RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 GRAPQ13588 217 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 TMC4Q7Z404 712 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 MPNDQ8N594 471 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-227ENST00000458564 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
HDLBP-227ENST00000458564 ZC3H15Q8WU90 426 aaKnown RBP13.67□□□□□ -0.22
HDLBP-227ENST00000458564 CHL1O00533 1208 aa13.66□□□□□ -0.22
HDLBP-227ENST00000458564 HCLS1P14317 486 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-227ENST00000458564 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
HDLBP-227ENST00000458564 DDX46Q7L014 1031 aaKnown RBP13.66□□□□□ -0.22
HDLBP-227ENST00000458564 HHIPL1Q96JK4 782 aa13.66□□□□□ -0.22
HDLBP-227ENST00000458564 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-227ENST00000458564 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
HDLBP-227ENST00000458564 HOXB7P09629 217 aa13.65□□□□□ -0.22
HDLBP-227ENST00000458564 MAP2K2P36507 400 aa13.65□□□□□ -0.22
HDLBP-227ENST00000458564 TNIP1Q15025 636 aa13.65□□□□□ -0.22
HDLBP-227ENST00000458564 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
HDLBP-227ENST00000458564 SAPCD2Q86UD0 394 aa13.65□□□□□ -0.22
HDLBP-227ENST00000458564 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
HDLBP-227ENST00000458564 PAXIP1Q6ZW49 1069 aaPredicted RBP13.64□□□□□ -0.23
HDLBP-227ENST00000458564 ABHD8Q96I13 439 aa13.64□□□□□ -0.23
HDLBP-227ENST00000458564 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
HDLBP-227ENST00000458564 YDJCA8MPS7 323 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 CA12O43570 354 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 RAD17O75943 681 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 CELF2O95319 508 aaKnown RBP13.63□□□□□ -0.23
HDLBP-227ENST00000458564 HIRAP54198 1017 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-227ENST00000458564 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 NECTIN2Q92692 538 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 ISCA1Q9BUE6 129 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 GLIS2Q9BZE0 524 aaPredicted RBP13.63□□□□□ -0.23
HDLBP-227ENST00000458564 CHPF2Q9P2E5 772 aa13.63□□□□□ -0.23
HDLBP-227ENST00000458564 DDX60Q8IY21 1712 aaKnown RBP13.63□□□□□ -0.23
HDLBP-227ENST00000458564 SF3B3Q15393 1217 aaKnown RBP13.62□□□□□ -0.23
HDLBP-227ENST00000458564 HDGFL1Q5TGJ6 251 aa13.62□□□□□ -0.23
HDLBP-227ENST00000458564 TRPM4Q8TD43 1214 aa13.62□□□□□ -0.23
HDLBP-227ENST00000458564 DPF2Q92785 391 aa13.62□□□□□ -0.23
HDLBP-227ENST00000458564 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
HDLBP-227ENST00000458564 TRIM35Q9UPQ4 493 aa13.62□□□□□ -0.23
HDLBP-227ENST00000458564 MYBBP1AQ9BQG0 1328 aaKnown RBP13.62□□□□□ -0.23
HDLBP-227ENST00000458564 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-227ENST00000458564 TRIM28Q13263 835 aaKnown RBP13.61□□□□□ -0.23
HDLBP-227ENST00000458564 ANKRD13DQ6ZTN6 518 aa13.61□□□□□ -0.23
HDLBP-227ENST00000458564 CDC37L1Q7L3B6 337 aa13.61□□□□□ -0.23
HDLBP-227ENST00000458564 DBF4Q9UBU7 674 aaPredicted RBP13.61□□□□□ -0.23
HDLBP-227ENST00000458564 CNOT7Q9UIV1 285 aaKnown RBP13.61□□□□□ -0.23
HDLBP-227ENST00000458564 H7C1D1 291 aa13.6□□□□□ -0.23
HDLBP-227ENST00000458564 AOC2O75106 756 aa13.6□□□□□ -0.23
HDLBP-227ENST00000458564 GRM1Q13255 1194 aa13.6□□□□□ -0.23
HDLBP-227ENST00000458564 MICALL2Q8IY33 904 aa13.6□□□□□ -0.23
HDLBP-227ENST00000458564 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
HDLBP-227ENST00000458564 TAF1P21675 1872 aa13.59□□□□□ -0.23
HDLBP-227ENST00000458564 RPS12P25398 132 aaKnown RBP13.59□□□□□ -0.23
HDLBP-227ENST00000458564 WASHC4Q2M389 1173 aa13.59□□□□□ -0.23
HDLBP-227ENST00000458564 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
HDLBP-227ENST00000458564 CELF1Q92879 486 aaKnown RBP13.59□□□□□ -0.23
HDLBP-227ENST00000458564 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
HDLBP-227ENST00000458564 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
HDLBP-227ENST00000458564 SHTN1A0MZ66 631 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 PSMD14O00487 310 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 NOGQ13253 232 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 NEUROD2Q15784 382 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 POLLQ9UGP5 575 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
HDLBP-227ENST00000458564 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
HDLBP-227ENST00000458564 COL4A1P02462 1669 aa13.58□□□□□ -0.24
HDLBP-227ENST00000458564 ZNF609O15014 1411 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 EYA3Q99504 573 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 ZNF408Q9H9D4 720 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 DBNDD1Q9H9R9 158 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 LAS1LQ9Y4W2 734 aaKnown RBP13.57□□□□□ -0.24
HDLBP-227ENST00000458564 RTL9Q8NET4 1388 aa13.57□□□□□ -0.24
HDLBP-227ENST00000458564 IRS4O14654 1257 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-227ENST00000458564 RGS19P49795 217 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 GPSM2P81274 684 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 WDR43Q15061 677 aaKnown RBP eCLIP13.56□□□□□ -0.24
HDLBP-227ENST00000458564 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 SAMD7Q7Z3H4 446 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 PODXL2Q9NZ53 605 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 TSKSQ9UJT2 592 aa13.56□□□□□ -0.24
HDLBP-227ENST00000458564 C6orf229H3BNL8 230 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 ECE2O60344 883 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 EGFRP00533 1210 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 ZNF853P0CG23 659 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 HSP90B1P14625 803 aaKnown RBP13.55□□□□□ -0.24
HDLBP-227ENST00000458564 HUNKP57058 714 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
HDLBP-227ENST00000458564 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
HDLBP-227ENST00000458564 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 ZNF428Q96B54 188 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
HDLBP-227ENST00000458564 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
HDLBP-227ENST00000458564 TBC1D10BQ4KMP7 808 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-227ENST00000458564 ADAMTS8Q9UP79 889 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms