RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 KANK4Q5T7N3 995 aaPredicted RBP7.7□□□□□ -1.18
VPS41-209ENST00000457055 NUDT8Q8WV74 236 aa7.7□□□□□ -1.18
VPS41-209ENST00000457055 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
VPS41-209ENST00000457055 ZMYND15Q9H091 742 aa7.7□□□□□ -1.18
VPS41-209ENST00000457055 DNAJB12Q9NXW2 375 aaKnown RBP7.7□□□□□ -1.18
VPS41-209ENST00000457055 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.7□□□□□ -1.18
VPS41-209ENST00000457055 FAM196BA6NMK8 535 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 EPB42P16452 691 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 CCINQ13939 588 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 NKAPLQ5M9Q1 402 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 BCS1LQ9Y276 419 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 NESP48681 1621 aa7.69□□□□□ -1.18
VPS41-209ENST00000457055 A0A0A0MRY4 1105 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 CLSTN1O94985 981 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 RAC1P63000 192 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 PSAPL1Q6NUJ1 521 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 TICAM2Q86XR7 235 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 VRTNQ9H8Y1 702 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 DMGDHQ9UI17 866 aaKnown RBP7.68□□□□□ -1.18
VPS41-209ENST00000457055 NAGPAQ9UK23 515 aa7.68□□□□□ -1.18
VPS41-209ENST00000457055 C9orf172C9J069 976 aa7.67□□□□□ -1.18
VPS41-209ENST00000457055 DYRK3O43781 588 aa7.67□□□□□ -1.18
VPS41-209ENST00000457055 ELNP15502 786 aa7.67□□□□□ -1.18
VPS41-209ENST00000457055 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
VPS41-209ENST00000457055 KLK14Q9P0G3 267 aa7.67□□□□□ -1.18
VPS41-209ENST00000457055 RGS9O75916 674 aaPredicted RBP7.66□□□□□ -1.18
VPS41-209ENST00000457055 SELPP16109 830 aa7.66□□□□□ -1.18
VPS41-209ENST00000457055 IDH3AP50213 366 aa7.66□□□□□ -1.18
VPS41-209ENST00000457055 AFF1P51825 1210 aaKnown RBP7.66□□□□□ -1.18
VPS41-209ENST00000457055 DGKZQ13574 1117 aa7.66□□□□□ -1.18
VPS41-209ENST00000457055 MBTPS1Q14703 1052 aa7.66□□□□□ -1.18
VPS41-209ENST00000457055 MYO15BQ96JP2 1530 aa7.66□□□□□ -1.18
VPS41-209ENST00000457055 A6NJR5 290 aa7.65□□□□□ -1.18
VPS41-209ENST00000457055 GRNP28799 593 aaKnown RBP7.65□□□□□ -1.18
VPS41-209ENST00000457055 ZEB1P37275 1124 aaPredicted RBP7.65□□□□□ -1.18
VPS41-209ENST00000457055 ADGRE1Q14246 886 aa7.65□□□□□ -1.18
VPS41-209ENST00000457055 KRT25Q7Z3Z0 450 aa7.65□□□□□ -1.18
VPS41-209ENST00000457055 FAM35AQ86V20 835 aa7.65□□□□□ -1.18
VPS41-209ENST00000457055 VTI1AQ96AJ9 217 aa7.65□□□□□ -1.18
VPS41-209ENST00000457055 QTRT2Q9H974 415 aaKnown RBP7.65□□□□□ -1.18
VPS41-209ENST00000457055 SCO2A0A1W2PP80 73 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 FOXO3O43524 673 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 CPB1P15086 417 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 INPP5BP32019 993 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 ARSDP51689 593 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 PCSK7Q16549 785 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 SHISA2Q6UWI4 295 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 DMRTC2Q8IXT2 367 aaPredicted RBP7.64□□□□□ -1.19
VPS41-209ENST00000457055 FMR1NBQ8N0W7 255 aaPredicted RBP7.64□□□□□ -1.19
VPS41-209ENST00000457055 PSMD1Q99460 953 aa7.64□□□□□ -1.19
VPS41-209ENST00000457055 MAP3K6O95382 1288 aa7.63□□□□□ -1.19
VPS41-209ENST00000457055 WEE1P30291 646 aa7.63□□□□□ -1.19
VPS41-209ENST00000457055 NRG1Q02297 640 aaPredicted RBP7.63□□□□□ -1.19
VPS41-209ENST00000457055 TXNRD3Q86VQ6 643 aa7.63□□□□□ -1.19
VPS41-209ENST00000457055 LENG1Q96BZ8 264 aaPredicted RBP7.63□□□□□ -1.19
VPS41-209ENST00000457055 THOC2Q8NI27 1593 aaKnown RBP7.63□□□□□ -1.19
VPS41-209ENST00000457055 FOXD4L6Q3SYB3 417 aaPredicted RBP7.62□□□□□ -1.19
VPS41-209ENST00000457055 PRSS36Q5K4E3 855 aa7.62□□□□□ -1.19
VPS41-209ENST00000457055 FOXD4L3Q6VB84 417 aaPredicted RBP7.62□□□□□ -1.19
VPS41-209ENST00000457055 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
VPS41-209ENST00000457055 NAP1L5Q96NT1 182 aaPredicted RBP7.62□□□□□ -1.19
VPS41-209ENST00000457055 ZFATQ9P243 1243 aa7.62□□□□□ -1.19
VPS41-209ENST00000457055 USP21Q9UK80 565 aa7.62□□□□□ -1.19
VPS41-209ENST00000457055 MICAL2O94851 1124 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 RARAP10276 462 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 TARSP26639 723 aaKnown RBP7.61□□□□□ -1.19
VPS41-209ENST00000457055 MSL1Q68DK7 614 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 IFT43Q96FT9 208 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 MYO19Q96H55 970 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 LPIN3Q9BQK8 851 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 FRRS1LQ9P0K9 344 aa7.61□□□□□ -1.19
VPS41-209ENST00000457055 SASH3O75995 380 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 H2AFB1P0C5Y9 115 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 H2AFB2P0C5Z0 115 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 GPLD1P80108 840 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 MLLT1Q03111 559 aaPredicted RBP7.6□□□□□ -1.19
VPS41-209ENST00000457055 C11orf91Q3C1V1 193 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 PERM1Q5SV97 790 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 CFAP70Q5T0N1 1121 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 ELMSAN1Q6PJG2 1045 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 FAM200AQ8TCP9 573 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 TRPM4Q8TD43 1214 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 C11orf16Q9NQ32 467 aa7.6□□□□□ -1.19
VPS41-209ENST00000457055 ZBTB42B2RXF5 422 aa7.59□□□□□ -1.19
VPS41-209ENST00000457055 RBM25P49756 843 aaKnown RBP7.59□□□□□ -1.19
VPS41-209ENST00000457055 ILDR2Q71H61 639 aa7.59□□□□□ -1.19
VPS41-209ENST00000457055 DTWD1Q8N5C7 304 aa7.59□□□□□ -1.19
VPS41-209ENST00000457055 CCDC136Q96JN2 1154 aa7.59□□□□□ -1.19
VPS41-209ENST00000457055 ARID4AP29374 1257 aaPredicted RBP7.58□□□□□ -1.2
VPS41-209ENST00000457055 PLAURQ03405 335 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 GRIK5Q16478 980 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 WFDC8Q8IUA0 241 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 TP53INP1Q96A56 240 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.58□□□□□ -1.22e-6■■■■■ 113.6
VPS41-209ENST00000457055 USP20Q9Y2K6 914 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
VPS41-209ENST00000457055 RIMBP3CA6NJZ7 1639 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 RIMBP3BA6NNM3 1639 aa7.58□□□□□ -1.2
VPS41-209ENST00000457055 RIMBP3Q9UFD9 1639 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms