RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
CHCHD3-204ENST00000457942 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
CHCHD3-204ENST00000457942 USP50Q70EL3 339 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-204ENST00000457942 NLRP3Q96P20 1036 aa20.47■□□□□ 0.87
CHCHD3-204ENST00000457942 GLIS2Q9BZE0 524 aaPredicted RBP20.47■□□□□ 0.87
CHCHD3-204ENST00000457942 CC2D2BQ6DHV5 1058 aa20.46■□□□□ 0.87
CHCHD3-204ENST00000457942 MCOLN1Q9GZU1 580 aa20.46■□□□□ 0.87
CHCHD3-204ENST00000457942 TMX4Q9H1E5 349 aaPredicted RBP20.46■□□□□ 0.87
CHCHD3-204ENST00000457942 APAF1O14727 1248 aa20.45■□□□□ 0.86
CHCHD3-204ENST00000457942 HOXA10P31260 410 aaPredicted RBP20.45■□□□□ 0.86
CHCHD3-204ENST00000457942 TNRC18O15417 2968 aaPredicted RBP20.45■□□□□ 0.86
CHCHD3-204ENST00000457942 HOXB7P09629 217 aa20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 CALD1Q05682 793 aaKnown RBP20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 CRAMP1Q96RY5 1269 aa20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 ADARB2Q9NS39 739 aaKnown RBP20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 MBIPQ9NS73 344 aa20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 GPRC5DQ9NZD1 345 aa20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 LAMB2P55268 1798 aa20.44■□□□□ 0.86
CHCHD3-204ENST00000457942 GMPSP49915 693 aaPredicted RBP20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 DUSP27Q5VZP5 1158 aa20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 NLRP10Q86W26 655 aa20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 TRMT112Q9UI30 125 aaKnown RBP20.43■□□□□ 0.86
CHCHD3-204ENST00000457942 TCIRG1Q13488 830 aa20.42■□□□□ 0.86
CHCHD3-204ENST00000457942 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
CHCHD3-204ENST00000457942 HCLS1P14317 486 aaPredicted RBP20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 GNAI1P63096 354 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 DGKZQ13574 1117 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 GRIPAP1Q4V328 841 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 CIAPIN1Q6FI81 312 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 IFT57Q9NWB7 429 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 SH3TC1Q8TE82 1336 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 CASP8AP2Q9UKL3 1982 aa20.41■□□□□ 0.86
CHCHD3-204ENST00000457942 SHTN1A0MZ66 631 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 ABCC4O15439 1325 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 RAD17O75943 681 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 MAP2K2P36507 400 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 CXCL9Q07325 125 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 TRPM4Q8TD43 1214 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
CHCHD3-204ENST00000457942 RGS19P49795 217 aa20.39■□□□□ 0.85
CHCHD3-204ENST00000457942 SLC10A5Q5PT55 438 aa20.39■□□□□ 0.85
CHCHD3-204ENST00000457942 DLK2Q6UY11 383 aa20.39■□□□□ 0.85
CHCHD3-204ENST00000457942 ANKRD13DQ6ZTN6 518 aa20.39■□□□□ 0.85
CHCHD3-204ENST00000457942 BCL2L13Q9BXK5 485 aa20.39■□□□□ 0.85
CHCHD3-204ENST00000457942 ELL2O00472 640 aaPredicted RBP20.38■□□□□ 0.85
CHCHD3-204ENST00000457942 DDX46Q7L014 1031 aaKnown RBP20.38■□□□□ 0.85
CHCHD3-204ENST00000457942 ZIC5Q96T25 663 aa20.38■□□□□ 0.85
CHCHD3-204ENST00000457942 ZNRF3Q9ULT6 936 aa20.38■□□□□ 0.85
CHCHD3-204ENST00000457942 ATP5J2-PTCD1G3V325 749 aa20.37■□□□□ 0.85
CHCHD3-204ENST00000457942 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
CHCHD3-204ENST00000457942 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
CHCHD3-204ENST00000457942 DPP8Q6V1X1 898 aaPredicted RBP20.37■□□□□ 0.85
CHCHD3-204ENST00000457942 ATP6V0A2Q9Y487 856 aa20.37■□□□□ 0.85
CHCHD3-204ENST00000457942 DDX60Q8IY21 1712 aaKnown RBP20.36■□□□□ 0.85
CHCHD3-204ENST00000457942 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
CHCHD3-204ENST00000457942 HIRAP54198 1017 aaPredicted RBP20.36■□□□□ 0.85
CHCHD3-204ENST00000457942 CA12O43570 354 aa20.35■□□□□ 0.85
CHCHD3-204ENST00000457942 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
CHCHD3-204ENST00000457942 TAF1P21675 1872 aa20.35■□□□□ 0.85
CHCHD3-204ENST00000457942 SOX10P56693 466 aa20.34■□□□□ 0.85
CHCHD3-204ENST00000457942 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
CHCHD3-204ENST00000457942 SUPT20HQ8NEM7 779 aa20.34■□□□□ 0.85
CHCHD3-204ENST00000457942 DUOX1Q9NRD9 1551 aa20.34■□□□□ 0.85
CHCHD3-204ENST00000457942 BBOX1O75936 387 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 HUNKP57058 714 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 GRAPQ13588 217 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 CCDC184Q52MB2 194 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 USP48Q86UV5 1035 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 GRAPLQ8TC17 118 aaPredicted RBP20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 FAM89AQ96GI7 184 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 ISCA1Q9BUE6 129 aa20.33■□□□□ 0.85
CHCHD3-204ENST00000457942 MPNDQ8N594 471 aa20.32■□□□□ 0.84
CHCHD3-204ENST00000457942 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
CHCHD3-204ENST00000457942 ZBTB12Q9Y330 459 aaPredicted RBP20.32■□□□□ 0.84
CHCHD3-204ENST00000457942 ANP32CO43423 234 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 CDC37L1Q7L3B6 337 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 SP8Q8IXZ3 490 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 C8orf58Q8NAV2 365 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 HHIPL1Q96JK4 782 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 CHMP4AQ9BY43 222 aa20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
CHCHD3-204ENST00000457942 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 NOGQ13253 232 aa20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 CCDC30Q5VVM6 783 aa20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 MYD88Q99836 296 aa20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 RTFDC1Q9BY42 306 aaPredicted RBP20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 CNOT7Q9UIV1 285 aaKnown RBP20.3■□□□□ 0.84
CHCHD3-204ENST00000457942 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 DDX58O95786 925 aaKnown RBP20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 TNIP1Q15025 636 aa20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 TBC1D10BQ4KMP7 808 aaPredicted RBP20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 SAMD7Q7Z3H4 446 aa20.29■□□□□ 0.84
CHCHD3-204ENST00000457942 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms