RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 LAMB2P55268 1798 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 POTECB2RU33 542 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 F6X3S4 739 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 IRS4O14654 1257 aaPredicted RBP12.89□□□□□ -0.35
SYN3-206ENST00000461446 IARSP41252 1262 aaKnown RBP12.89□□□□□ -0.35
SYN3-206ENST00000461446 NEXNQ0ZGT2 675 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 C16orf71Q8IYS4 520 aaPredicted RBP12.89□□□□□ -0.35
SYN3-206ENST00000461446 ARHGAP45Q92619 1136 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 RCAN3Q9UKA8 241 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 TAF1P21675 1872 aa12.89□□□□□ -0.35
SYN3-206ENST00000461446 IGKV5-2P06315 115 aa12.88□□□□□ -0.35
SYN3-206ENST00000461446 VEGFAP15692 232 aaPredicted RBP12.88□□□□□ -0.35
SYN3-206ENST00000461446 HSPA6P17066 643 aa12.88□□□□□ -0.35
SYN3-206ENST00000461446 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
SYN3-206ENST00000461446 ZBTB38Q8NAP3 1195 aaPredicted RBP12.88□□□□□ -0.35
SYN3-206ENST00000461446 PSMD1Q99460 953 aa12.88□□□□□ -0.35
SYN3-206ENST00000461446 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
SYN3-206ENST00000461446 ZNF541Q9H0D2 1346 aa12.88□□□□□ -0.35
SYN3-206ENST00000461446 IPO8O15397 1037 aaKnown RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 BBOX1O75936 387 aa12.87□□□□□ -0.35
SYN3-206ENST00000461446 GRAPQ13588 217 aa12.87□□□□□ -0.35
SYN3-206ENST00000461446 BEND3Q5T5X7 828 aa12.87□□□□□ -0.35
SYN3-206ENST00000461446 CCDC191Q8NCU4 936 aa12.87□□□□□ -0.35
SYN3-206ENST00000461446 LINS1Q8NG48 757 aa12.87□□□□□ -0.35
SYN3-206ENST00000461446 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 CWC25Q9NXE8 425 aaPredicted RBP12.87□□□□□ -0.35
SYN3-206ENST00000461446 COL4A5P29400 1685 aa12.86□□□□□ -0.35
SYN3-206ENST00000461446 SF3B3Q15393 1217 aaKnown RBP12.86□□□□□ -0.35
SYN3-206ENST00000461446 CWF19L2Q2TBE0 894 aaKnown RBP12.86□□□□□ -0.35
SYN3-206ENST00000461446 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
SYN3-206ENST00000461446 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
SYN3-206ENST00000461446 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
SYN3-206ENST00000461446 COL4A1P02462 1669 aa12.86□□□□□ -0.35
SYN3-206ENST00000461446 NEURL1BA8MQ27 555 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 FZD9O00144 591 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 PCCAP05165 728 aaPredicted RBP12.85□□□□□ -0.35
SYN3-206ENST00000461446 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 ATF7IPQ6VMQ6 1270 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 LARGE2Q8N3Y3 721 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 CCDC85AQ96PX6 553 aaPredicted RBP12.85□□□□□ -0.35
SYN3-206ENST00000461446 TMX4Q9H1E5 349 aaPredicted RBP12.85□□□□□ -0.35
SYN3-206ENST00000461446 WDR90Q96KV7 1748 aa12.85□□□□□ -0.35
SYN3-206ENST00000461446 ALDH1L1O75891 902 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 TRIM27P14373 513 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 GCKRQ14397 625 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 AOC3Q16853 763 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 GRIPAP1Q4V328 841 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 DPP8Q6V1X1 898 aaPredicted RBP12.84□□□□□ -0.35
SYN3-206ENST00000461446 MPNDQ8N594 471 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 SRCIN1Q9C0H9 1055 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
SYN3-206ENST00000461446 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 POTEJP0CG39 1038 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 HTRA3P83110 453 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 FSTL1Q12841 308 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 SMC1BQ8NDV3 1235 aa12.83□□□□□ -0.36
SYN3-206ENST00000461446 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
SYN3-206ENST00000461446 H7C1W4 665 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 PDE8AO60658 829 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
SYN3-206ENST00000461446 RPS8P62241 208 aaKnown RBP12.82□□□□□ -0.36
SYN3-206ENST00000461446 UBE3BQ7Z3V4 1068 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 NIM1KQ8IY84 436 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
SYN3-206ENST00000461446 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 GJA3Q9Y6H8 435 aa12.82□□□□□ -0.36
SYN3-206ENST00000461446 EIF6P56537 245 aaKnown RBP12.81□□□□□ -0.36
SYN3-206ENST00000461446 GPSM2P81274 684 aa12.81□□□□□ -0.36
SYN3-206ENST00000461446 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
SYN3-206ENST00000461446 CLUAP1Q96AJ1 413 aa12.81□□□□□ -0.36
SYN3-206ENST00000461446 TAF1DQ9H5J8 278 aaPredicted RBP12.81□□□□□ -0.36
SYN3-206ENST00000461446 NSFL1CQ9UNZ2 370 aaKnown RBP12.81□□□□□ -0.36
SYN3-206ENST00000461446 GRM8O00222 908 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 HSP90B1P14625 803 aaKnown RBP12.8□□□□□ -0.36
SYN3-206ENST00000461446 APLP1P51693 650 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 CASP7P55210 303 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 CTSWP56202 376 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 CCDC152Q4G0S7 254 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 TMC4Q7Z404 712 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 GPC2Q8N158 579 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 SUPT20HQ8NEM7 779 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 GPR101Q96P66 508 aaPredicted RBP12.8□□□□□ -0.36
SYN3-206ENST00000461446 CEP350Q5VT06 3117 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 CDHR2Q9BYE9 1310 aa12.8□□□□□ -0.36
SYN3-206ENST00000461446 DUOX1Q9NRD9 1551 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 IQCA1LA6NCM1 817 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 PLIN1O60240 522 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 MS4A1P11836 297 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 RLBP1P12271 317 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 KIAA2012Q0VF49 1180 aa12.79□□□□□ -0.36
SYN3-206ENST00000461446 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
SYN3-206ENST00000461446 DZIP1LQ8IYY4 767 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms