RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 TEX13AQ9BXU3 409 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 CCNL1Q9UK58 526 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-202ENST00000456522 EP400Q96L91 3159 aa12.02□□□□□ -0.48
PTCHD1-202ENST00000456522 STARD3NLO95772 234 aa12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 GJA5P36382 358 aa12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 PIP4K2AP48426 406 aaPredicted RBP12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 MCM6Q14566 821 aa12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 PROCA1Q8NCQ7 364 aaPredicted RBP12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 ZNF428Q96B54 188 aa12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 STK31Q9BXU1 1019 aa12.02□□□□□ -0.49
PTCHD1-202ENST00000456522 ANXA1P04083 346 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 A1BGP04217 495 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 ALDH1L2Q3SY69 923 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 SPIRE2Q8WWL2 714 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 CHMP4AQ9BY43 222 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 CACNA1FO60840 1977 aa12.01□□□□□ -0.49
PTCHD1-202ENST00000456522 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
PTCHD1-202ENST00000456522 MYL6BP14649 208 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 TXNRD1Q16881 649 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 PROSER3Q2NL68 480 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 PPP2R2DQ66LE6 453 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
PTCHD1-202ENST00000456522 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 SUPT16HQ9Y5B9 1047 aaKnown RBP12□□□□□ -0.49
PTCHD1-202ENST00000456522 ZNF831Q5JPB2 1677 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
PTCHD1-202ENST00000456522 A6NJR5 290 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 PLSCR1O15162 318 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 BAG6P46379 1132 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 FRAT1Q92837 279 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 DDX21Q9NR30 783 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 LRRC4BQ9NT99 713 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 POLR3EQ9NVU0 708 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 DBF4Q9UBU7 674 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 RABGEF1Q9UJ41 708 aa11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 ZNF330Q9Y3S2 320 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
PTCHD1-202ENST00000456522 MYH14Q7Z406 1995 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 ARHGAP33O14559 1287 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 SPTLC1O15269 473 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 PLIN1O60240 522 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 PBX2P40425 430 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 SLC27A3Q5K4L6 730 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 NBPF14Q5TI25 921 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 NBPF10Q6P3W6 841 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 ILDR2Q71H61 639 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 G2E3Q7L622 706 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 DEFB132Q7Z7B7 95 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 NBPF15Q8N660 670 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 NOB1Q9ULX3 412 aaKnown RBP11.98□□□□□ -0.49
PTCHD1-202ENST00000456522 CICQ96RK0 1608 aaPredicted RBP11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 EZH2Q15910 746 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 CCDC125Q86Z20 511 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 PHAXQ9H814 394 aaKnown RBP11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 HYPKQ9NX55 129 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 KIAA1468Q9P260 1216 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 ZBTB1Q9Y2K1 713 aa11.97□□□□□ -0.49
PTCHD1-202ENST00000456522 LHX8Q68G74 356 aa11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 XAGE3Q8WTP9 111 aa11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 CAMKK2Q96RR4 588 aa11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 RGPD3A6NKT7 1758 aaPredicted RBP11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 RGPD4Q7Z3J3 1758 aa11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
PTCHD1-202ENST00000456522 KIF16BQ96L93 1317 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 CNTNAP4Q9C0A0 1308 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 DDX11L8A8MPP1 907 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 SMAPO00193 183 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 IPO8O15397 1037 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 PSEN2P49810 448 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 RRP1P56182 461 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 FKBP5Q13451 457 aaPredicted RBP11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 RSBN1LQ6PCB5 846 aaPredicted RBP11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 COPS6Q7L5N1 327 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 RIC3Q7Z5B4 369 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 NPM2Q86SE8 214 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 BANK1Q8NDB2 785 aa11.95□□□□□ -0.5
PTCHD1-202ENST00000456522 RREB1Q92766 1687 aa11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 VARS2Q5ST30 1063 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 RC3H1Q5TC82 1133 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 TTLL7Q6ZT98 887 aa11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 SMIM5Q71RC9 77 aa11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 TNNQ9UQP3 1299 aa11.94□□□□□ -0.5
PTCHD1-202ENST00000456522 SPDYE5A6NIY4 337 aa11.93□□□□□ -0.5
PTCHD1-202ENST00000456522 SOCS7O14512 581 aa11.93□□□□□ -0.5
PTCHD1-202ENST00000456522 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-202ENST00000456522 RFC5P40937 340 aa11.93□□□□□ -0.5
PTCHD1-202ENST00000456522 LRP10Q7Z4F1 713 aa11.93□□□□□ -0.5
PTCHD1-202ENST00000456522 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms