RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ODF2LQ9ULJ1 636 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 SNX16P57768 344 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 ARFGAP2Q8N6H7 521 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC8Q9H0W5 538 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-205ENST00000461221 SYKP43405 635 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 CCDC144CPQ8IYA2 1237 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 ZSWIM4Q9H7M6 989 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 CDC5LQ99459 802 aaKnown RBP10.24□□□□□ -0.77
BRCA1-205ENST00000461221 SLC26A6Q9BXS9 759 aa10.24□□□□□ -0.77
BRCA1-205ENST00000461221 PTPRCP08575 1304 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 STAT6P42226 847 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 SETDB1Q15047 1291 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 JAKMIP2Q96AA8 810 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 NEK1Q96PY6 1258 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 SELENOSQ9BQE4 189 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 ECHDC1Q9NTX5 307 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 TXNDC16Q9P2K2 825 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 PPFIBP2Q8ND30 876 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 SMC1BQ8NDV3 1235 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 KCNG4Q8TDN1 519 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 GOLGA1Q92805 767 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 KIF21BO75037 1637 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 CTAGE9A4FU28 777 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 PSMA7O14818 248 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 RBM25P49756 843 aaKnown RBP10.23□□□□□ -0.77
BRCA1-205ENST00000461221 MRVI1Q9Y6F6 885 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 NSD3Q9BZ95 1437 aa10.23□□□□□ -0.77
BRCA1-205ENST00000461221 CFAP58Q5T655 872 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 CRNKL1Q9BZJ0 848 aaKnown RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 TFIP11Q9UBB9 837 aaKnown RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 WIZO95785 1651 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 PAXIP1Q6ZW49 1069 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 KRT23Q9C075 422 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 VAT1LQ9HCJ6 419 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 MTRF1LQ9UGC7 380 aaKnown RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 CASKIN1Q8WXD9 1431 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 KRT86O43790 486 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 UQCRFS1P1P0C7P4 283 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 CFAP157Q5JU67 520 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 FMNL3Q8IVF7 1028 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 TMTC2Q8N394 836 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 SYNJ2O15056 1496 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 EBAG9O00559 213 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 TUBBP07437 444 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 ZFYP08048 801 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 LRSAM1Q6UWE0 723 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 TEX13AQ9BXU3 409 aaPredicted RBP10.22□□□□□ -0.77
BRCA1-205ENST00000461221 SAMD15Q9P1V8 674 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 KIF3CO14782 793 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 CIB2O75838 187 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 KLHL40Q2TBA0 621 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 MICU3Q86XE3 530 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 TRIM7Q9C029 511 aa10.22□□□□□ -0.77
BRCA1-205ENST00000461221 GNAQP50148 359 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 CEP128Q6ZU80 1094 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 MICALL1Q8N3F8 863 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 PANK2Q9BZ23 570 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-205ENST00000461221 FAM169AQ9Y6X4 670 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 NKTRP30414 1462 aaKnown RBP10.21□□□□□ -0.77
BRCA1-205ENST00000461221 NBPF11Q86T75 865 aa10.21□□□□□ -0.77
BRCA1-205ENST00000461221 RSRC1Q96IZ7 334 aaKnown RBP10.21□□□□□ -0.77
BRCA1-205ENST00000461221 SH3BP5O60239 455 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 PTCD1O75127 700 aaKnown RBP10.21□□□□□ -0.78
BRCA1-205ENST00000461221 EEF2P13639 858 aaKnown RBP10.21□□□□□ -0.78
BRCA1-205ENST00000461221 LACTBP83111 547 aaPredicted RBP10.21□□□□□ -0.78
BRCA1-205ENST00000461221 TTC16Q8NEE8 873 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 POGZQ7Z3K3 1410 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 B4DLN1 442 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 MRPL12P52815 198 aaKnown RBP10.21□□□□□ -0.78
BRCA1-205ENST00000461221 KIF5AQ12840 1032 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 WTAPQ15007 396 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 CNNM2Q9H8M5 875 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 DNAI1Q9UI46 699 aa10.21□□□□□ -0.78
BRCA1-205ENST00000461221 C6orf229H3BNL8 230 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 SKILP12757 684 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 NCBP1Q09161 790 aaKnown RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 MCM10Q7L590 875 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CPLX4Q7Z7G2 160 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CCDC50Q8IVM0 306 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ATP5DP30049 168 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CWC25Q9NXE8 425 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ZHX1Q9UKY1 873 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 BICDL2A1A5D9 508 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 FAM13AO94988 1023 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 MCM6Q14566 821 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 GAS8O95995 478 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ZSCAN22P10073 491 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CA8P35219 290 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 TTC31Q49AM3 519 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 RNF216Q9NWF9 866 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 SWAP70Q9UH65 585 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CAPN2P17655 700 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 RARSP54136 660 aaKnown RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ZC3H6P61129 1189 aaKnown RBP10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ERCC6LQ2NKX8 1250 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 ISM2Q6H9L7 571 aa10.2□□□□□ -0.78
BRCA1-205ENST00000461221 CEP57Q86XR8 500 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms