RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TM6SF1Q9BZW5 370 aa21.65■■□□□ 1.06
HPS3-202ENST00000460120 TCHHQ07283 1943 aa21.65■■□□□ 1.06
HPS3-202ENST00000460120 PSMA5P28066 241 aa21.64■■□□□ 1.06
HPS3-202ENST00000460120 GIMAP6Q6P9H5 292 aa21.64■■□□□ 1.06
HPS3-202ENST00000460120 CADPS2Q86UW7 1296 aa21.64■■□□□ 1.06
HPS3-202ENST00000460120 ZSCAN31Q96LW9 406 aaPredicted RBP21.64■■□□□ 1.06
HPS3-202ENST00000460120 SH2B1Q9NRF2 756 aaPredicted RBP21.64■■□□□ 1.06
HPS3-202ENST00000460120 COL15A1P39059 1388 aa21.64■■□□□ 1.05
HPS3-202ENST00000460120 CAMTA1Q9Y6Y1 1673 aa21.64■■□□□ 1.05
HPS3-202ENST00000460120 TAF5LO75529 589 aa21.64■■□□□ 1.05
HPS3-202ENST00000460120 HCLS1P14317 486 aaPredicted RBP21.64■■□□□ 1.05
HPS3-202ENST00000460120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.64■■□□□ 1.052e-6■■■■□ 22.9
HPS3-202ENST00000460120 PLBD2Q8NHP8 589 aa21.64■■□□□ 1.05
HPS3-202ENST00000460120 CRYBG1Q9Y4K1 1723 aa21.64■■□□□ 1.05
HPS3-202ENST00000460120 GOLIM4O00461 696 aa21.63■■□□□ 1.05
HPS3-202ENST00000460120 HSP90B1P14625 803 aaKnown RBP21.63■■□□□ 1.05
HPS3-202ENST00000460120 RPS6KB1P23443 525 aa21.63■■□□□ 1.05
HPS3-202ENST00000460120 KCNB2Q92953 911 aa21.63■■□□□ 1.05
HPS3-202ENST00000460120 PDLIM2Q96JY6 352 aa21.63■■□□□ 1.05
HPS3-202ENST00000460120 ALS2Q96Q42 1657 aa21.63■■□□□ 1.05
HPS3-202ENST00000460120 SPATA31A3Q5VYP0 1347 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 TNS3Q68CZ2 1445 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 UBE2HP62256 183 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 TOB2Q14106 344 aaPredicted RBP21.62■■□□□ 1.05
HPS3-202ENST00000460120 CCDC183Q5T5S1 534 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 ZCRB1Q8TBF4 217 aaKnown RBP21.62■■□□□ 1.05
HPS3-202ENST00000460120 KIF1AQ12756 1690 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 PHF14O94880 888 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 ATP5JP18859 108 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 TFIP11Q9UBB9 837 aaKnown RBP21.62■■□□□ 1.05
HPS3-202ENST00000460120 USP25Q9UHP3 1055 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 MED23Q9ULK4 1368 aa21.62■■□□□ 1.05
HPS3-202ENST00000460120 LRRC24Q50LG9 513 aa21.61■■□□□ 1.05
HPS3-202ENST00000460120 DDX11Q96FC9 970 aa21.61■■□□□ 1.05
HPS3-202ENST00000460120 NAP1L2Q9ULW6 460 aaPredicted RBP21.61■■□□□ 1.05
HPS3-202ENST00000460120 SCN11AQ9UI33 1791 aa21.61■■□□□ 1.05
HPS3-202ENST00000460120 JAK2O60674 1132 aa21.61■■□□□ 1.05
HPS3-202ENST00000460120 FGD1P98174 961 aa21.61■■□□□ 1.05
HPS3-202ENST00000460120 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.61■■□□□ 1.05
HPS3-202ENST00000460120 ZNF609O15014 1411 aa21.59■■□□□ 1.05
HPS3-202ENST00000460120 A0A0G2JLW4 131 aa21.59■■□□□ 1.05
HPS3-202ENST00000460120 FOXO4P98177 505 aa21.59■■□□□ 1.05
HPS3-202ENST00000460120 RABL6Q3YEC7 729 aaPredicted RBP21.59■■□□□ 1.05
HPS3-202ENST00000460120 CASP7P55210 303 aa21.59■■□□□ 1.05
HPS3-202ENST00000460120 CAMK4Q16566 473 aa21.59■■□□□ 1.05
HPS3-202ENST00000460120 ZNF830Q96NB3 372 aaPredicted RBP21.59■■□□□ 1.05
HPS3-202ENST00000460120 BRINP3Q76B58 766 aa21.58■■□□□ 1.05
HPS3-202ENST00000460120 TMEM87AQ8NBN3 555 aa21.58■■□□□ 1.05
HPS3-202ENST00000460120 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
HPS3-202ENST00000460120 CWC25Q9NXE8 425 aaPredicted RBP21.58■■□□□ 1.05
HPS3-202ENST00000460120 Q6ZUG5 572 aa21.58■■□□□ 1.05
HPS3-202ENST00000460120 NEK1Q96PY6 1258 aa21.57■■□□□ 1.04
HPS3-202ENST00000460120 SNRKQ9NRH2 765 aa21.57■■□□□ 1.04
HPS3-202ENST00000460120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.57■■□□□ 1.04
HPS3-202ENST00000460120 CYP21A2P08686 494 aa21.57■■□□□ 1.04
HPS3-202ENST00000460120 ADAMTS7Q9UKP4 1686 aa21.57■■□□□ 1.04
HPS3-202ENST00000460120 CHST3Q7LGC8 479 aa21.57■■□□□ 1.04
HPS3-202ENST00000460120 NOL7Q9UMY1 257 aaKnown RBP21.57■■□□□ 1.04
HPS3-202ENST00000460120 MCMDC2Q4G0Z9 681 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 TTC6Q86TZ1 520 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 HAUS7Q99871 368 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 ATG9AQ7Z3C6 839 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 BRF1Q92994 677 aa21.56■■□□□ 1.04
HPS3-202ENST00000460120 EVA1CP58658 441 aa21.55■■□□□ 1.04
HPS3-202ENST00000460120 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
HPS3-202ENST00000460120 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
HPS3-202ENST00000460120 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.04
HPS3-202ENST00000460120 CEBPZQ03701 1054 aaKnown RBP21.55■■□□□ 1.04
HPS3-202ENST00000460120 ANKRD1Q15327 319 aa21.55■■□□□ 1.04
HPS3-202ENST00000460120 PAG1Q9NWQ8 432 aa21.55■■□□□ 1.04
HPS3-202ENST00000460120 R3HCC1Q9Y3T6 440 aaKnown RBP21.55■■□□□ 1.04
HPS3-202ENST00000460120 H7C1W4 665 aa21.54■■□□□ 1.04
HPS3-202ENST00000460120 STOX1Q6ZVD7 989 aa21.54■■□□□ 1.04
HPS3-202ENST00000460120 CCDC39Q9UFE4 941 aa21.54■■□□□ 1.04
HPS3-202ENST00000460120 AFDNP55196 1824 aaKnown RBP21.54■■□□□ 1.04
HPS3-202ENST00000460120 STRCP1A6NGW2 1772 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 KRT85P78386 507 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 HMG20BQ9P0W2 317 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 TAOK2Q9UL54 1235 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 ZKSCAN5Q9Y2L8 839 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 WDR17Q8IZU2 1322 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 COL18A1P39060 1754 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 LIG1P18858 919 aa21.53■■□□□ 1.04
HPS3-202ENST00000460120 CCT2P78371 535 aaKnown RBP21.52■■□□□ 1.04
HPS3-202ENST00000460120 KBTBD3Q8NAB2 608 aa21.52■■□□□ 1.04
HPS3-202ENST00000460120 CKAP2LQ8IYA6 745 aa21.52■■□□□ 1.04
HPS3-202ENST00000460120 FAM89AQ96GI7 184 aa21.52■■□□□ 1.04
HPS3-202ENST00000460120 A0A1B0GUL7 405 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 ADCY5O95622 1261 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 IFIT1P09914 478 aaKnown RBP21.51■■□□□ 1.03
HPS3-202ENST00000460120 IL2RBP14784 551 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 CSPP1Q1MSJ5 1256 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 SYNE4Q8N205 404 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 GOLGA6L4A6NEF3 574 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 GORABQ5T7V8 394 aa21.51■■□□□ 1.03
HPS3-202ENST00000460120 U3KPZ7 1027 aaPredicted RBP21.51■■□□□ 1.03
HPS3-202ENST00000460120 APOBRQ0VD83 1088 aa21.5■■□□□ 1.03
HPS3-202ENST00000460120 TTLL5Q6EMB2 1281 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms