RNA–Protein interactions for RNA: ENST00000461074.1

MCF2L2-205, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best)

Gene MCF2L2, Length 7,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-205ENST00000461074 MTIF2P46199 727 aaKnown RBP9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 WTAPQ15007 396 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 CCDC40Q4G0X9 1142 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 TTC22Q5TAA0 569 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 TAX1BP1Q86VP1 789 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 FOXO3O43524 673 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 STMN4Q9H169 189 aaPredicted RBP9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 KDM4AO75164 1064 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 CEP128Q6ZU80 1094 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 NUP88Q99567 741 aaPredicted RBP9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
MCF2L2-205ENST00000461074 MAP2K1Q02750 393 aaPredicted RBP9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 KSR2Q6VAB6 950 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 DYDC1Q8WWB3 177 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 USP16Q9Y5T5 823 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 ESPNB1AK53 854 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 LMBR1Q8WVP7 490 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 MAST3O60307 1309 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 KIAA0556O60303 1618 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 CTNNA2P26232 953 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 VSIG10Q8N0Z9 540 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 GSTTP1A0A1W2PQM5 241 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 TNNI2P48788 182 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 FSIP1Q8NA03 581 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 RBM28Q9NW13 759 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 ABCC1P33527 1531 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 ADAMTS12P58397 1594 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 TRIM27P14373 513 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 KIF4BQ2VIQ3 1234 aa9.67□□□□□ -0.86
MCF2L2-205ENST00000461074 PCDH11XQ9BZA7 1347 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 PCDH11YQ9BZA8 1340 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 INSRP06213 1382 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 KRT13P13646 458 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 CYLC1P35663 651 aaPredicted RBP9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 IFFO1Q0D2I5 559 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 NBPF14Q5TI25 921 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 SYCP3Q8IZU3 236 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 TNPO1Q92973 898 aaKnown RBP9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 PAXBP1Q9Y5B6 917 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 POLD1P28340 1107 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 ATP2B3Q16720 1220 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 BICDL2A1A5D9 508 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 TPTE2Q6XPS3 522 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 CCDC102AQ96A19 550 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 C19orf44Q9H6X5 657 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 C6orf50Q9HD87 102 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 EMILIN1Q9Y6C2 1016 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 NPATQ14207 1427 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 NPC1L1Q9UHC9 1359 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 FSD2A1L4K1 749 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 ZBTB43O43298 467 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 SPECC1LQ69YQ0 1117 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 CLIP2Q9UDT6 1046 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 GRM8O00222 908 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 TSPY3P0CV98 308 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 TSPY8P0CW00 308 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 MCMDC2Q4G0Z9 681 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 PARP10Q53GL7 1025 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 LINS1Q8NG48 757 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 DCAF5Q96JK2 942 aa9.66□□□□□ -0.86
MCF2L2-205ENST00000461074 PRAG1Q86YV5 1406 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 GNA11P29992 359 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 IMPG2Q9BZV3 1241 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 DKC1O60832 514 aaKnown RBP eCLIP9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 IL2RBP14784 551 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 SRRTQ9BXP5 876 aaKnown RBP9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 KCNG1Q9UIX4 513 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 TDRD12Q587J7 1177 aaKnown RBP9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 SYCP2Q9BX26 1530 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 MAP3K5Q99683 1374 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 IFIT1BQ5T764 474 aaKnown RBP9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 SELENOOQ9BVL4 669 aa9.65□□□□□ -0.86
MCF2L2-205ENST00000461074 FERP16591 822 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 PPP2R5BQ15173 497 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 RBM26Q5T8P6 1007 aaKnown RBP9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 CENPHQ9H3R5 247 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 USP25Q9UHP3 1055 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 PSMA7O14818 248 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 RRP9O43818 475 aaKnown RBP9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 RTN1Q16799 776 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 UBE3BQ7Z3V4 1068 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 KIAA1524Q8TCG1 905 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 RHPN1Q8TCX5 695 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 UBA5Q9GZZ9 404 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 MBIPQ9NS73 344 aa9.65□□□□□ -0.87
MCF2L2-205ENST00000461074 ATP10BO94823 1461 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 PLXNC1O60486 1568 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 NUCB1Q02818 461 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 ANKRD44Q8N8A2 993 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 AOX1Q06278 1338 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 BRAPQ7Z569 592 aa9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
MCF2L2-205ENST00000461074 C6orf163Q5TEZ5 329 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms