RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 V9GYY5 206 aaPredicted RBP14.8□□□□□ -0.04
HDAC4-208ENST00000463007 IGKV5-2P06315 115 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 LMOD2Q6P5Q4 547 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 CCDC186Q7Z3E2 898 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 LINS1Q8NG48 757 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 COL15A1P39059 1388 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 CYP27B1O15528 508 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 ATF3P18847 181 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 AIMP1Q12904 312 aaKnown RBP14.79□□□□□ -0.04
HDAC4-208ENST00000463007 CCDC8Q9H0W5 538 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-208ENST00000463007 NDUFB9Q9Y6M9 179 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 CWF19L2Q2TBE0 894 aaKnown RBP14.79□□□□□ -0.04
HDAC4-208ENST00000463007 CDC37L1Q7L3B6 337 aa14.79□□□□□ -0.04
HDAC4-208ENST00000463007 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
HDAC4-208ENST00000463007 ME3Q16798 604 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 FAM227BQ96M60 508 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 KCPQ6ZWJ8 1503 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 CADPS2Q86UW7 1296 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.78□□□□□ -0.04
HDAC4-208ENST00000463007 RAD50Q92878 1312 aa14.78□□□□□ -0.04
HDAC4-208ENST00000463007 MTERF4Q7Z6M4 381 aaKnown RBP14.77□□□□□ -0.04
HDAC4-208ENST00000463007 LSG1Q9H089 658 aaKnown RBP14.77□□□□□ -0.04
HDAC4-208ENST00000463007 DACT1Q9NYF0 836 aa14.77□□□□□ -0.04
HDAC4-208ENST00000463007 C9orf78Q9NZ63 289 aaPredicted RBP14.77□□□□□ -0.04
HDAC4-208ENST00000463007 ATP6V1DQ9Y5K8 247 aa14.77□□□□□ -0.04
HDAC4-208ENST00000463007 CYP46A1Q9Y6A2 500 aa14.77□□□□□ -0.04
HDAC4-208ENST00000463007 TOGARAM1Q9Y4F4 1720 aa14.77□□□□□ -0.04
HDAC4-208ENST00000463007 IFIT2P09913 472 aaKnown RBP14.77□□□□□ -0.05
HDAC4-208ENST00000463007 CCDC192P0DO97 292 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 HSP90AB4PQ58FF6 505 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 BICD2Q8TD16 824 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 ERCC4Q92889 916 aaPredicted RBP14.77□□□□□ -0.05
HDAC4-208ENST00000463007 MTMR6Q9Y217 621 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 GRM8O00222 908 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 TTC6Q86TZ1 520 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 KLHDC4Q8TBB5 520 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 RAPGEF4Q8WZA2 1011 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 LRRC2Q9BYS8 371 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 BOLA2Q9H3K6 86 aa14.77□□□□□ -0.05
HDAC4-208ENST00000463007 NHSL1Q5SYE7 1610 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 SLC39A6Q13433 755 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 ANO6Q4KMQ2 910 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 EDC3Q96F86 508 aaKnown RBP14.76□□□□□ -0.05
HDAC4-208ENST00000463007 SUCLG2Q96I99 432 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 TNMDQ9H2S6 317 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 TAF6LQ9Y6J9 622 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 AACSQ86V21 672 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 CABLES1Q8TDN4 633 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 SYTL4Q96C24 671 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-208ENST00000463007 PRIMPOLQ96LW4 560 aa14.76□□□□□ -0.05
HDAC4-208ENST00000463007 COL5A2P05997 1499 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-208ENST00000463007 TATP17735 454 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-208ENST00000463007 IFNL2Q8IZJ0 200 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 NFATC2IPQ8NCF5 419 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-208ENST00000463007 NUP62CLQ9H1M0 184 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 UVSSAQ2YD98 709 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 CLASRPQ8N2M8 674 aaKnown RBP14.75□□□□□ -0.05
HDAC4-208ENST00000463007 DCAF5Q96JK2 942 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 TTC14Q96N46 770 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 NLRP2Q9NX02 1062 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 SMAP1Q8IYB5 467 aaPredicted RBP14.75□□□□□ -0.05
HDAC4-208ENST00000463007 DNAJC25Q9H1X3 360 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 TPCN1Q9ULQ1 816 aa14.75□□□□□ -0.05
HDAC4-208ENST00000463007 NEURL1BA8MQ27 555 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 SASH1O94885 1247 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 ZKSCAN1P17029 563 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-208ENST00000463007 ZSCAN20P17040 1043 aaPredicted RBP14.74□□□□□ -0.05
HDAC4-208ENST00000463007 FGD1P98174 961 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 BRINP3Q76B58 766 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 KIAA1524Q8TCG1 905 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 CHGBP05060 677 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 TYRO3Q06418 890 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 MAP3K11Q16584 847 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 BICC1Q9H694 974 aaKnown RBP14.74□□□□□ -0.05
HDAC4-208ENST00000463007 SNRKQ9NRH2 765 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
HDAC4-208ENST00000463007 TNS2Q63HR2 1409 aa14.74□□□□□ -0.05
HDAC4-208ENST00000463007 HSP90B1P14625 803 aaKnown RBP14.73□□□□□ -0.05
HDAC4-208ENST00000463007 ARID5BQ14865 1188 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 SPATA32Q96LK8 384 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
HDAC4-208ENST00000463007 SOS2Q07890 1332 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-208ENST00000463007 GOLGA6L6A8MZA4 724 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 KRT85P78386 507 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 KCNB2Q92953 911 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 FILIP1Q7Z7B0 1213 aa14.73□□□□□ -0.05
HDAC4-208ENST00000463007 GLRX3O76003 335 aaKnown RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 LETM1O95202 739 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 CHRNA2Q15822 529 aa14.72□□□□□ -0.05
HDAC4-208ENST00000463007 TPD52L1Q16890 204 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 LARP1Q6PKG0 1096 aaKnown RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 METTL22Q9BUU2 404 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 JCADQ9P266 1359 aa14.72□□□□□ -0.05
HDAC4-208ENST00000463007 DDX58O95786 925 aaKnown RBP14.72□□□□□ -0.05
HDAC4-208ENST00000463007 GCKRQ14397 625 aa14.72□□□□□ -0.05
HDAC4-208ENST00000463007 FSD1Q9BTV5 496 aa14.72□□□□□ -0.05
HDAC4-208ENST00000463007 JAK2O60674 1132 aa14.71□□□□□ -0.05
HDAC4-208ENST00000463007 TNNT1P13805 278 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms