LRRC24Q50LG9 513 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 TNNI3KQ59H18 835 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 NBPF5PQ86XG9 351 aaPredicted RBP23.29■■□□□ 1.32
CCDC78-206ENST00000463539 PI4K2BQ8TCG2 481 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 ECHDC1Q9NTX5 307 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 FPGT-TNNI3KV9GXZ4 949 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 UBR3Q6ZT12 1888 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 ERFEQ4G0M1 354 aa23.29■■□□□ 1.32
CCDC78-206ENST00000463539 ERC2O15083 957 aa23.28■■□□□ 1.32
CCDC78-206ENST00000463539 CCDC152Q4G0S7 254 aa23.28■■□□□ 1.32
CCDC78-206ENST00000463539 TBC1D9Q6ZT07 1266 aa23.28■■□□□ 1.32
CCDC78-206ENST00000463539 PUS3Q9BZE2 481 aaKnown RBP23.28■■□□□ 1.32
CCDC78-206ENST00000463539 CCDC8Q9H0W5 538 aaPredicted RBP23.28■■□□□ 1.32
CCDC78-206ENST00000463539 UPF2Q9HAU5 1272 aaKnown RBP23.28■■□□□ 1.32
CCDC78-206ENST00000463539 TFCP2L1Q9NZI6 479 aa23.27■■□□□ 1.32
CCDC78-206ENST00000463539 GLRX3O76003 335 aaKnown RBP23.26■■□□□ 1.31
CCDC78-206ENST00000463539 TLR7Q9NYK1 1049 aaKnown RBP23.26■■□□□ 1.31
CCDC78-206ENST00000463539 CARMIL3Q8ND23 1372 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 COL24A1Q17RW2 1714 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 TRIM6-TRIM34B2RNG4 842 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 ZNF827Q17R98 1081 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 TPTE2Q6XPS3 522 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 GPR108Q9NPR9 543 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
CCDC78-206ENST00000463539 MYH3P11055 1940 aa23.25■■□□□ 1.31
CCDC78-206ENST00000463539 LDHAL6AQ6ZMR3 332 aa23.25■■□□□ 1.31
CCDC78-206ENST00000463539 AKT1S1Q96B36 256 aa23.25■■□□□ 1.31
CCDC78-206ENST00000463539 LAMB2P55268 1798 aa23.25■■□□□ 1.31
CCDC78-206ENST00000463539 DDX60Q8IY21 1712 aaKnown RBP23.25■■□□□ 1.31
CCDC78-206ENST00000463539 ABCC12Q96J65 1359 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 GYS1P13807 737 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 NFIXQ14938 502 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 CASC1Q6TDU7 716 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 CEP126Q9P2H0 1117 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 RGPD3A6NKT7 1758 aaPredicted RBP23.24■■□□□ 1.31
CCDC78-206ENST00000463539 RGPD4Q7Z3J3 1758 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 ANP32AP39687 249 aaKnown RBP23.24■■□□□ 1.31
CCDC78-206ENST00000463539 SLC10A5Q5PT55 438 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 CNNM1Q9NRU3 951 aa23.24■■□□□ 1.31
CCDC78-206ENST00000463539 DBNLQ9UJU6 430 aaKnown RBP23.24■■□□□ 1.31
CCDC78-206ENST00000463539 MFAP1P55081 439 aaKnown RBP23.23■■□□□ 1.31
CCDC78-206ENST00000463539 RILPL2Q969X0 211 aa23.23■■□□□ 1.31
CCDC78-206ENST00000463539 NPHP1O15259 732 aa23.22■■□□□ 1.31
CCDC78-206ENST00000463539 ZNF609O15014 1411 aa23.22■■□□□ 1.31
CCDC78-206ENST00000463539 RIPOR2Q9Y4F9 1068 aa23.22■■□□□ 1.31
CCDC78-206ENST00000463539 LRP5O75197 1615 aa23.21■■□□□ 1.31
CCDC78-206ENST00000463539 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
CCDC78-206ENST00000463539 SF3B3Q15393 1217 aaKnown RBP23.21■■□□□ 1.31
CCDC78-206ENST00000463539 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
CCDC78-206ENST00000463539 SEC31BQ9NQW1 1179 aa23.21■■□□□ 1.31
CCDC78-206ENST00000463539 EIF5BO60841 1220 aaKnown RBP23.2■■□□□ 1.3
CCDC78-206ENST00000463539 C3orf67Q6ZVT6 689 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 CNTROBQ8N137 903 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 FLAD1Q8NFF5 587 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 NEUROD6Q96NK8 337 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 DBNDD2Q9BQY9 259 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 AKAP2Q9Y2D5 859 aa23.2■■□□□ 1.3
CCDC78-206ENST00000463539 MAP4K4O95819 1239 aaPredicted RBP23.19■■□□□ 1.3
CCDC78-206ENST00000463539 CNBD1Q8NA66 436 aa23.19■■□□□ 1.3
CCDC78-206ENST00000463539 MPHOSPH8Q99549 860 aa23.19■■□□□ 1.3
CCDC78-206ENST00000463539 A0A1B0GUL7 405 aa23.19■■□□□ 1.3
CCDC78-206ENST00000463539 IGHMBP2P38935 993 aaKnown RBP23.19■■□□□ 1.3
CCDC78-206ENST00000463539 NLRP3Q96P20 1036 aa23.19■■□□□ 1.3
CCDC78-206ENST00000463539 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
CCDC78-206ENST00000463539 CDC5LQ99459 802 aaKnown RBP23.19■■□□□ 1.3
CCDC78-206ENST00000463539 TIMM10P62072 90 aa23.18■■□□□ 1.3
CCDC78-206ENST00000463539 EN1Q05925 392 aaPredicted RBP23.18■■□□□ 1.3
CCDC78-206ENST00000463539 SF3B2Q13435 895 aaKnown RBP23.18■■□□□ 1.3
CCDC78-206ENST00000463539 TUBGCP6Q96RT7 1819 aa23.17■■□□□ 1.3
CCDC78-206ENST00000463539 MSH5O43196 834 aa23.17■■□□□ 1.3
CCDC78-206ENST00000463539 EZH2Q15910 746 aaKnown RBP23.17■■□□□ 1.3
CCDC78-206ENST00000463539 MROH5Q6ZUA9 1318 aa23.17■■□□□ 1.3
CCDC78-206ENST00000463539 ATP5JP18859 108 aa23.17■■□□□ 1.3
CCDC78-206ENST00000463539 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
CCDC78-206ENST00000463539 CCDC24Q8N4L8 307 aa23.17■■□□□ 1.3
CCDC78-206ENST00000463539 TBC1D32Q96NH3 1257 aa23.16■■□□□ 1.3
CCDC78-206ENST00000463539 BOLA2Q9H3K6 86 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms