RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 CDHR2Q9BYE9 1310 aa15.66■□□□□ 0.1
LMCD1-206ENST00000456506 YDJCA8MPS7 323 aa15.65■□□□□ 0.1
LMCD1-206ENST00000456506 BBOX1O75936 387 aa15.65■□□□□ 0.1
LMCD1-206ENST00000456506 HCLS1P14317 486 aaPredicted RBP15.65■□□□□ 0.1
LMCD1-206ENST00000456506 GMPSP49915 693 aaPredicted RBP15.65■□□□□ 0.1
LMCD1-206ENST00000456506 HIRAP54198 1017 aaPredicted RBP15.65■□□□□ 0.1
LMCD1-206ENST00000456506 XAGE3Q8WTP9 111 aa15.65■□□□□ 0.1
LMCD1-206ENST00000456506 AKAP11Q9UKA4 1901 aa15.64■□□□□ 0.09
LMCD1-206ENST00000456506 CHL1O00533 1208 aa15.64■□□□□ 0.09
LMCD1-206ENST00000456506 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
LMCD1-206ENST00000456506 SUPT20HQ8NEM7 779 aa15.64■□□□□ 0.09
LMCD1-206ENST00000456506 TNRC18O15417 2968 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-206ENST00000456506 GRAPQ13588 217 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 HSP90AB3PQ58FF7 597 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 DPP8Q6V1X1 898 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-206ENST00000456506 SAPCD2Q86UD0 394 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 MPNDQ8N594 471 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-206ENST00000456506 ABHD8Q96I13 439 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 TRIM35Q9UPQ4 493 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 SH3TC1Q8TE82 1336 aa15.63■□□□□ 0.09
LMCD1-206ENST00000456506 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
LMCD1-206ENST00000456506 ECE1P42892 770 aa15.62■□□□□ 0.09
LMCD1-206ENST00000456506 TRPM4Q8TD43 1214 aa15.62■□□□□ 0.09
LMCD1-206ENST00000456506 NECTIN2Q92692 538 aa15.62■□□□□ 0.09
LMCD1-206ENST00000456506 GPR101Q96P66 508 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-206ENST00000456506 GLIS2Q9BZE0 524 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-206ENST00000456506 AOC2O75106 756 aa15.61■□□□□ 0.09
LMCD1-206ENST00000456506 AIMP1Q12904 312 aaKnown RBP15.61■□□□□ 0.09
LMCD1-206ENST00000456506 CIAPIN1Q6FI81 312 aa15.61■□□□□ 0.09
LMCD1-206ENST00000456506 HHIPL1Q96JK4 782 aa15.61■□□□□ 0.09
LMCD1-206ENST00000456506 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
LMCD1-206ENST00000456506 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
LMCD1-206ENST00000456506 RAD17O75943 681 aa15.6■□□□□ 0.09
LMCD1-206ENST00000456506 MAP2K2P36507 400 aa15.6■□□□□ 0.09
LMCD1-206ENST00000456506 ZC3H15Q8WU90 426 aaKnown RBP15.6■□□□□ 0.09
LMCD1-206ENST00000456506 TRMT112Q9UI30 125 aaKnown RBP15.6■□□□□ 0.09
LMCD1-206ENST00000456506 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
LMCD1-206ENST00000456506 RALBP1Q15311 655 aa15.59■□□□□ 0.09
LMCD1-206ENST00000456506 SF3B3Q15393 1217 aaKnown RBP15.59■□□□□ 0.09
LMCD1-206ENST00000456506 DDX46Q7L014 1031 aaKnown RBP15.59■□□□□ 0.09
LMCD1-206ENST00000456506 TMC4Q7Z404 712 aa15.59■□□□□ 0.09
LMCD1-206ENST00000456506 PLBD2Q8NHP8 589 aa15.59■□□□□ 0.09
LMCD1-206ENST00000456506 CELF1Q92879 486 aaKnown RBP15.59■□□□□ 0.09
LMCD1-206ENST00000456506 A0A1B0GUL6 1792 aa15.58■□□□□ 0.08
LMCD1-206ENST00000456506 CELF2O95319 508 aaKnown RBP15.58■□□□□ 0.08
LMCD1-206ENST00000456506 TNIP1Q15025 636 aa15.58■□□□□ 0.08
LMCD1-206ENST00000456506 ZNF428Q96B54 188 aa15.58■□□□□ 0.08
LMCD1-206ENST00000456506 TMX4Q9H1E5 349 aaPredicted RBP15.58■□□□□ 0.08
LMCD1-206ENST00000456506 CNOT7Q9UIV1 285 aaKnown RBP15.58■□□□□ 0.08
LMCD1-206ENST00000456506 RTL9Q8NET4 1388 aa15.58■□□□□ 0.08
LMCD1-206ENST00000456506 EGFRP00533 1210 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 HOXB7P09629 217 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 GRM1Q13255 1194 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 DLK2Q6UY11 383 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 CCDC146Q8IYE0 955 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 POLLQ9UGP5 575 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
LMCD1-206ENST00000456506 ZBTB12Q9Y330 459 aaPredicted RBP15.57■□□□□ 0.08
LMCD1-206ENST00000456506 RGS19P49795 217 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 BRPF1P55201 1214 aaPredicted RBP15.56■□□□□ 0.08
LMCD1-206ENST00000456506 PAXIP1Q6ZW49 1069 aaPredicted RBP15.56■□□□□ 0.08
LMCD1-206ENST00000456506 MICALL2Q8IY33 904 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 DPF2Q92785 391 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 FAM89AQ96GI7 184 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 ZIC5Q96T25 663 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
LMCD1-206ENST00000456506 ZNF609O15014 1411 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 LAMB1P07942 1786 aa15.56■□□□□ 0.08
LMCD1-206ENST00000456506 PSMD14O00487 310 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 GPSM2P81274 684 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 TRIM28Q13263 835 aaKnown RBP15.55■□□□□ 0.08
LMCD1-206ENST00000456506 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 CDC37L1Q7L3B6 337 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 RUNDC1Q96C34 613 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 BCL2L13Q9BXK5 485 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 KCNQ5Q9NR82 932 aa15.55■□□□□ 0.08
LMCD1-206ENST00000456506 ATP5J2-PTCD1G3V325 749 aa15.54■□□□□ 0.08
LMCD1-206ENST00000456506 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
LMCD1-206ENST00000456506 HDGFL1Q5TGJ6 251 aa15.54■□□□□ 0.08
LMCD1-206ENST00000456506 SAMD7Q7Z3H4 446 aa15.54■□□□□ 0.08
LMCD1-206ENST00000456506 DBNDD1Q9H9R9 158 aa15.54■□□□□ 0.08
LMCD1-206ENST00000456506 DBF4Q9UBU7 674 aaPredicted RBP15.54■□□□□ 0.08
LMCD1-206ENST00000456506 FAM155AB1AL88 458 aaPredicted RBP15.53■□□□□ 0.08
LMCD1-206ENST00000456506 ZNF853P0CG23 659 aa15.53■□□□□ 0.08
LMCD1-206ENST00000456506 WASHC4Q2M389 1173 aa15.53■□□□□ 0.08
LMCD1-206ENST00000456506 FAM161AQ3B820 660 aa15.53■□□□□ 0.08
LMCD1-206ENST00000456506 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
LMCD1-206ENST00000456506 NSFL1CQ9UNZ2 370 aaKnown RBP15.53■□□□□ 0.08
LMCD1-206ENST00000456506 CACNA1FO60840 1977 aa15.53■□□□□ 0.08
LMCD1-206ENST00000456506 ECM29Q5VYK3 1845 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 H7C1D1 291 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 RIMBP2O15034 1052 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 CA12O43570 354 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 TBC1D16Q8TBP0 767 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 BEGAINQ9BUH8 593 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 ZNF408Q9H9D4 720 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.08
LMCD1-206ENST00000456506 PAPPA2Q9BXP8 1791 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms