RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 MEIOBQ8N635 442 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.68□□□□□ -1.5
GPNMB-205ENST00000463011 PIF1Q9H611 641 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 ZSWIM4Q9H7M6 989 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 CNTN3Q9P232 1028 aa5.68□□□□□ -1.5
GPNMB-205ENST00000463011 EREGO14944 169 aa5.67□□□□□ -1.5
GPNMB-205ENST00000463011 STK10O94804 968 aaKnown RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 CTSOP43234 321 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 ST13P50502 369 aaKnown RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 PRICKLE2Q7Z3G6 844 aa5.67□□□□□ -1.5
GPNMB-205ENST00000463011 GALNT12Q8IXK2 581 aa5.67□□□□□ -1.5
GPNMB-205ENST00000463011 C1orf127Q8N9H9 656 aa5.67□□□□□ -1.5
GPNMB-205ENST00000463011 ZIC5Q96T25 663 aa5.67□□□□□ -1.5
GPNMB-205ENST00000463011 TSEN34Q9BSV6 310 aaKnown RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 HIRIP3Q9BW71 556 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 TMA7Q9Y2S6 64 aaKnown RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 GPC6Q9Y625 555 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-205ENST00000463011 TLDC2A0PJX2 215 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 SPATA31C2B4DYI2 1134 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 SPINT1O43278 529 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 XYLBO75191 536 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 FGRP09769 529 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 ATF4P18848 351 aaPredicted RBP5.66□□□□□ -1.5
GPNMB-205ENST00000463011 NCLP19338 710 aaKnown RBP5.66□□□□□ -1.5
GPNMB-205ENST00000463011 ATP4AP20648 1035 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 GRNP28799 593 aaKnown RBP5.66□□□□□ -1.5
GPNMB-205ENST00000463011 GJA8P48165 433 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 GRM2Q14416 872 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 SOGA3Q5TF21 947 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 ZNF662Q6ZS27 426 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 ERMP1Q7Z2K6 904 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 CYP4X1Q8N118 509 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 GPRASP2Q96D09 838 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 SRCIN1Q9C0H9 1055 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 CHRDQ9H2X0 955 aa5.66□□□□□ -1.5
GPNMB-205ENST00000463011 LCE2BO14633 110 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 RHOQP17081 205 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 SMPD1P17405 629 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 MSX1P28360 303 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 CEP63Q96MT8 703 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 SUV39H2Q9H5I1 410 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 KBTBD4Q9NVX7 518 aa5.65□□□□□ -1.5
GPNMB-205ENST00000463011 TTF2Q9UNY4 1162 aaKnown RBP5.65□□□□□ -1.5
GPNMB-205ENST00000463011 A0A1W2PNR3 127 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 MINDY4BA8MYZ0 360 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 F6X3S4 739 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 TNFRSF10AO00220 468 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 EPB42P16452 691 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 TTC39BQ5VTQ0 682 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-205ENST00000463011 HPS1Q92902 700 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 OSBPL2Q9H1P3 480 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 TIMMDC1Q9NPL8 285 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 PPP4R2Q9NY27 417 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 ABI2Q9NYB9 513 aaPredicted RBP5.64□□□□□ -1.51
GPNMB-205ENST00000463011 GJA3Q9Y6H8 435 aa5.64□□□□□ -1.51
GPNMB-205ENST00000463011 GDF9O60383 454 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 UPP2O95045 317 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 BMP2P12643 396 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 CES1P23141 567 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 GSTT1P30711 240 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 TYRO3Q06418 890 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 BMS1Q14692 1282 aaKnown RBP5.63□□□□□ -1.51
GPNMB-205ENST00000463011 LYSMD3Q7Z3D4 306 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 NLRP13Q86W25 1043 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 RELL1Q8IUW5 271 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 PMEPA1Q969W9 287 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 SPON2Q9BUD6 331 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 EHD4Q9H223 541 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 TOR4AQ9NXH8 423 aa5.63□□□□□ -1.51
GPNMB-205ENST00000463011 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.63□□□□□ -1.51
GPNMB-205ENST00000463011 A0A0G2JS52 829 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 A0A1B0GTH6 734 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 A0A1W2PP55 124 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 CAPN5O15484 640 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-205ENST00000463011 CYP2E1P05181 493 aaPredicted RBP5.62□□□□□ -1.51
GPNMB-205ENST00000463011 WDR44Q5JSH3 913 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 C6orf118Q5T5N4 469 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 KIAA0319Q5VV43 1072 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 SDE2Q6IQ49 451 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 GLIS3Q8NEA6 775 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 RNF217Q8TC41 542 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 TRIM56Q9BRZ2 755 aaKnown RBP5.62□□□□□ -1.51
GPNMB-205ENST00000463011 RSRP1Q9BUV0 290 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 NOC4LQ9BVI4 516 aaKnown RBP5.62□□□□□ -1.51
GPNMB-205ENST00000463011 ZCCHC2Q9C0B9 1178 aaKnown RBP5.62□□□□□ -1.51
GPNMB-205ENST00000463011 LATS2Q9NRM7 1088 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 KANSL3Q9P2N6 904 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 ADAMTS1Q9UHI8 967 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 TBX22Q9Y458 520 aa5.62□□□□□ -1.51
GPNMB-205ENST00000463011 SASH3O75995 380 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 EGFRP00533 1210 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 SSBP05455 408 aaKnown RBP eCLIP5.61□□□□□ -1.51
GPNMB-205ENST00000463011 GBP2P32456 591 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-205ENST00000463011 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-205ENST00000463011 FCGRTP55899 365 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 CCDC85BQ15834 202 aaPredicted RBP5.61□□□□□ -1.51
GPNMB-205ENST00000463011 KIAA0825Q8IV33 1275 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 CKAP2LQ8IYA6 745 aa5.61□□□□□ -1.51
GPNMB-205ENST00000463011 ANKRD13AQ8IZ07 590 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms