RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 GRM8O00222 908 aa13.98□□□□□ -0.17
APTX-209ENST00000460940 CASP7P55210 303 aa13.98□□□□□ -0.17
APTX-209ENST00000460940 ATF7IPQ6VMQ6 1270 aa13.98□□□□□ -0.17
APTX-209ENST00000460940 DDX46Q7L014 1031 aaKnown RBP13.98□□□□□ -0.17
APTX-209ENST00000460940 CTSWP56202 376 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 CCDC152Q4G0S7 254 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 C9orf78Q9NZ63 289 aaPredicted RBP13.97□□□□□ -0.17
APTX-209ENST00000460940 RTL9Q8NET4 1388 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 UTYO14607 1347 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 FRAT1Q92837 279 aaPredicted RBP13.97□□□□□ -0.17
APTX-209ENST00000460940 RCAN3Q9UKA8 241 aa13.97□□□□□ -0.17
APTX-209ENST00000460940 GOLGB1Q14789 3259 aaKnown RBP13.96□□□□□ -0.17
APTX-209ENST00000460940 TRIM27P14373 513 aa13.96□□□□□ -0.17
APTX-209ENST00000460940 GRAPQ13588 217 aa13.96□□□□□ -0.17
APTX-209ENST00000460940 TMC4Q7Z404 712 aa13.96□□□□□ -0.17
APTX-209ENST00000460940 GRAPLQ8TC17 118 aaPredicted RBP13.96□□□□□ -0.17
APTX-209ENST00000460940 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
APTX-209ENST00000460940 SLX4Q8IY92 1834 aa13.96□□□□□ -0.18
APTX-209ENST00000460940 PPEF1O14829 653 aaPredicted RBP13.95□□□□□ -0.18
APTX-209ENST00000460940 BBOX1O75936 387 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 CC2D2BQ6DHV5 1058 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 C7orf43Q8WVR3 580 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 C21orf2O43822 256 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 GRIPAP1Q4V328 841 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 CCDC93Q567U6 631 aa13.95□□□□□ -0.18
APTX-209ENST00000460940 INTS3Q68E01 1043 aaKnown RBP13.95□□□□□ -0.18
APTX-209ENST00000460940 MYH3P11055 1940 aa13.94□□□□□ -0.18
APTX-209ENST00000460940 CACNA1SQ13698 1873 aa13.94□□□□□ -0.18
APTX-209ENST00000460940 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
APTX-209ENST00000460940 TTLL11Q8NHH1 800 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
APTX-209ENST00000460940 LTBP3Q9NS15 1303 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 UTRNP46939 3433 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 CSF1RP07333 972 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 MS4A1P11836 297 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 FTSJ3Q8IY81 847 aaKnown RBP13.93□□□□□ -0.18
APTX-209ENST00000460940 RTKN2Q8IZC4 609 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
APTX-209ENST00000460940 USP44Q9H0E7 712 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 HDAC5Q9UQL6 1122 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 ATP6V0A2Q9Y487 856 aa13.93□□□□□ -0.18
APTX-209ENST00000460940 SNED1Q8TER0 1413 aa13.92□□□□□ -0.18
APTX-209ENST00000460940 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
APTX-209ENST00000460940 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
APTX-209ENST00000460940 FOXO4P98177 505 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 DZIP1LQ8IYY4 767 aaKnown RBP13.91□□□□□ -0.18
APTX-209ENST00000460940 TAOK3Q9H2K8 898 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 GREM2Q9H772 168 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 CHD4Q14839 1912 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 LRRC37AA6NMS7 1700 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 FER1L6Q2WGJ9 1857 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 NFKBIEO00221 500 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 UBTFL1P0CB47 393 aaPredicted RBP13.91□□□□□ -0.18
APTX-209ENST00000460940 RPS8P62241 208 aaKnown RBP13.91□□□□□ -0.18
APTX-209ENST00000460940 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.91□□□□□ -0.18
APTX-209ENST00000460940 CELF1Q92879 486 aaKnown RBP13.91□□□□□ -0.18
APTX-209ENST00000460940 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
APTX-209ENST00000460940 FKBP4Q02790 459 aaKnown RBP eCLIP13.9□□□□□ -0.18
APTX-209ENST00000460940 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
APTX-209ENST00000460940 ANKRD18AQ8IVF6 992 aa13.9□□□□□ -0.18
APTX-209ENST00000460940 CLUAP1Q96AJ1 413 aa13.9□□□□□ -0.18
APTX-209ENST00000460940 CCDC85AQ96PX6 553 aaPredicted RBP13.9□□□□□ -0.18
APTX-209ENST00000460940 PSMD1Q99460 953 aa13.9□□□□□ -0.18
APTX-209ENST00000460940 SEC31BQ9NQW1 1179 aa13.9□□□□□ -0.18
APTX-209ENST00000460940 GNAI3P08754 354 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 RABL6Q3YEC7 729 aaPredicted RBP13.89□□□□□ -0.19
APTX-209ENST00000460940 TMEM57Q8N5G2 664 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 TNNQ9UQP3 1299 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 ANKRD18BA2A2Z9 1011 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 LMNB1P20700 586 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 ITGA6P23229 1130 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 RASSF7Q02833 373 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 LMBR1LQ6UX01 489 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 KAZALD1Q96I82 304 aa13.89□□□□□ -0.19
APTX-209ENST00000460940 COL4A1P02462 1669 aa13.88□□□□□ -0.19
APTX-209ENST00000460940 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
APTX-209ENST00000460940 IFIT5Q13325 482 aaKnown RBP13.88□□□□□ -0.19
APTX-209ENST00000460940 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
APTX-209ENST00000460940 BICC1Q9H694 974 aaKnown RBP13.88□□□□□ -0.19
APTX-209ENST00000460940 CHMP3Q9Y3E7 222 aa13.88□□□□□ -0.19
APTX-209ENST00000460940 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
APTX-209ENST00000460940 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 SUPT20HQ8NEM7 779 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 MEIS3Q99687 375 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
APTX-209ENST00000460940 RLBP1P12271 317 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 C9orf131Q5VYM1 1079 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 DPP8Q6V1X1 898 aaPredicted RBP13.87□□□□□ -0.19
APTX-209ENST00000460940 ITPRIPQ8IWB1 547 aa13.87□□□□□ -0.19
APTX-209ENST00000460940 RTFDC1Q9BY42 306 aaPredicted RBP13.87□□□□□ -0.19
APTX-209ENST00000460940 TAF1P21675 1872 aa13.86□□□□□ -0.19
APTX-209ENST00000460940 MPNDQ8N594 471 aa13.86□□□□□ -0.19
APTX-209ENST00000460940 VPS33BQ9H267 617 aa13.86□□□□□ -0.19
APTX-209ENST00000460940 RNF181Q9P0P0 153 aa13.86□□□□□ -0.19
APTX-209ENST00000460940 LTBP1Q14766 1721 aa13.85□□□□□ -0.19
APTX-209ENST00000460940 YY1P25490 414 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms