RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 MCM10Q7L590 875 aa11.96□□□□□ -0.5
SRRM1-205ENST00000462710 MPNDQ8N594 471 aa11.96□□□□□ -0.5
SRRM1-205ENST00000462710 H7C1D1 291 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 TRAF5O00463 557 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 AOC2O75106 756 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 DGKZQ13574 1117 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 NFE2L2Q16236 605 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 RGMBQ6NW40 437 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 PLEKHF1Q96S99 279 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 SLC10A3P09131 477 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 AOC3Q16853 763 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
SRRM1-205ENST00000462710 TTLL7Q6ZT98 887 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 PITPNM2Q9BZ72 1349 aa11.95□□□□□ -0.5
SRRM1-205ENST00000462710 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-205ENST00000462710 DPP8Q6V1X1 898 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-205ENST00000462710 NEFMP07197 916 aa11.94□□□□□ -0.5
SRRM1-205ENST00000462710 U2AF1L5P0DN76 240 aaPredicted RBP11.94□□□□□ -0.5
SRRM1-205ENST00000462710 U2AF1Q01081 240 aaKnown RBP eCLIP11.94□□□□□ -0.51e-12■■□□□ 14.4
SRRM1-205ENST00000462710 PDIA6Q15084 440 aa11.94□□□□□ -0.5
SRRM1-205ENST00000462710 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
SRRM1-205ENST00000462710 NUTM1Q86Y26 1132 aa11.94□□□□□ -0.5
SRRM1-205ENST00000462710 HOXB7P09629 217 aa11.93□□□□□ -0.5
SRRM1-205ENST00000462710 GLIS2Q9BZE0 524 aaPredicted RBP11.93□□□□□ -0.5
SRRM1-205ENST00000462710 PIP4K2AP48426 406 aaPredicted RBP11.93□□□□□ -0.5
SRRM1-205ENST00000462710 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
SRRM1-205ENST00000462710 C2orf69Q8N8R5 385 aa11.93□□□□□ -0.5
SRRM1-205ENST00000462710 EYA3Q99504 573 aa11.93□□□□□ -0.5
SRRM1-205ENST00000462710 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
SRRM1-205ENST00000462710 GCC1Q96CN9 775 aa11.92□□□□□ -0.5
SRRM1-205ENST00000462710 GBA2Q9HCG7 927 aaPredicted RBP11.92□□□□□ -0.5
SRRM1-205ENST00000462710 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
SRRM1-205ENST00000462710 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
SRRM1-205ENST00000462710 TRIM28Q13263 835 aaKnown RBP11.92□□□□□ -0.5
SRRM1-205ENST00000462710 C3orf67Q6ZVT6 689 aa11.92□□□□□ -0.5
SRRM1-205ENST00000462710 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
SRRM1-205ENST00000462710 NLRP10Q86W26 655 aa11.92□□□□□ -0.5
SRRM1-205ENST00000462710 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
SRRM1-205ENST00000462710 HSP90B1P14625 803 aaKnown RBP11.91□□□□□ -0.5
SRRM1-205ENST00000462710 ZNF280AP59817 542 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-205ENST00000462710 TCIRG1Q13488 830 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-205ENST00000462710 COL1A1P02452 1464 aaPredicted RBP11.91□□□□□ -0.5
SRRM1-205ENST00000462710 YDJCA8MPS7 323 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 FMR1Q06787 632 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRRM1-205ENST00000462710 LMOD3Q0VAK6 560 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 CASP8AP2Q9UKL3 1982 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 SH3TC1Q8TE82 1336 aa11.91□□□□□ -0.5
SRRM1-205ENST00000462710 VIL1P09327 827 aaKnown RBP11.9□□□□□ -0.5
SRRM1-205ENST00000462710 RNF186Q9NXI6 227 aa11.9□□□□□ -0.5
SRRM1-205ENST00000462710 GOLGB1Q14789 3259 aaKnown RBP11.9□□□□□ -0.5
SRRM1-205ENST00000462710 HUNKP57058 714 aa11.9□□□□□ -0.5
SRRM1-205ENST00000462710 AGBL3Q8NEM8 1001 aa11.9□□□□□ -0.5
SRRM1-205ENST00000462710 TAF1P21675 1872 aa11.9□□□□□ -0.5
SRRM1-205ENST00000462710 MICALL2Q8IY33 904 aa11.9□□□□□ -0.51
SRRM1-205ENST00000462710 UNCXA6NJT0 531 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 FAM177BA6PVY3 158 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 USP48Q86UV5 1035 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 DCPSQ96C86 337 aaKnown RBP11.89□□□□□ -0.51
SRRM1-205ENST00000462710 ISCA1Q9BUE6 129 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 KIF23Q02241 960 aaPredicted RBP11.89□□□□□ -0.51
SRRM1-205ENST00000462710 DCTN1Q14203 1278 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
SRRM1-205ENST00000462710 GPTP24298 496 aa11.88□□□□□ -0.51
SRRM1-205ENST00000462710 RRP7AQ9Y3A4 280 aaKnown RBP11.88□□□□□ -0.51
SRRM1-205ENST00000462710 TM4SF4P48230 202 aa11.87□□□□□ -0.51
SRRM1-205ENST00000462710 RASAL3Q86YV0 1011 aa11.87□□□□□ -0.51
SRRM1-205ENST00000462710 PLBD2Q8NHP8 589 aa11.87□□□□□ -0.51
SRRM1-205ENST00000462710 PSMD14O00487 310 aa11.87□□□□□ -0.51
SRRM1-205ENST00000462710 KRT26Q7Z3Y9 468 aa11.87□□□□□ -0.51
SRRM1-205ENST00000462710 RTL9Q8NET4 1388 aa11.86□□□□□ -0.51
SRRM1-205ENST00000462710 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
SRRM1-205ENST00000462710 CSRNP1Q96S65 589 aa11.86□□□□□ -0.51
SRRM1-205ENST00000462710 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
SRRM1-205ENST00000462710 MYL6BP14649 208 aa11.86□□□□□ -0.51
SRRM1-205ENST00000462710 GMLQ99445 158 aa11.86□□□□□ -0.51
SRRM1-205ENST00000462710 RAD17O75943 681 aa11.85□□□□□ -0.51
SRRM1-205ENST00000462710 KIF4BQ2VIQ3 1234 aa11.85□□□□□ -0.51
SRRM1-205ENST00000462710 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
SRRM1-205ENST00000462710 ZNF157P51786 506 aaPredicted RBP11.85□□□□□ -0.51
SRRM1-205ENST00000462710 CDCA5Q96FF9 252 aa11.85□□□□□ -0.51
SRRM1-205ENST00000462710 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
SRRM1-205ENST00000462710 ECE2O60344 883 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 TRMT112Q9UI30 125 aaKnown RBP11.84□□□□□ -0.51
SRRM1-205ENST00000462710 TSKSQ9UJT2 592 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 ECM29Q5VYK3 1845 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 CHL1O00533 1208 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 FBXO46Q6PJ61 603 aaPredicted RBP11.84□□□□□ -0.51
SRRM1-205ENST00000462710 SULF1Q8IWU6 871 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 HPS5Q9UPZ3 1129 aa11.84□□□□□ -0.51
SRRM1-205ENST00000462710 MYO3BQ8WXR4 1341 aa11.83□□□□□ -0.51
SRRM1-205ENST00000462710 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.51
SRRM1-205ENST00000462710 RSBN1LQ6PCB5 846 aaPredicted RBP11.83□□□□□ -0.52
SRRM1-205ENST00000462710 TBC1D16Q8TBP0 767 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 COL4A1P02462 1669 aa11.83□□□□□ -0.52
SRRM1-205ENST00000462710 GPSM2P81274 684 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms