RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 COL14A1Q05707 1796 aaKnown RBP8.29□□□□□ -1.08
SPTA1-202ENST00000461624 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 CLTCL1P53675 1640 aa8.29□□□□□ -1.08
SPTA1-202ENST00000461624 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 ATP5J2-PTCD1G3V325 749 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 APBB1O00213 710 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 RNF144AP50876 292 aaPredicted RBP8.28□□□□□ -1.08
SPTA1-202ENST00000461624 KCNMA1Q12791 1236 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 PPP1R1BQ9UD71 204 aaPredicted RBP8.28□□□□□ -1.08
SPTA1-202ENST00000461624 ZNF330Q9Y3S2 320 aaPredicted RBP8.28□□□□□ -1.08
SPTA1-202ENST00000461624 SHANK3Q9BYB0 1731 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 CRYBG1Q9Y4K1 1723 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 TECPR2O15040 1411 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 SPATA31A5Q5VU36 1347 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 SPATA31A7Q8IWB4 1347 aa8.28□□□□□ -1.08
SPTA1-202ENST00000461624 GIGYF1O75420 1035 aaPredicted RBP8.27□□□□□ -1.09
SPTA1-202ENST00000461624 TRIM37O94972 964 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 SLURP2P0DP57 97 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 GPC1P35052 558 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 NR1H3Q13133 447 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 RNFT1Q5M7Z0 435 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 VWA5B2Q8N398 1253 aa8.27□□□□□ -1.09
SPTA1-202ENST00000461624 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
SPTA1-202ENST00000461624 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.09
SPTA1-202ENST00000461624 SBNO1A3KN83 1393 aa8.26□□□□□ -1.09
SPTA1-202ENST00000461624 RGPD8O14715 1765 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-202ENST00000461624 RNF225M0QZC1 329 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-202ENST00000461624 ERVK-9P63128 1117 aa8.26□□□□□ -1.09
SPTA1-202ENST00000461624 CC2D2BQ6DHV5 1058 aa8.26□□□□□ -1.09
SPTA1-202ENST00000461624 NDUFB9Q9Y6M9 179 aa8.26□□□□□ -1.09
SPTA1-202ENST00000461624 TRPM3Q9HCF6 1732 aaPredicted RBP8.26□□□□□ -1.09
SPTA1-202ENST00000461624 ALS2Q96Q42 1657 aa8.25□□□□□ -1.09
SPTA1-202ENST00000461624 FAM196AQ6ZSG2 479 aa8.25□□□□□ -1.09
SPTA1-202ENST00000461624 GMCL1Q96IK5 515 aa8.25□□□□□ -1.09
SPTA1-202ENST00000461624 APBA3O96018 575 aa8.24□□□□□ -1.09
SPTA1-202ENST00000461624 ZNF385CQ66K41 422 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-202ENST00000461624 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
SPTA1-202ENST00000461624 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
SPTA1-202ENST00000461624 PDGFDQ9GZP0 370 aaPredicted RBP8.24□□□□□ -1.09
SPTA1-202ENST00000461624 NRXN1Q9ULB1 1477 aa8.24□□□□□ -1.09
SPTA1-202ENST00000461624 ARHGEF10O15013 1369 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 KNDC1Q76NI1 1749 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 PEAK1Q9H792 1746 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 IFT172Q9UG01 1749 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 PPLO60437 1756 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 NBPF8Q3BBV2 869 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 SVOPQ8N4V2 548 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 BTG4Q9NY30 223 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 ADAMTS8Q9UP79 889 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 KIF1BO60333 1816 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
SPTA1-202ENST00000461624 GPR37L1O60883 481 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 ZNF326Q5BKZ1 582 aaKnown RBP8.22□□□□□ -1.09
SPTA1-202ENST00000461624 PRICKLE2Q7Z3G6 844 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 MTMR14Q8NCE2 650 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 SPATA31A1Q5TZJ5 1347 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 MAP3K5Q99683 1374 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 PLEKHH1Q9ULM0 1364 aa8.22□□□□□ -1.09
SPTA1-202ENST00000461624 A0A1W2PRU2 124 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 MEN1O00255 615 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 GSK3AP49840 483 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 SRSF11Q05519 484 aaKnown RBP8.21□□□□□ -1.1
SPTA1-202ENST00000461624 TRIM22Q8IYM9 498 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 SYT17Q9BSW7 474 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 SBF2Q86WG5 1849 aa8.21□□□□□ -1.1
SPTA1-202ENST00000461624 RHOQP17081 205 aa8.2□□□□□ -1.1
SPTA1-202ENST00000461624 CLN3Q13286 438 aa8.2□□□□□ -1.1
SPTA1-202ENST00000461624 NLRP3Q96P20 1036 aa8.2□□□□□ -1.1
SPTA1-202ENST00000461624 FHDC1Q9C0D6 1143 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-202ENST00000461624 CUEDC1Q9NWM3 386 aaPredicted RBP8.2□□□□□ -1.1
SPTA1-202ENST00000461624 PCDHB11Q9Y5F2 797 aa8.2□□□□□ -1.1
SPTA1-202ENST00000461624 NUP155O75694 1391 aa8.2□□□□□ -1.1
SPTA1-202ENST00000461624 TRAK2O60296 914 aa8.19□□□□□ -1.1
SPTA1-202ENST00000461624 ARHGEF15O94989 841 aa8.19□□□□□ -1.1
SPTA1-202ENST00000461624 ZNF837Q96EG3 531 aaPredicted RBP8.19□□□□□ -1.1
SPTA1-202ENST00000461624 DYRK1BQ9Y463 629 aa8.19□□□□□ -1.1
SPTA1-202ENST00000461624 PARP4Q9UKK3 1724 aaKnown RBP8.19□□□□□ -1.1
SPTA1-202ENST00000461624 ROCK1Q13464 1354 aa8.19□□□□□ -1.1
SPTA1-202ENST00000461624 ZBTB7AO95365 584 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 SCTRP47872 440 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 GAS6Q14393 721 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 WDR44Q5JSH3 913 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 SLC27A3Q5K4L6 730 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 FOXR1Q6PIV2 292 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 WAPLQ7Z5K2 1190 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 WHAMMQ8TF30 809 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 OSBPL3Q9H4L5 887 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 ABCC11Q96J66 1382 aa8.18□□□□□ -1.1
SPTA1-202ENST00000461624 SPATA31C2B4DYI2 1134 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 H7C1W4 665 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 RASSF7Q02833 373 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 PSME1Q06323 249 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 FLIIQ13045 1269 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 TMEM151AQ8N4L1 468 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 GRIP2Q9C0E4 1043 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 PRM3Q9NNZ6 103 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 SNRKQ9NRH2 765 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 COL24A1Q17RW2 1714 aa8.17□□□□□ -1.1
SPTA1-202ENST00000461624 PLSCR1O15162 318 aa8.16□□□□□ -1.1
SPTA1-202ENST00000461624 GDF11O95390 407 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms