RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 DPYDQ12882 1025 aa5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 KANK4Q5T7N3 995 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 SND1Q7KZF4 910 aaKnown RBP eCLIP5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 CALR3Q96L12 384 aaKnown RBP5.64□□□□□ -1.51
HMGB3P30-201ENST00000457863 GATA4P43694 442 aa5.63□□□□□ -1.51
HMGB3P30-201ENST00000457863 ANKMY2Q8IV38 441 aa5.63□□□□□ -1.51
HMGB3P30-201ENST00000457863 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
HMGB3P30-201ENST00000457863 BCL11AQ9H165 835 aa5.63□□□□□ -1.51
HMGB3P30-201ENST00000457863 XP32Q5T750 250 aa5.62□□□□□ -1.51
HMGB3P30-201ENST00000457863 BHMTQ93088 406 aa5.62□□□□□ -1.51
HMGB3P30-201ENST00000457863 NACC1Q96RE7 527 aa5.62□□□□□ -1.51
HMGB3P30-201ENST00000457863 DMGDHQ9UI17 866 aaKnown RBP5.62□□□□□ -1.51
HMGB3P30-201ENST00000457863 SLC6A14Q9UN76 642 aa5.62□□□□□ -1.51
HMGB3P30-201ENST00000457863 FOXO3O43524 673 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 APBA3O96018 575 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 EPB42P16452 691 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 ITGB7P26010 798 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 C8orf86Q6ZUL3 223 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 CHMP7Q8WUX9 453 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 NGLY1Q96IV0 654 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 VRTNQ9H8Y1 702 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 PRDM16Q9HAZ2 1276 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 C11orf16Q9NQ32 467 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 KIAA1522Q9P206 1035 aaPredicted RBP5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 BCS1LQ9Y276 419 aa5.61□□□□□ -1.51
HMGB3P30-201ENST00000457863 LILRB5O75023 590 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 GRNP28799 593 aaKnown RBP5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 WEE1P30291 646 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 CCINQ13939 588 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 MYO19Q96H55 970 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 HINFPQ9BQA5 517 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 GSX2Q9BZM3 304 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 USTQ9Y2C2 406 aa5.6□□□□□ -1.51
HMGB3P30-201ENST00000457863 MAP3K6O95382 1288 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 LMOD1P29536 600 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 INPP5BP32019 993 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 TRIM28Q13263 835 aaKnown RBP5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 DOC2BQ14184 412 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 CFAP70Q5T0N1 1121 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 QTRT2Q9H974 415 aaKnown RBP5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 DNAJB12Q9NXW2 375 aaKnown RBP5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 NAGPAQ9UK23 515 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 IVNS1ABPQ9Y6Y0 642 aa5.59□□□□□ -1.51
HMGB3P30-201ENST00000457863 FAM229AH3BQW9 127 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 NFKB1P19838 968 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 PCSK7Q16549 785 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 RSPO4Q2I0M5 234 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 NKAPLQ5M9Q1 402 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 ILDR2Q71H61 639 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 Q8N3U1 123 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 SREK1Q8WXA9 508 aaKnown RBP5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 PNMA5Q96PV4 448 aa5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 JPH1Q9HDC5 661 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P30-201ENST00000457863 A0A0A0MRY4 1105 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 LOC102724159A0A0B4J2E5 919 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 ELNP15502 786 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 IDH3AP50213 366 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 ARSDP51689 593 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 AFF1P51825 1210 aaKnown RBP5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 PWP2Q15269 919 aaKnown RBP5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 PSAPL1Q6NUJ1 521 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 MRRFQ96E11 262 aaKnown RBP5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 C8orf37Q96NL8 207 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 TPSG1Q9NRR2 321 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 KLK14Q9P0G3 267 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 FRRS1LQ9P0K9 344 aa5.57□□□□□ -1.52
HMGB3P30-201ENST00000457863 ANKRD62A6NC57 917 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 PLEKHD1A6NEE1 506 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 C9orf172C9J069 976 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 RAC1P63000 192 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 TBC1D8BQ0IIM8 1120 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 DGKZQ13574 1117 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 ADGRE1Q14246 886 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 MBTPS1Q14703 1052 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 TRAPPC3LQ5T215 181 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 NOL8Q76FK4 1167 aaKnown RBP5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 ZNF526Q8TF50 670 aaPredicted RBP5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 SEMA6BQ9H3T3 888 aa5.56□□□□□ -1.52
HMGB3P30-201ENST00000457863 DYRK3O43781 588 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 LGR5O75473 907 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 SELPP16109 830 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 GPLD1P80108 840 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 GRIK4Q16099 956 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 TXNDC2Q86VQ3 553 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 TRPM4Q8TD43 1214 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 PBXIP1Q96AQ6 731 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 LENG1Q96BZ8 264 aaPredicted RBP5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 RIPOR2Q9Y4F9 1068 aa5.55□□□□□ -1.52
HMGB3P30-201ENST00000457863 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 MICAL2O94851 1124 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 EGFRP00533 1210 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 IRX6P78412 446 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 NRG1Q02297 640 aaPredicted RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 C11orf91Q3C1V1 193 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 ZNF326Q5BKZ1 582 aaKnown RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 DHX32Q7L7V1 743 aaKnown RBP5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 FAM35AQ86V20 835 aa5.54□□□□□ -1.52
HMGB3P30-201ENST00000457863 TXNRD3Q86VQ6 643 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms