RNA–Protein interactions for RNA: ENST00000462539.1

SREBF2-204, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-204ENST00000462539 BLOC1S2Q6QNY1 142 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 DDX54Q8TDD1 881 aaKnown RBP8.8□□□□□ -1
SREBF2-204ENST00000462539 ZNF830Q96NB3 372 aaPredicted RBP8.8□□□□□ -1
SREBF2-204ENST00000462539 FSD1Q9BTV5 496 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 CCDC8Q9H0W5 538 aaPredicted RBP8.8□□□□□ -1
SREBF2-204ENST00000462539 NUP62CLQ9H1M0 184 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 KCNF1Q9H3M0 494 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 TTC12Q9H892 705 aaPredicted RBP8.8□□□□□ -1
SREBF2-204ENST00000462539 FAM13BQ9NYF5 915 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 PLEKHG2Q9H7P9 1386 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 C4AP0C0L4 1744 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 C4BP0C0L5 1744 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 MEGF6O75095 1541 aa8.8□□□□□ -1
SREBF2-204ENST00000462539 NEURL1BA8MQ27 555 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 DTNBO60941 627 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 IGKV5-2P06315 115 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 CCDC192P0DO97 292 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 LIG1P18858 919 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 PDCP20941 246 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
SREBF2-204ENST00000462539 HMGN5P82970 282 aaKnown RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 PSME1Q06323 249 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 MAP3K11Q16584 847 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 TSGA10IPQ3SY00 556 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 TPRNQ4KMQ1 711 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 RNF20Q5VTR2 975 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 RBM43Q6ZSC3 357 aaKnown RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 ZNF589Q86UQ0 364 aaPredicted RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 C17orf53Q8N3J3 647 aaPredicted RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 MPNDQ8N594 471 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 ATF5Q9Y2D1 282 aaPredicted RBP8.79□□□□□ -1
SREBF2-204ENST00000462539 MRVI1Q9Y6F6 885 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 SHANK3Q9BYB0 1731 aa8.79□□□□□ -1
SREBF2-204ENST00000462539 RFX5P48382 616 aaPredicted RBP8.78□□□□□ -1
SREBF2-204ENST00000462539 TYRO3Q06418 890 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 RESTQ13127 1097 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 ESCO1Q5FWF5 840 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 USPL1Q5W0Q7 1092 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
SREBF2-204ENST00000462539 FAM200AQ8TCP9 573 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 BOLA2Q9H3K6 86 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 CLSTN2Q9H4D0 955 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 DDX19AQ9NUU7 478 aaKnown RBP8.78□□□□□ -1
SREBF2-204ENST00000462539 PYCARDQ9ULZ3 195 aa8.78□□□□□ -1
SREBF2-204ENST00000462539 PALLDQ8WX93 1383 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 TAF5LO75529 589 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 GCP02774 474 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 ATP5JP18859 108 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 PLCB2Q00722 1185 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 GCKRQ14397 625 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 KRT32Q14532 448 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 EPHA10Q5JZY3 1008 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 DNTTIP2Q5QJE6 756 aaKnown RBP8.77□□□□□ -1.01
SREBF2-204ENST00000462539 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 FERMT3Q86UX7 667 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 KIAA1524Q8TCG1 905 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 LEO1Q8WVC0 666 aaPredicted RBP8.77□□□□□ -1.01
SREBF2-204ENST00000462539 GTF3C6Q969F1 213 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 TCEANC2Q96MN5 208 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
SREBF2-204ENST00000462539 SCAND2PQ9GZW5 306 aaPredicted RBP8.77□□□□□ -1.01
SREBF2-204ENST00000462539 SIL1Q9H173 461 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 COPRSQ9NQ92 184 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 NPHP3Q7Z494 1330 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
SREBF2-204ENST00000462539 GOLGA6L6A8MZA4 724 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 NEXNQ0ZGT2 675 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 AIMP1Q12904 312 aaKnown RBP8.76□□□□□ -1.01
SREBF2-204ENST00000462539 TNNI3KQ59H18 835 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 FAM173BQ6P4H8 233 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 LRP10Q7Z4F1 713 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 ANKLE2Q86XL3 938 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 ZNF710Q8N1W2 664 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 TDRD7Q8NHU6 1098 aaKnown RBP8.76□□□□□ -1.01
SREBF2-204ENST00000462539 KLHDC4Q8TBB5 520 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 XAGE3Q8WTP9 111 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 MYD88Q99836 296 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 TNMDQ9H2S6 317 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 SLC52A2Q9HAB3 445 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 DBNLQ9UJU6 430 aaKnown RBP8.76□□□□□ -1.01
SREBF2-204ENST00000462539 U3KPZ7 1027 aaPredicted RBP8.76□□□□□ -1.01
SREBF2-204ENST00000462539 FPGT-TNNI3KV9GXZ4 949 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 ERBB3P21860 1342 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 SH3TC1Q8TE82 1336 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 STRCP1A6NGW2 1772 aa8.76□□□□□ -1.01
SREBF2-204ENST00000462539 ABCA3Q99758 1704 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.75□□□□□ -1.01
SREBF2-204ENST00000462539 JAK2O60674 1132 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 RABL6Q3YEC7 729 aaPredicted RBP8.75□□□□□ -1.01
SREBF2-204ENST00000462539 ANO6Q4KMQ2 910 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 ZNF790Q6PG37 636 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.75□□□□□ -1.01
SREBF2-204ENST00000462539 BRF1Q92994 677 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 RBM33Q96EV2 1170 aaKnown RBP8.75□□□□□ -1.01
SREBF2-204ENST00000462539 EDC3Q96F86 508 aaKnown RBP8.75□□□□□ -1.01
SREBF2-204ENST00000462539 SPATA32Q96LK8 384 aa8.75□□□□□ -1.01
SREBF2-204ENST00000462539 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms