RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 RAD17O75943 681 aa22.81■■□□□ 1.24
TOP3A-202ENST00000461127 HIRAP54198 1017 aaPredicted RBP22.81■■□□□ 1.24
TOP3A-202ENST00000461127 KIAA2012Q0VF49 1180 aa22.81■■□□□ 1.24
TOP3A-202ENST00000461127 GIGYF2Q6Y7W6 1299 aaKnown RBP22.81■■□□□ 1.24
TOP3A-202ENST00000461127 MPNDQ8N594 471 aa22.81■■□□□ 1.24
TOP3A-202ENST00000461127 TRPM4Q8TD43 1214 aa22.81■■□□□ 1.24
TOP3A-202ENST00000461127 SAGE1Q9NXZ1 904 aa22.81■■□□□ 1.24
TOP3A-202ENST00000461127 CNOT7Q9UIV1 285 aaKnown RBP22.81■■□□□ 1.24
TOP3A-202ENST00000461127 NEFMP07197 916 aa22.8■■□□□ 1.24
TOP3A-202ENST00000461127 USP48Q86UV5 1035 aa22.8■■□□□ 1.24
TOP3A-202ENST00000461127 SP8Q8IXZ3 490 aa22.8■■□□□ 1.24
TOP3A-202ENST00000461127 ZIC5Q96T25 663 aa22.8■■□□□ 1.24
TOP3A-202ENST00000461127 ABCC4O15439 1325 aa22.8■■□□□ 1.24
TOP3A-202ENST00000461127 UTP14AQ9BVJ6 771 aaKnown RBP22.79■■□□□ 1.24
TOP3A-202ENST00000461127 SLC10A5Q5PT55 438 aa22.78■■□□□ 1.24
TOP3A-202ENST00000461127 RGMBQ6NW40 437 aa22.78■■□□□ 1.24
TOP3A-202ENST00000461127 CCDC102AQ96A19 550 aa22.78■■□□□ 1.24
TOP3A-202ENST00000461127 SOX10P56693 466 aa22.77■■□□□ 1.24
TOP3A-202ENST00000461127 EIF4A1P60842 406 aaKnown RBP22.77■■□□□ 1.24
TOP3A-202ENST00000461127 MICALL2Q8IY33 904 aa22.77■■□□□ 1.24
TOP3A-202ENST00000461127 C2orf69Q8N8R5 385 aa22.77■■□□□ 1.24
TOP3A-202ENST00000461127 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
TOP3A-202ENST00000461127 GBA2Q9HCG7 927 aaPredicted RBP22.76■■□□□ 1.23
TOP3A-202ENST00000461127 KDM3BQ7LBC6 1761 aa22.76■■□□□ 1.23
TOP3A-202ENST00000461127 DDX46Q7L014 1031 aaKnown RBP22.75■■□□□ 1.23
TOP3A-202ENST00000461127 KRT26Q7Z3Y9 468 aa22.75■■□□□ 1.23
TOP3A-202ENST00000461127 DPF2Q92785 391 aa22.75■■□□□ 1.23
TOP3A-202ENST00000461127 PRPF38BQ5VTL8 546 aaKnown RBP22.74■■□□□ 1.23
TOP3A-202ENST00000461127 FAM155AB1AL88 458 aaPredicted RBP22.73■■□□□ 1.23
TOP3A-202ENST00000461127 TRPA1O75762 1119 aa22.73■■□□□ 1.23
TOP3A-202ENST00000461127 ZNF157P51786 506 aaPredicted RBP22.73■■□□□ 1.23
TOP3A-202ENST00000461127 KIF23Q02241 960 aaPredicted RBP22.73■■□□□ 1.23
TOP3A-202ENST00000461127 TMC4Q7Z404 712 aa22.73■■□□□ 1.23
TOP3A-202ENST00000461127 DCPSQ96C86 337 aaKnown RBP22.73■■□□□ 1.23
TOP3A-202ENST00000461127 SHTN1A0MZ66 631 aa22.72■■□□□ 1.23
TOP3A-202ENST00000461127 YDJCA8MPS7 323 aa22.72■■□□□ 1.23
TOP3A-202ENST00000461127 RNF186Q9NXI6 227 aa22.72■■□□□ 1.23
TOP3A-202ENST00000461127 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
TOP3A-202ENST00000461127 GRAPQ13588 217 aa22.71■■□□□ 1.23
TOP3A-202ENST00000461127 SAMD7Q7Z3H4 446 aa22.71■■□□□ 1.23
TOP3A-202ENST00000461127 GRAPLQ8TC17 118 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-202ENST00000461127 ZBTB12Q9Y330 459 aaPredicted RBP22.71■■□□□ 1.23
TOP3A-202ENST00000461127 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
TOP3A-202ENST00000461127 TBC1D10BQ4KMP7 808 aaPredicted RBP22.7■■□□□ 1.22
TOP3A-202ENST00000461127 HSP90AB3PQ58FF7 597 aa22.7■■□□□ 1.22
TOP3A-202ENST00000461127 CTU1Q7Z7A3 348 aaKnown RBP22.7■■□□□ 1.22
TOP3A-202ENST00000461127 ANKRD36CQ5JPF3 1778 aa22.7■■□□□ 1.22
TOP3A-202ENST00000461127 HCLS1P14317 486 aaPredicted RBP22.69■■□□□ 1.22
TOP3A-202ENST00000461127 RPS12P25398 132 aaKnown RBP22.69■■□□□ 1.22
TOP3A-202ENST00000461127 DLK2Q6UY11 383 aa22.69■■□□□ 1.22
TOP3A-202ENST00000461127 DLG5Q8TDM6 1919 aa22.69■■□□□ 1.22
TOP3A-202ENST00000461127 PSMD14O00487 310 aa22.68■■□□□ 1.22
TOP3A-202ENST00000461127 WASHC4Q2M389 1173 aa22.68■■□□□ 1.22
TOP3A-202ENST00000461127 REM2Q8IYK8 340 aaPredicted RBP22.68■■□□□ 1.22
TOP3A-202ENST00000461127 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
TOP3A-202ENST00000461127 POLR2AP24928 1970 aaKnown RBP22.68■■□□□ 1.22
TOP3A-202ENST00000461127 LAMB2P55268 1798 aa22.68■■□□□ 1.22
TOP3A-202ENST00000461127 RBM26Q5T8P6 1007 aaKnown RBP22.67■■□□□ 1.22
TOP3A-202ENST00000461127 SULF1Q8IWU6 871 aa22.67■■□□□ 1.22
TOP3A-202ENST00000461127 TRMT112Q9UI30 125 aaKnown RBP22.67■■□□□ 1.22
TOP3A-202ENST00000461127 SH3TC1Q8TE82 1336 aa22.66■■□□□ 1.22
TOP3A-202ENST00000461127 ADM5C9JUS6 153 aa22.66■■□□□ 1.22
TOP3A-202ENST00000461127 SLC10A3P09131 477 aa22.66■■□□□ 1.22
TOP3A-202ENST00000461127 EIF2S2P20042 333 aaKnown RBP22.66■■□□□ 1.22
TOP3A-202ENST00000461127 NLRP10Q86W26 655 aa22.66■■□□□ 1.22
TOP3A-202ENST00000461127 CSRNP1Q96S65 589 aa22.65■■□□□ 1.22
TOP3A-202ENST00000461127 DBNDD1Q9H9R9 158 aa22.65■■□□□ 1.22
TOP3A-202ENST00000461127 NFE2L2Q16236 605 aa22.64■■□□□ 1.21
TOP3A-202ENST00000461127 LRP10Q7Z4F1 713 aa22.64■■□□□ 1.21
TOP3A-202ENST00000461127 TSPYL4Q9UJ04 414 aa22.64■■□□□ 1.21
TOP3A-202ENST00000461127 NSFL1CQ9UNZ2 370 aaKnown RBP22.64■■□□□ 1.21
TOP3A-202ENST00000461127 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
TOP3A-202ENST00000461127 C6orf229H3BNL8 230 aa22.63■■□□□ 1.21
TOP3A-202ENST00000461127 RIMBP2O15034 1052 aa22.63■■□□□ 1.21
TOP3A-202ENST00000461127 EGFRP00533 1210 aa22.63■■□□□ 1.21
TOP3A-202ENST00000461127 PDIA6Q15084 440 aa22.63■■□□□ 1.21
TOP3A-202ENST00000461127 PKN2Q16513 984 aaKnown RBP22.63■■□□□ 1.21
TOP3A-202ENST00000461127 KIF4BQ2VIQ3 1234 aa22.62■■□□□ 1.21
TOP3A-202ENST00000461127 EYA3Q99504 573 aa22.62■■□□□ 1.21
TOP3A-202ENST00000461127 HPS5Q9UPZ3 1129 aa22.62■■□□□ 1.21
TOP3A-202ENST00000461127 LRRC37AA6NMS7 1700 aa22.62■■□□□ 1.21
TOP3A-202ENST00000461127 ECE2O60344 883 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 ANXA1P04083 346 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 TAF1P21675 1872 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 TCIRG1Q13488 830 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 COPS6Q7L5N1 327 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 PNNQ9H307 717 aaKnown RBP22.61■■□□□ 1.21
TOP3A-202ENST00000461127 GGA3Q9NZ52 723 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 HDAC9Q9UKV0 1011 aa22.61■■□□□ 1.21
TOP3A-202ENST00000461127 AIMP1Q12904 312 aaKnown RBP22.6■■□□□ 1.21
TOP3A-202ENST00000461127 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
TOP3A-202ENST00000461127 MAPK8IP3Q9UPT6 1336 aa22.59■■□□□ 1.21
TOP3A-202ENST00000461127 CDCA5Q96FF9 252 aa22.59■■□□□ 1.21
TOP3A-202ENST00000461127 DDX60Q8IY21 1712 aaKnown RBP22.59■■□□□ 1.21
TOP3A-202ENST00000461127 FKBP1BP68106 108 aa22.58■■□□□ 1.21
TOP3A-202ENST00000461127 DOK7Q18PE1 504 aa22.58■■□□□ 1.21
TOP3A-202ENST00000461127 RASAL3Q86YV0 1011 aa22.58■■□□□ 1.21
TOP3A-202ENST00000461127 XAGE3Q8WTP9 111 aa22.58■■□□□ 1.21
TOP3A-202ENST00000461127 PLEKHF1Q96S99 279 aa22.58■■□□□ 1.21
TOP3A-202ENST00000461127 POLLQ9UGP5 575 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms