RNA–Protein interactions for RNA: ENST00000461871.1

GTF3C5-208, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 623 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-208ENST00000461871 SCN7AQ01118 1682 aa17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 ANKRD18BA2A2Z9 1011 aa17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 KCNQ4P56696 695 aa17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 SF3B3Q15393 1217 aaKnown RBP17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 CCDC152Q4G0S7 254 aa17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
GTF3C5-208ENST00000461871 MYH3P11055 1940 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 IL1RAPL2Q9NP60 686 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 ECHDC1Q9NTX5 307 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 CEP126Q9P2H0 1117 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 CHMP3Q9Y3E7 222 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 LRP5O75197 1615 aa17.28■□□□□ 0.36
GTF3C5-208ENST00000461871 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.27■□□□□ 0.36
GTF3C5-208ENST00000461871 CDC45O75419 566 aa17.27■□□□□ 0.36
GTF3C5-208ENST00000461871 RTL5Q5HYW3 569 aaPredicted RBP17.27■□□□□ 0.36
GTF3C5-208ENST00000461871 ATG9AQ7Z3C6 839 aa17.27■□□□□ 0.36
GTF3C5-208ENST00000461871 GSPT1P15170 499 aaKnown RBP17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 ITGA6P23229 1130 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 OTUD7AQ8TE49 926 aaPredicted RBP17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
GTF3C5-208ENST00000461871 RIC1Q4ADV7 1423 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 TNNI3KQ59H18 835 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 AACSQ86V21 672 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 EAF2Q96CJ1 260 aaPredicted RBP17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 SIL1Q9H173 461 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 RIPOR2Q9Y4F9 1068 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 FPGT-TNNI3KV9GXZ4 949 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 CARMIL3Q8ND23 1372 aa17.25■□□□□ 0.35
GTF3C5-208ENST00000461871 SDSP20132 328 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 GTF2E1P29083 439 aaPredicted RBP17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 LDHAL6AQ6ZMR3 332 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 SYNE4Q8N205 404 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 NLGN1Q8N2Q7 840 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 PI4K2BQ8TCG2 481 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 NLRP3Q96P20 1036 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 CDC5LQ99459 802 aaKnown RBP17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 LAMB2P55268 1798 aa17.24■□□□□ 0.35
GTF3C5-208ENST00000461871 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 TM4SF1P30408 202 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 TFCP2Q12800 502 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 KLHDC4Q8TBB5 520 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 GREM2Q9H772 168 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 COL24A1Q17RW2 1714 aa17.23■□□□□ 0.35
GTF3C5-208ENST00000461871 GYS1P13807 737 aa17.22■□□□□ 0.35
GTF3C5-208ENST00000461871 ATP5JP18859 108 aa17.22■□□□□ 0.35
GTF3C5-208ENST00000461871 NUTM1Q86Y26 1132 aa17.22■□□□□ 0.35
GTF3C5-208ENST00000461871 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
GTF3C5-208ENST00000461871 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
GTF3C5-208ENST00000461871 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 SF3B2Q13435 895 aaKnown RBP17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 NFIXQ14938 502 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 IL27Q8NEV9 243 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 EVI5LQ96CN4 794 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 TFCP2L1Q9NZI6 479 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 TNS1Q9HBL0 1735 aaKnown RBP17.21■□□□□ 0.35
GTF3C5-208ENST00000461871 ABCC12Q96J65 1359 aa17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 HIP1O00291 1037 aa17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 IGHMBP2P38935 993 aaKnown RBP17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 ANP32AP39687 249 aaKnown RBP17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 ERFEQ4G0M1 354 aa17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
GTF3C5-208ENST00000461871 PHF14O94880 888 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 PDE8BO95263 885 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 BAG6P46379 1132 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 LRRC24Q50LG9 513 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 AMIGO3Q86WK7 504 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 ZNF594Q96JF6 807 aaPredicted RBP17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 ZNF512BQ96KM6 892 aaPredicted RBP17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
GTF3C5-208ENST00000461871 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
GTF3C5-208ENST00000461871 REC8O95072 547 aa17.18■□□□□ 0.34
GTF3C5-208ENST00000461871 CCDC8Q9H0W5 538 aaPredicted RBP17.18■□□□□ 0.34
GTF3C5-208ENST00000461871 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
GTF3C5-208ENST00000461871 TRIM6-TRIM34B2RNG4 842 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 ZBTB22O15209 634 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 METTL24Q5JXM2 366 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 BICDL1Q6ZP65 573 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 TBC1D32Q96NH3 1257 aa17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 PUS3Q9BZE2 481 aaKnown RBP17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 DBNLQ9UJU6 430 aaKnown RBP17.17■□□□□ 0.34
GTF3C5-208ENST00000461871 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
GTF3C5-208ENST00000461871 ST5P78524 1137 aa17.16■□□□□ 0.34
GTF3C5-208ENST00000461871 CCDC158Q5M9N0 1113 aa17.16■□□□□ 0.34
GTF3C5-208ENST00000461871 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
GTF3C5-208ENST00000461871 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
GTF3C5-208ENST00000461871 LPIN2Q92539 896 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms