RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 NIP7Q9Y221 180 aaKnown RBP eCLIP10.43□□□□□ -0.74
SMC3-202ENST00000462899 ZNF652Q9Y2D9 606 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 CENPFP49454 3210 aa10.43□□□□□ -0.74
SMC3-202ENST00000462899 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 TIE1P35590 1138 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 ATN1P54259 1190 aaPredicted RBP10.42□□□□□ -0.74
SMC3-202ENST00000462899 PDAP1Q13442 181 aaKnown RBP10.42□□□□□ -0.74
SMC3-202ENST00000462899 HLFQ16534 295 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 JDP2Q8WYK2 163 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 DUOX1Q9NRD9 1551 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 TAF1P21675 1872 aa10.42□□□□□ -0.74
SMC3-202ENST00000462899 NPC1L1Q9UHC9 1359 aa10.41□□□□□ -0.74
SMC3-202ENST00000462899 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.41□□□□□ -0.74
SMC3-202ENST00000462899 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
SMC3-202ENST00000462899 ATMINO43313 823 aaPredicted RBP10.41□□□□□ -0.74
SMC3-202ENST00000462899 LMOD1P29536 600 aaPredicted RBP10.41□□□□□ -0.74
SMC3-202ENST00000462899 EIF6P56537 245 aaKnown RBP10.41□□□□□ -0.74
SMC3-202ENST00000462899 ZFP91Q96JP5 570 aaPredicted RBP10.41□□□□□ -0.74
SMC3-202ENST00000462899 GPRC5DQ9NZD1 345 aa10.41□□□□□ -0.74
SMC3-202ENST00000462899 GJA3Q9Y6H8 435 aa10.41□□□□□ -0.74
SMC3-202ENST00000462899 UBN2Q6ZU65 1347 aa10.4□□□□□ -0.74
SMC3-202ENST00000462899 CLSPNQ9HAW4 1339 aa10.4□□□□□ -0.74
SMC3-202ENST00000462899 SNRPA1P09661 255 aaKnown RBP10.4□□□□□ -0.74
SMC3-202ENST00000462899 GRIPAP1Q4V328 841 aa10.4□□□□□ -0.74
SMC3-202ENST00000462899 PAXIP1Q6ZW49 1069 aaPredicted RBP10.4□□□□□ -0.74
SMC3-202ENST00000462899 PHACTR3Q96KR7 559 aa10.4□□□□□ -0.74
SMC3-202ENST00000462899 ADARB2Q9NS39 739 aaKnown RBP10.4□□□□□ -0.74
SMC3-202ENST00000462899 DDX60Q8IY21 1712 aaKnown RBP10.4□□□□□ -0.74
SMC3-202ENST00000462899 CDHR2Q9BYE9 1310 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 GRM1Q13255 1194 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 NPM2Q86SE8 214 aaKnown RBP10.39□□□□□ -0.75
SMC3-202ENST00000462899 LARGE2Q8N3Y3 721 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 ZIC5Q96T25 663 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 RSPH6AQ9H0K4 717 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 PSME4Q14997 1843 aa10.39□□□□□ -0.75
SMC3-202ENST00000462899 CELF2O95319 508 aaKnown RBP10.38□□□□□ -0.75
SMC3-202ENST00000462899 HIRAP54198 1017 aaPredicted RBP10.38□□□□□ -0.75
SMC3-202ENST00000462899 DGKZQ13574 1117 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 CIAPIN1Q6FI81 312 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
SMC3-202ENST00000462899 C3orf67Q6ZVT6 689 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 CRAMP1Q96RY5 1269 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 GLIS2Q9BZE0 524 aaPredicted RBP10.38□□□□□ -0.75
SMC3-202ENST00000462899 VPS33BQ9H267 617 aa10.38□□□□□ -0.75
SMC3-202ENST00000462899 SCN9AQ15858 1988 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 FAM177BA6PVY3 158 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 FAM155AB1AL88 458 aaPredicted RBP10.37□□□□□ -0.75
SMC3-202ENST00000462899 ERVV-1B6SEH8 477 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 CXCL9Q07325 125 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
SMC3-202ENST00000462899 RTFDC1Q9BY42 306 aaPredicted RBP10.37□□□□□ -0.75
SMC3-202ENST00000462899 NYXQ9GZU5 481 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 TRIM35Q9UPQ4 493 aa10.37□□□□□ -0.75
SMC3-202ENST00000462899 MAP3K15Q6ZN16 1313 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
SMC3-202ENST00000462899 NTSR2O95665 410 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 NOGQ13253 232 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 AOC3Q16853 763 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 NIM1KQ8IY84 436 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 SAGE1Q9NXZ1 904 aa10.36□□□□□ -0.75
SMC3-202ENST00000462899 SZT2Q5T011 3432 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 COL4A1P02462 1669 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 U2SURPO15042 1029 aaKnown RBP10.35□□□□□ -0.75
SMC3-202ENST00000462899 PPIP5K2O43314 1243 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 PRKAR2BP31323 418 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 GMPSP49915 693 aaPredicted RBP10.35□□□□□ -0.75
SMC3-202ENST00000462899 PRPF38BQ5VTL8 546 aaKnown RBP10.35□□□□□ -0.75
SMC3-202ENST00000462899 MCM10Q7L590 875 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 ZNF34Q8IZ26 560 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 TRPM4Q8TD43 1214 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 RPGRQ92834 1020 aaKnown RBP10.35□□□□□ -0.75
SMC3-202ENST00000462899 ZNRF3Q9ULT6 936 aa10.35□□□□□ -0.75
SMC3-202ENST00000462899 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
SMC3-202ENST00000462899 LAMB1P07942 1786 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 SHTN1A0MZ66 631 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 STK25O00506 426 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 CC2D1BQ5T0F9 858 aaKnown RBP10.34□□□□□ -0.75
SMC3-202ENST00000462899 SUSD4Q5VX71 490 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 TTLL7Q6ZT98 887 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 ATP6V0A2Q9Y487 856 aa10.34□□□□□ -0.75
SMC3-202ENST00000462899 RBBP6Q7Z6E9 1792 aaKnown RBP10.34□□□□□ -0.75
SMC3-202ENST00000462899 ABCC4O15439 1325 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 YDJCA8MPS7 323 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 GTF2E1P29083 439 aaPredicted RBP10.33□□□□□ -0.76
SMC3-202ENST00000462899 SOX10P56693 466 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 KIAA2012Q0VF49 1180 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 CDC37L1Q7L3B6 337 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 LRP10Q7Z4F1 713 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 RBM17Q96I25 401 aaKnown RBP10.33□□□□□ -0.76
SMC3-202ENST00000462899 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
SMC3-202ENST00000462899 HTATSF1O43719 755 aaKnown RBP10.32□□□□□ -0.76
SMC3-202ENST00000462899 HUNKP57058 714 aa10.32□□□□□ -0.76
SMC3-202ENST00000462899 DCTN1Q14203 1278 aa10.32□□□□□ -0.76
SMC3-202ENST00000462899 SLC10A5Q5PT55 438 aa10.32□□□□□ -0.76
SMC3-202ENST00000462899 DLK2Q6UY11 383 aa10.32□□□□□ -0.76
SMC3-202ENST00000462899 PAPPA2Q9BXP8 1791 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms