RNA–Protein interactions for RNA: ENST00000457602.1

LINC01888-202, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2 BASIC

Gene LINC01888, Length 574 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-202ENST00000457602 KDM6AO15550 1401 aaPredicted RBP11.15□□□□□ -0.62
LINC01888-202ENST00000457602 KDRP35968 1356 aa11.15□□□□□ -0.63
LINC01888-202ENST00000457602 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 S1PR4O95977 384 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 SSTR3P32745 418 aaPredicted RBP11.14□□□□□ -0.63
LINC01888-202ENST00000457602 IL13P35225 146 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 RFC4P35249 363 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 GGCXP38435 758 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 USP46P62068 366 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 NLGN1Q8N2Q7 840 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 NFATC2IPQ8NCF5 419 aa11.14□□□□□ -0.63
LINC01888-202ENST00000457602 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
LINC01888-202ENST00000457602 KIF7Q2M1P5 1343 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 CNTNAP4Q9C0A0 1308 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 ATP10DQ9P241 1426 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 GOLGB1Q14789 3259 aaKnown RBP11.13□□□□□ -0.63
LINC01888-202ENST00000457602 HOXA2O43364 376 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 RPS6KA4O75676 772 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
LINC01888-202ENST00000457602 RC3H1Q5TC82 1133 aaKnown RBP11.13□□□□□ -0.63
LINC01888-202ENST00000457602 ZNF526Q8TF50 670 aaPredicted RBP11.13□□□□□ -0.63
LINC01888-202ENST00000457602 HLA-CQ95604 372 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 SPSB2Q99619 263 aa11.13□□□□□ -0.63
LINC01888-202ENST00000457602 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
LINC01888-202ENST00000457602 HMOX1P09601 288 aa11.12□□□□□ -0.63
LINC01888-202ENST00000457602 GRIPAP1Q4V328 841 aa11.12□□□□□ -0.63
LINC01888-202ENST00000457602 BRICD5Q6PL45 260 aa11.12□□□□□ -0.63
LINC01888-202ENST00000457602 RNF19BQ6ZMZ0 732 aa11.12□□□□□ -0.63
LINC01888-202ENST00000457602 GPBP1L1Q9HC44 474 aaPredicted RBP11.12□□□□□ -0.63
LINC01888-202ENST00000457602 AKAP4Q5JQC9 854 aa11.11□□□□□ -0.63
LINC01888-202ENST00000457602 CC2D1BQ5T0F9 858 aaKnown RBP11.11□□□□□ -0.63
LINC01888-202ENST00000457602 SLC6A16Q9GZN6 736 aa11.11□□□□□ -0.63
LINC01888-202ENST00000457602 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
LINC01888-202ENST00000457602 PARP3Q9Y6F1 533 aa11.11□□□□□ -0.63
LINC01888-202ENST00000457602 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
LINC01888-202ENST00000457602 GYS1P13807 737 aa11.1□□□□□ -0.63
LINC01888-202ENST00000457602 CRKLP46109 303 aaKnown RBP11.1□□□□□ -0.63
LINC01888-202ENST00000457602 FAM160A2Q8N612 972 aaPredicted RBP11.1□□□□□ -0.63
LINC01888-202ENST00000457602 EMID1Q96A84 441 aaPredicted RBP11.1□□□□□ -0.63
LINC01888-202ENST00000457602 PRKD2Q9BZL6 878 aa11.1□□□□□ -0.63
LINC01888-202ENST00000457602 BCS1LQ9Y276 419 aa11.1□□□□□ -0.63
LINC01888-202ENST00000457602 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
LINC01888-202ENST00000457602 ZNF831Q5JPB2 1677 aa11.1□□□□□ -0.63
LINC01888-202ENST00000457602 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
LINC01888-202ENST00000457602 PXDNLA1KZ92 1463 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 A0A0G2JLW4 131 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 DIAPH1O60610 1272 aaKnown RBP11.09□□□□□ -0.63
LINC01888-202ENST00000457602 MS4A1P11836 297 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 TGFB2P61812 414 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 PDE4DQ08499 809 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 LGR6Q9HBX8 967 aa11.09□□□□□ -0.63
LINC01888-202ENST00000457602 COL5A3P25940 1745 aaPredicted RBP11.09□□□□□ -0.63
LINC01888-202ENST00000457602 DNAJC10Q8IXB1 793 aa11.08□□□□□ -0.64
LINC01888-202ENST00000457602 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
LINC01888-202ENST00000457602 SRP68Q9UHB9 627 aaKnown RBP11.08□□□□□ -0.64
LINC01888-202ENST00000457602 ADCY9O60503 1353 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 PPEF1O14829 653 aaPredicted RBP11.07□□□□□ -0.64
LINC01888-202ENST00000457602 RNMTO43148 476 aaKnown RBP11.07□□□□□ -0.64
LINC01888-202ENST00000457602 DPEP1P16444 411 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
LINC01888-202ENST00000457602 MSS51Q4VC12 460 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 SPIRE2Q8WWL2 714 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
LINC01888-202ENST00000457602 USP42Q9H9J4 1324 aaKnown RBP11.07□□□□□ -0.64
LINC01888-202ENST00000457602 C4AP0C0L4 1744 aa11.06□□□□□ -0.64
LINC01888-202ENST00000457602 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
LINC01888-202ENST00000457602 U2SURPO15042 1029 aaKnown RBP11.06□□□□□ -0.64
LINC01888-202ENST00000457602 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
LINC01888-202ENST00000457602 GUCA2AQ02747 115 aa11.06□□□□□ -0.64
LINC01888-202ENST00000457602 INTS5Q6P9B9 1019 aaKnown RBP11.06□□□□□ -0.64
LINC01888-202ENST00000457602 NUTM1Q86Y26 1132 aa11.06□□□□□ -0.64
LINC01888-202ENST00000457602 PRDM9Q9NQV7 894 aa11.06□□□□□ -0.64
LINC01888-202ENST00000457602 N4BP2Q86UW6 1770 aaPredicted RBP11.05□□□□□ -0.64
LINC01888-202ENST00000457602 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
LINC01888-202ENST00000457602 TJP1Q07157 1748 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 Q3C1V9 767 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 PLA2G2CQ5R387 149 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 BEGAINQ9BUH8 593 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 KIF13BQ9NQT8 1826 aa11.05□□□□□ -0.64
LINC01888-202ENST00000457602 DDR1Q08345 913 aa11.04□□□□□ -0.64
LINC01888-202ENST00000457602 PIM2Q9P1W9 311 aa11.04□□□□□ -0.64
LINC01888-202ENST00000457602 CYP19A1P11511 503 aaPredicted RBP11.03□□□□□ -0.64
LINC01888-202ENST00000457602 TTC5Q8N0Z6 440 aa11.03□□□□□ -0.64
LINC01888-202ENST00000457602 PCDHGC3Q9UN70 934 aa11.03□□□□□ -0.64
LINC01888-202ENST00000457602 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
LINC01888-202ENST00000457602 KIAA1551Q9HCM1 1747 aa11.03□□□□□ -0.64
LINC01888-202ENST00000457602 SOS1Q07889 1333 aaPredicted RBP11.03□□□□□ -0.64
LINC01888-202ENST00000457602 MRC1P22897 1456 aa11.02□□□□□ -0.65
LINC01888-202ENST00000457602 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
LINC01888-202ENST00000457602 KCNA3P22001 575 aa11.02□□□□□ -0.65
LINC01888-202ENST00000457602 CANXP27824 592 aaKnown RBP11.02□□□□□ -0.65
LINC01888-202ENST00000457602 CHRNA5P30532 468 aa11.02□□□□□ -0.65
LINC01888-202ENST00000457602 TEFQ10587 303 aa11.02□□□□□ -0.65
LINC01888-202ENST00000457602 DALRD3Q5D0E6 543 aaKnown RBP11.02□□□□□ -0.65
LINC01888-202ENST00000457602 GAS2L2Q8NHY3 880 aa11.02□□□□□ -0.65
LINC01888-202ENST00000457602 COL15A1P39059 1388 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms