RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 CHMP4BQ9H444 224 aaKnown RBP21.13■□□□□ 0.97
TRIM39-211ENST00000458516 C1orf115Q9H7X2 142 aa21.13■□□□□ 0.97
TRIM39-211ENST00000458516 CSF1RP07333 972 aa21.12■□□□□ 0.97
TRIM39-211ENST00000458516 TTLL11Q8NHH1 800 aa21.12■□□□□ 0.97
TRIM39-211ENST00000458516 HDAC5Q9UQL6 1122 aa21.12■□□□□ 0.97
TRIM39-211ENST00000458516 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
TRIM39-211ENST00000458516 LMBR1LQ6UX01 489 aa21.1■□□□□ 0.97
TRIM39-211ENST00000458516 KLHL34Q8N239 644 aa21.1■□□□□ 0.97
TRIM39-211ENST00000458516 PPP1R1BQ9UD71 204 aaPredicted RBP21.1■□□□□ 0.97
TRIM39-211ENST00000458516 RTL9Q8NET4 1388 aa21.1■□□□□ 0.97
TRIM39-211ENST00000458516 SRGNP10124 158 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 CHRNA5P30532 468 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 FAM161AQ3B820 660 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 CCDC152Q4G0S7 254 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 C2CD5Q86YS7 1000 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 CCDC85AQ96PX6 553 aaPredicted RBP21.09■□□□□ 0.97
TRIM39-211ENST00000458516 FHDC1Q9C0D6 1143 aaPredicted RBP21.09■□□□□ 0.97
TRIM39-211ENST00000458516 GREM2Q9H772 168 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 PDZRN3Q9UPQ7 1066 aa21.09■□□□□ 0.97
TRIM39-211ENST00000458516 TGFB2P61812 414 aa21.08■□□□□ 0.97
TRIM39-211ENST00000458516 SLX4Q8IY92 1834 aa21.08■□□□□ 0.96
TRIM39-211ENST00000458516 H0YIN7 160 aa21.07■□□□□ 0.96
TRIM39-211ENST00000458516 DPEP1P16444 411 aa21.07■□□□□ 0.96
TRIM39-211ENST00000458516 MTX1Q13505 466 aa21.07■□□□□ 0.96
TRIM39-211ENST00000458516 NPR1P16066 1061 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 HOXA10P31260 410 aaPredicted RBP21.06■□□□□ 0.96
TRIM39-211ENST00000458516 CEP85Q6P2H3 762 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 NLGN2Q8NFZ4 835 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
TRIM39-211ENST00000458516 MASTLQ96GX5 879 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 SEC31BQ9NQW1 1179 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 CHMP3Q9Y3E7 222 aa21.06■□□□□ 0.96
TRIM39-211ENST00000458516 A0A1B0GUL6 1792 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 A0A0G2JLW4 131 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 KCNA3P22001 575 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 ITGA6P23229 1130 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 AAMPQ13685 434 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 STYK1Q6J9G0 422 aa21.05■□□□□ 0.96
TRIM39-211ENST00000458516 RBM17Q96I25 401 aaKnown RBP21.05■□□□□ 0.96
TRIM39-211ENST00000458516 LRRC37AA6NMS7 1700 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 PNMA6EA0A0J9YXQ4 647 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 NEFLP07196 543 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 ATP8B2P98198 1209 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 DDX46Q7L014 1031 aaKnown RBP21.04■□□□□ 0.96
TRIM39-211ENST00000458516 CRAMP1Q96RY5 1269 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 ARFGEF1Q9Y6D6 1849 aa21.04■□□□□ 0.96
TRIM39-211ENST00000458516 RFX5P48382 616 aaPredicted RBP21.03■□□□□ 0.96
TRIM39-211ENST00000458516 ZNF622Q969S3 477 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRIM39-211ENST00000458516 SYT17Q9BSW7 474 aa21.03■□□□□ 0.96
TRIM39-211ENST00000458516 PCDHB15Q9Y5E8 787 aa21.03■□□□□ 0.96
TRIM39-211ENST00000458516 ANKRD18BA2A2Z9 1011 aa21.02■□□□□ 0.96
TRIM39-211ENST00000458516 SRGAP3O43295 1099 aa21.02■□□□□ 0.96
TRIM39-211ENST00000458516 IFIT5Q13325 482 aaKnown RBP21.02■□□□□ 0.96
TRIM39-211ENST00000458516 GRAPQ13588 217 aa21.02■□□□□ 0.96
TRIM39-211ENST00000458516 POLA2Q14181 598 aa21.02■□□□□ 0.96
TRIM39-211ENST00000458516 SIRT2Q8IXJ6 389 aa21.02■□□□□ 0.96
TRIM39-211ENST00000458516 RPAP2Q8IXW5 612 aaPredicted RBP21.02■□□□□ 0.96
TRIM39-211ENST00000458516 GRAPLQ8TC17 118 aaPredicted RBP21.02■□□□□ 0.96
TRIM39-211ENST00000458516 CELF1Q92879 486 aaKnown RBP21.02■□□□□ 0.96
TRIM39-211ENST00000458516 CCDC57Q2TAC2 916 aa21.01■□□□□ 0.95
TRIM39-211ENST00000458516 SSH3Q8TE77 659 aa21.01■□□□□ 0.95
TRIM39-211ENST00000458516 CNKSR1Q969H4 720 aa21■□□□□ 0.95
TRIM39-211ENST00000458516 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
TRIM39-211ENST00000458516 CDC5LQ99459 802 aaKnown RBP21■□□□□ 0.95
TRIM39-211ENST00000458516 ALDH1B1P30837 517 aa20.99■□□□□ 0.95
TRIM39-211ENST00000458516 PTPN12Q05209 780 aaKnown RBP20.99■□□□□ 0.95
TRIM39-211ENST00000458516 ANKRD18AQ8IVF6 992 aa20.99■□□□□ 0.95
TRIM39-211ENST00000458516 KLHDC4Q8TBB5 520 aa20.99■□□□□ 0.95
TRIM39-211ENST00000458516 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
TRIM39-211ENST00000458516 PRPF40BQ6NWY9 871 aaKnown RBP20.98■□□□□ 0.95
TRIM39-211ENST00000458516 PIM2Q9P1W9 311 aa20.98■□□□□ 0.95
TRIM39-211ENST00000458516 PA2G4Q9UQ80 394 aaKnown RBP20.98■□□□□ 0.95
TRIM39-211ENST00000458516 IGHMBP2P38935 993 aaKnown RBP20.97■□□□□ 0.95
TRIM39-211ENST00000458516 TAF7LQ5H9L4 462 aa20.97■□□□□ 0.95
TRIM39-211ENST00000458516 SLC51AQ86UW1 340 aa20.97■□□□□ 0.95
TRIM39-211ENST00000458516 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
TRIM39-211ENST00000458516 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
TRIM39-211ENST00000458516 LTBP1Q14766 1721 aa20.97■□□□□ 0.95
TRIM39-211ENST00000458516 PPEF1O14829 653 aaPredicted RBP20.96■□□□□ 0.95
TRIM39-211ENST00000458516 BBOX1O75936 387 aa20.96■□□□□ 0.95
TRIM39-211ENST00000458516 WWC3Q9ULE0 1092 aa20.96■□□□□ 0.95
TRIM39-211ENST00000458516 HMMRO75330 724 aa20.95■□□□□ 0.94
TRIM39-211ENST00000458516 PUS3Q9BZE2 481 aaKnown RBP20.95■□□□□ 0.94
TRIM39-211ENST00000458516 BSDC1Q9NW68 430 aaPredicted RBP20.95■□□□□ 0.94
TRIM39-211ENST00000458516 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
TRIM39-211ENST00000458516 DALRD3Q5D0E6 543 aaKnown RBP20.94■□□□□ 0.94
TRIM39-211ENST00000458516 C7orf43Q8WVR3 580 aa20.94■□□□□ 0.94
TRIM39-211ENST00000458516 MPHOSPH8Q99549 860 aa20.94■□□□□ 0.94
TRIM39-211ENST00000458516 LRRC24Q50LG9 513 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 LDHAL6AQ6ZMR3 332 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 TMC4Q7Z404 712 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 SIL1Q9H173 461 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 ATP6V0A2Q9Y487 856 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 SNED1Q8TER0 1413 aa20.93■□□□□ 0.94
TRIM39-211ENST00000458516 EYA2O00167 538 aa20.92■□□□□ 0.94
TRIM39-211ENST00000458516 CIAO1O76071 339 aa20.92■□□□□ 0.94
TRIM39-211ENST00000458516 HDAC1Q13547 482 aaPredicted RBP20.92■□□□□ 0.94
TRIM39-211ENST00000458516 OLFM4Q6UX06 510 aa20.92■□□□□ 0.94
TRIM39-211ENST00000458516 FBXO3Q9UK99 471 aa20.92■□□□□ 0.94
TRIM39-211ENST00000458516 NOP58Q9Y2X3 529 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms