RNA–Protein interactions for RNA: ENST00000459799.1

SCNM1-203, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 619 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-203ENST00000459799 VPS33BQ9H267 617 aa12.19□□□□□ -0.46
SCNM1-203ENST00000459799 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
SCNM1-203ENST00000459799 COL6A3P12111 3177 aa12.19□□□□□ -0.46
SCNM1-203ENST00000459799 ANKRD36CQ5JPF3 1778 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 UBN2Q6ZU65 1347 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 RANBP2P49792 3224 aaKnown RBP12.18□□□□□ -0.46
SCNM1-203ENST00000459799 ADM5C9JUS6 153 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 RAD17O75943 681 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 C3orf67Q6ZVT6 689 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 KRT26Q7Z3Y9 468 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 MICALL2Q8IY33 904 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 NYXQ9GZU5 481 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 CUL9Q8IWT3 2517 aa12.18□□□□□ -0.46
SCNM1-203ENST00000459799 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
SCNM1-203ENST00000459799 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
SCNM1-203ENST00000459799 EGFRP00533 1210 aa12.17□□□□□ -0.46
SCNM1-203ENST00000459799 RASAL3Q86YV0 1011 aa12.17□□□□□ -0.46
SCNM1-203ENST00000459799 C2orf69Q8N8R5 385 aa12.17□□□□□ -0.46
SCNM1-203ENST00000459799 ZNF296Q8WUU4 475 aaPredicted RBP12.17□□□□□ -0.46
SCNM1-203ENST00000459799 CNOT7Q9UIV1 285 aaKnown RBP12.17□□□□□ -0.46
SCNM1-203ENST00000459799 TRIOBPQ9H2D6 2365 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 CEP290O15078 2479 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 KIAA2012Q0VF49 1180 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 FBXO46Q6PJ61 603 aaPredicted RBP12.16□□□□□ -0.46
SCNM1-203ENST00000459799 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 RBM17Q96I25 401 aaKnown RBP12.16□□□□□ -0.46
SCNM1-203ENST00000459799 ATP6V0A2Q9Y487 856 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 TAF1P21675 1872 aa12.16□□□□□ -0.46
SCNM1-203ENST00000459799 SNRPA1P09661 255 aaKnown RBP12.15□□□□□ -0.46
SCNM1-203ENST00000459799 POLA2Q14181 598 aa12.15□□□□□ -0.46
SCNM1-203ENST00000459799 TNIP1Q15025 636 aa12.15□□□□□ -0.46
SCNM1-203ENST00000459799 SAMD7Q7Z3H4 446 aa12.15□□□□□ -0.46
SCNM1-203ENST00000459799 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
SCNM1-203ENST00000459799 HDAC9Q9UKV0 1011 aa12.15□□□□□ -0.46
SCNM1-203ENST00000459799 ABCC4O15439 1325 aa12.14□□□□□ -0.47
SCNM1-203ENST00000459799 H7C1D1 291 aa12.14□□□□□ -0.47
SCNM1-203ENST00000459799 DIAPH1O60610 1272 aaKnown RBP12.14□□□□□ -0.47
SCNM1-203ENST00000459799 NTSR2O95665 410 aa12.14□□□□□ -0.47
SCNM1-203ENST00000459799 REM2Q8IYK8 340 aaPredicted RBP12.14□□□□□ -0.47
SCNM1-203ENST00000459799 ZBTB12Q9Y330 459 aaPredicted RBP12.14□□□□□ -0.47
SCNM1-203ENST00000459799 KDM3BQ7LBC6 1761 aa12.14□□□□□ -0.47
SCNM1-203ENST00000459799 SCN9AQ15858 1988 aa12.14□□□□□ -0.47
SCNM1-203ENST00000459799 KIAA0100Q14667 2235 aaKnown RBP12.13□□□□□ -0.47
SCNM1-203ENST00000459799 TBC1D8O95759 1140 aa12.13□□□□□ -0.47
SCNM1-203ENST00000459799 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-203ENST00000459799 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-203ENST00000459799 DPP8Q6V1X1 898 aaPredicted RBP12.13□□□□□ -0.47
SCNM1-203ENST00000459799 MAP3K15Q6ZN16 1313 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 ERVV-1B6SEH8 477 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 GPTP24298 496 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
SCNM1-203ENST00000459799 SUSD4Q5VX71 490 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 DPF2Q92785 391 aa12.12□□□□□ -0.47
SCNM1-203ENST00000459799 PSME4Q14997 1843 aa12.11□□□□□ -0.47
SCNM1-203ENST00000459799 LAMB1P07942 1786 aa12.11□□□□□ -0.47
SCNM1-203ENST00000459799 PSMD14O00487 310 aa12.11□□□□□ -0.47
SCNM1-203ENST00000459799 DCPSQ96C86 337 aaKnown RBP12.11□□□□□ -0.47
SCNM1-203ENST00000459799 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
SCNM1-203ENST00000459799 GGA3Q9NZ52 723 aa12.11□□□□□ -0.47
SCNM1-203ENST00000459799 ASTN2O75129 1339 aaPredicted RBP12.11□□□□□ -0.47
SCNM1-203ENST00000459799 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 GPR25O00155 361 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 TTLL7Q6ZT98 887 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 MPNDQ8N594 471 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-203ENST00000459799 COLQQ9Y215 455 aaPredicted RBP12.1□□□□□ -0.47
SCNM1-203ENST00000459799 KNSTRNQ9Y448 316 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 COL4A1P02462 1669 aa12.1□□□□□ -0.47
SCNM1-203ENST00000459799 DLL1O00548 723 aa12.09□□□□□ -0.47
SCNM1-203ENST00000459799 KIF4BQ2VIQ3 1234 aa12.09□□□□□ -0.47
SCNM1-203ENST00000459799 SP8Q8IXZ3 490 aa12.09□□□□□ -0.47
SCNM1-203ENST00000459799 ZNF34Q8IZ26 560 aa12.09□□□□□ -0.47
SCNM1-203ENST00000459799 PHACTR3Q96KR7 559 aa12.09□□□□□ -0.47
SCNM1-203ENST00000459799 SULF1Q8IWU6 871 aa12.08□□□□□ -0.48
SCNM1-203ENST00000459799 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
SCNM1-203ENST00000459799 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
SCNM1-203ENST00000459799 CFHR5Q9BXR6 569 aa12.08□□□□□ -0.48
SCNM1-203ENST00000459799 ZBTB3Q9H5J0 574 aa12.08□□□□□ -0.48
SCNM1-203ENST00000459799 U2SURPO15042 1029 aaKnown RBP12.07□□□□□ -0.48
SCNM1-203ENST00000459799 RPS12P25398 132 aaKnown RBP12.07□□□□□ -0.48
SCNM1-203ENST00000459799 FKBP1BP68106 108 aa12.07□□□□□ -0.48
SCNM1-203ENST00000459799 RBM26Q5T8P6 1007 aaKnown RBP12.07□□□□□ -0.48
SCNM1-203ENST00000459799 KIF6Q6ZMV9 814 aa12.07□□□□□ -0.48
SCNM1-203ENST00000459799 MCM10Q7L590 875 aa12.07□□□□□ -0.48
SCNM1-203ENST00000459799 R3HDMLQ9H3Y0 253 aa12.07□□□□□ -0.48
SCNM1-203ENST00000459799 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
SCNM1-203ENST00000459799 ZNF609O15014 1411 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 FKTNO75072 461 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 BBOX1O75936 387 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 TM4SF4P48230 202 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 SLC10A5Q5PT55 438 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 MOB2Q70IA6 237 aa12.06□□□□□ -0.48
SCNM1-203ENST00000459799 DLG5Q8TDM6 1919 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 LAMA3Q16787 3333 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 ZNF646O15015 1829 aaPredicted RBP12.05□□□□□ -0.48
SCNM1-203ENST00000459799 PRKAR2BP31323 418 aa12.05□□□□□ -0.48
SCNM1-203ENST00000459799 INTS3Q68E01 1043 aaKnown RBP12.05□□□□□ -0.48
SCNM1-203ENST00000459799 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms