RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CHPF2Q9P2E5 772 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 MTMR6Q9Y217 621 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 GADD45BO75293 160 aaPredicted RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 IFIT2P09913 472 aaKnown RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 CASTP20810 708 aaKnown RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 GTF2F1P35269 517 aaKnown RBP eCLIP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 OS9Q13438 667 aaPredicted RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 KRT32Q14532 448 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 DDB1Q16531 1140 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 C1orf141Q5JVX7 400 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 USPL1Q5W0Q7 1092 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 ZNF530Q6P9A1 599 aaPredicted RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 KRT27Q7Z3Y8 459 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 CHMP4CQ96CF2 233 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 SCAND2PQ9GZW5 306 aaPredicted RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 C9orf78Q9NZ63 289 aaPredicted RBP7.3□□□□□ -1.24
UBQLN4-202ENST00000459954 GOLGA6L6A8MZA4 724 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 GRM8O00222 908 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 SOCS7O14512 581 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 CCDC192P0DO97 292 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 EIF2S2P20042 333 aaKnown RBP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 GJB2P29033 226 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 KRT85P78386 507 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 G3BP1Q13283 466 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 FAM98CQ17RN3 349 aaKnown RBP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 CREB3L3Q68CJ9 461 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 CWC27Q6UX04 472 aaKnown RBP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 MYRIPQ8NFW9 859 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 NECTIN2Q92692 538 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 SPG7Q9UQ90 795 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 CNPY2Q9Y2B0 182 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 R3HCC1Q9Y3T6 440 aaKnown RBP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 MED23Q9ULK4 1368 aa7.29□□□□□ -1.24
UBQLN4-202ENST00000459954 UBR2Q8IWV8 1755 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 NUP188Q5SRE5 1749 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 DDX60Q8IY21 1712 aaKnown RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 ZBTB7CA1YPR0 619 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 ADCY5O95622 1261 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 TATP17735 454 aaPredicted RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 PTH1RQ03431 593 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 SF3B2Q13435 895 aaKnown RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 NOLC1Q14978 699 aaKnown RBP eCLIP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 ATL3Q6DD88 541 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 BLOC1S2Q6QNY1 142 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 RBM43Q6ZSC3 357 aaKnown RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 RGS22Q8NE09 1264 aa7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 FOXD4L4Q8WXT5 416 aaPredicted RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 JAKMIP1Q96N16 626 aaKnown RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 RBM8AQ9Y5S9 174 aaKnown RBP7.28□□□□□ -1.24
UBQLN4-202ENST00000459954 UQCRHLA0A096LP55 91 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 A0A0G2JS52 829 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 SLC27A2O14975 620 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 SASH1O94885 1247 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 UQCRHP07919 91 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 ATP5JP18859 108 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 RPS6KB1P23443 525 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 NEXNQ0ZGT2 675 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 ME3Q16798 604 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 LARP1BQ659C4 914 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 PRPF40BQ6NWY9 871 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 NOL8Q76FK4 1167 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 AACSQ86V21 672 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 CCDC83Q8IWF9 413 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 RNF214Q8ND24 703 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 ZCRB1Q8TBF4 217 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 FAM200AQ8TCP9 573 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 LTV1Q96GA3 475 aaPredicted RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 LLPHQ9BRT6 129 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 ZSCAN16Q9H4T2 348 aaPredicted RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 COPRSQ9NQ92 184 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 DDX19AQ9NUU7 478 aaKnown RBP7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 PLCH1Q4KWH8 1693 aa7.27□□□□□ -1.25
UBQLN4-202ENST00000459954 KCNQ3O43525 872 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 LARGE1O95461 756 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 MAP4K4O95819 1239 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 HMGB1P09429 215 aaKnown RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 HCLS1P14317 486 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 DNM1Q05193 864 aaKnown RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 ST3GAL1Q11201 340 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 NMIQ13287 307 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 PDIA6Q15084 440 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 MAP3K11Q16584 847 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 ADCK5Q3MIX3 580 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 RABL6Q3YEC7 729 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 KIAA1524Q8TCG1 905 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 EAF2Q96CJ1 260 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 KAZALD1Q96I82 304 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 SUCLG2Q96I99 432 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 CHAMP1Q96JM3 812 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 METTL22Q9BUU2 404 aaPredicted RBP7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 GDPD2Q9HCC8 539 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 GPR108Q9NPR9 543 aa7.26□□□□□ -1.25
UBQLN4-202ENST00000459954 U3KPZ7 1027 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms