RNA–Protein interactions for RNA: ENST00000460783.1

SIM2-203, Transcript of SIM bHLH transcription factor 2, humanhuman

TSL 1 (best)

Gene SIM2, Length 2,235 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-203ENST00000460783 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.92■■■□□ 2.22
SIM2-203ENST00000460783 VPS37CA5D8V6 355 aaPredicted RBP28.92■■■□□ 2.22
SIM2-203ENST00000460783 TOB2Q14106 344 aaPredicted RBP28.92■■■□□ 2.22
SIM2-203ENST00000460783 TCEANC2Q96MN5 208 aa28.92■■■□□ 2.22
SIM2-203ENST00000460783 ATF3P18847 181 aa28.91■■■□□ 2.22
SIM2-203ENST00000460783 CHRNA2Q15822 529 aa28.91■■■□□ 2.22
SIM2-203ENST00000460783 HMG20BQ9P0W2 317 aa28.91■■■□□ 2.22
SIM2-203ENST00000460783 CSPP1Q1MSJ5 1256 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 ATP5J2-PTCD1G3V325 749 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 PTCD1O75127 700 aaKnown RBP28.9■■■□□ 2.22
SIM2-203ENST00000460783 TPM2P07951 284 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 ANKRD1Q15327 319 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 TPRNQ4KMQ1 711 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 FUCA2Q9BTY2 467 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 TMEM94Q12767 1356 aa28.9■■■□□ 2.22
SIM2-203ENST00000460783 LARP1BQ659C4 914 aaKnown RBP28.89■■■□□ 2.22
SIM2-203ENST00000460783 LAMB4A4D0S4 1761 aa28.89■■■□□ 2.22
SIM2-203ENST00000460783 A0A087WZG4 1122 aa28.88■■■□□ 2.21
SIM2-203ENST00000460783 KLHL34Q8N239 644 aa28.88■■■□□ 2.21
SIM2-203ENST00000460783 NDUFB9Q9Y6M9 179 aa28.88■■■□□ 2.21
SIM2-203ENST00000460783 STRCP1A6NGW2 1772 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 RFX7Q2KHR2 1363 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 DCCP43146 1447 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 TNS3Q68CZ2 1445 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 PDIA4P13667 645 aaKnown RBP28.87■■■□□ 2.21
SIM2-203ENST00000460783 HCLS1P14317 486 aaPredicted RBP28.87■■■□□ 2.21
SIM2-203ENST00000460783 CDC37L1Q7L3B6 337 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 PLBD2Q8NHP8 589 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 DBNDD2Q9BQY9 259 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 ZNF609O15014 1411 aa28.87■■■□□ 2.21
SIM2-203ENST00000460783 CABP4P57796 275 aa28.86■■■□□ 2.21
SIM2-203ENST00000460783 CHGBP05060 677 aa28.86■■■□□ 2.21
SIM2-203ENST00000460783 PARP4Q9UKK3 1724 aaKnown RBP28.86■■■□□ 2.21
SIM2-203ENST00000460783 HAUS7Q99871 368 aa28.85■■■□□ 2.21
SIM2-203ENST00000460783 PDCP20941 246 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 GIMAP6Q6P9H5 292 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 TTC6Q86TZ1 520 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 USP25Q9UHP3 1055 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 NBPF26B4DH59 902 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 TERF1P54274 439 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 NBPF14Q5TI25 921 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 NBPF10Q6P3W6 841 aaKnown RBP28.84■■■□□ 2.21
SIM2-203ENST00000460783 NBPF15Q8N660 670 aa28.84■■■□□ 2.21
SIM2-203ENST00000460783 FOXO4P98177 505 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 FERMT3Q86UX7 667 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 SEC62Q99442 399 aaKnown RBP28.82■■■□□ 2.2
SIM2-203ENST00000460783 CPDO75976 1380 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 KRT32Q14532 448 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 LMBR1LQ6UX01 489 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 CCDC129Q6ZRS4 1044 aa28.82■■■□□ 2.2
SIM2-203ENST00000460783 H7C1W4 665 aa28.81■■■□□ 2.2
SIM2-203ENST00000460783 FAM173BQ6P4H8 233 aa28.81■■■□□ 2.2
SIM2-203ENST00000460783 DNAJC2Q99543 621 aaKnown RBP28.81■■■□□ 2.2
SIM2-203ENST00000460783 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.81■■■□□ 2.2
SIM2-203ENST00000460783 ELP1O95163 1332 aa28.81■■■□□ 2.2
SIM2-203ENST00000460783 KRT85P78386 507 aa28.81■■■□□ 2.2
SIM2-203ENST00000460783 SPATA31A3Q5VYP0 1347 aa28.81■■■□□ 2.2
SIM2-203ENST00000460783 PTMAP06454 111 aaKnown RBP28.8■■■□□ 2.2
SIM2-203ENST00000460783 ADCY5O95622 1261 aa28.79■■■□□ 2.2
SIM2-203ENST00000460783 ATG9AQ7Z3C6 839 aa28.79■■■□□ 2.2
SIM2-203ENST00000460783 NEK1Q96PY6 1258 aa28.79■■■□□ 2.2
SIM2-203ENST00000460783 U3KPZ7 1027 aaPredicted RBP28.79■■■□□ 2.2
SIM2-203ENST00000460783 NUP188Q5SRE5 1749 aa28.79■■■□□ 2.2
SIM2-203ENST00000460783 STK3Q13188 491 aa28.78■■■□□ 2.2
SIM2-203ENST00000460783 MCMDC2Q4G0Z9 681 aa28.78■■■□□ 2.2
SIM2-203ENST00000460783 DDX46Q7L014 1031 aaKnown RBP28.78■■■□□ 2.2
SIM2-203ENST00000460783 CYP21A2P08686 494 aa28.78■■■□□ 2.2
SIM2-203ENST00000460783 TJP1Q07157 1748 aa28.78■■■□□ 2.2
SIM2-203ENST00000460783 KBTBD3Q8NAB2 608 aa28.77■■■□□ 2.2
SIM2-203ENST00000460783 GTF3C6Q969F1 213 aa28.77■■■□□ 2.2
SIM2-203ENST00000460783 R3HCC1Q9Y3T6 440 aaKnown RBP28.77■■■□□ 2.2
SIM2-203ENST00000460783 UBR2Q8IWV8 1755 aa28.77■■■□□ 2.2
SIM2-203ENST00000460783 KDM4AO75164 1064 aa28.77■■■□□ 2.2
SIM2-203ENST00000460783 TTLL7Q6ZT98 887 aa28.77■■■□□ 2.2
SIM2-203ENST00000460783 SH3TC1Q8TE82 1336 aa28.75■■■□□ 2.19
SIM2-203ENST00000460783 JAK2O60674 1132 aa28.74■■■□□ 2.19
SIM2-203ENST00000460783 LIG1P18858 919 aa28.74■■■□□ 2.19
SIM2-203ENST00000460783 CADPS2Q86UW7 1296 aa28.74■■■□□ 2.19
SIM2-203ENST00000460783 PALLDQ8WX93 1383 aa28.74■■■□□ 2.19
SIM2-203ENST00000460783 RRP9O43818 475 aaKnown RBP28.74■■■□□ 2.19
SIM2-203ENST00000460783 Q6ZUG5 572 aa28.74■■■□□ 2.19
SIM2-203ENST00000460783 LAMA4Q16363 1823 aa28.73■■■□□ 2.19
SIM2-203ENST00000460783 STOX1Q6ZVD7 989 aa28.73■■■□□ 2.19
SIM2-203ENST00000460783 AP5Z1O43299 807 aa28.73■■■□□ 2.19
SIM2-203ENST00000460783 MPNDQ8N594 471 aa28.73■■■□□ 2.19
SIM2-203ENST00000460783 GPR108Q9NPR9 543 aa28.73■■■□□ 2.19
SIM2-203ENST00000460783 CWC25Q9NXE8 425 aaPredicted RBP28.73■■■□□ 2.19
SIM2-203ENST00000460783 KCPQ6ZWJ8 1503 aa28.72■■■□□ 2.19
SIM2-203ENST00000460783 SCAND2PQ9GZW5 306 aaPredicted RBP28.72■■■□□ 2.19
SIM2-203ENST00000460783 CHMP3Q9Y3E7 222 aa28.72■■■□□ 2.19
SIM2-203ENST00000460783 KIAA2012Q0VF49 1180 aa28.71■■■□□ 2.19
SIM2-203ENST00000460783 LEO1Q8WVC0 666 aaPredicted RBP28.71■■■□□ 2.19
SIM2-203ENST00000460783 TFIP11Q9UBB9 837 aaKnown RBP28.71■■■□□ 2.19
SIM2-203ENST00000460783 CCDC9Q9Y3X0 531 aaKnown RBP28.71■■■□□ 2.19
SIM2-203ENST00000460783 SLFNL1Q499Z3 407 aa28.7■■■□□ 2.19
SIM2-203ENST00000460783 A1BGP04217 495 aa28.7■■■□□ 2.18
SIM2-203ENST00000460783 CCDC192P0DO97 292 aa28.7■■■□□ 2.18
SIM2-203ENST00000460783 TIMM10P62072 90 aa28.7■■■□□ 2.18
SIM2-203ENST00000460783 HSP90AA2PQ14568 343 aaPredicted RBP28.7■■■□□ 2.18
SIM2-203ENST00000460783 ZNF830Q96NB3 372 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms