RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 HCLS1P14317 486 aaPredicted RBP20.71■□□□□ 0.91
LINC00963-208ENST00000454968 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
LINC00963-208ENST00000454968 KLRG2A4D1S0 409 aaPredicted RBP20.7■□□□□ 0.9
LINC00963-208ENST00000454968 FAM177BA6PVY3 158 aa20.7■□□□□ 0.9
LINC00963-208ENST00000454968 MSH5O43196 834 aa20.7■□□□□ 0.9
LINC00963-208ENST00000454968 MMP10P09238 476 aa20.7■□□□□ 0.9
LINC00963-208ENST00000454968 NUCB1Q02818 461 aa20.7■□□□□ 0.9
LINC00963-208ENST00000454968 FBXO3Q9UK99 471 aa20.7■□□□□ 0.9
LINC00963-208ENST00000454968 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
LINC00963-208ENST00000454968 GREM2Q9H772 168 aa20.69■□□□□ 0.9
LINC00963-208ENST00000454968 KIF13BQ9NQT8 1826 aa20.68■□□□□ 0.9
LINC00963-208ENST00000454968 RAB11FIP3O75154 756 aa20.68■□□□□ 0.9
LINC00963-208ENST00000454968 CRY2Q49AN0 593 aa20.68■□□□□ 0.9
LINC00963-208ENST00000454968 HSP90AB4PQ58FF6 505 aa20.68■□□□□ 0.9
LINC00963-208ENST00000454968 C3orf67Q6ZVT6 689 aa20.68■□□□□ 0.9
LINC00963-208ENST00000454968 COL4A1P02462 1669 aa20.67■□□□□ 0.9
LINC00963-208ENST00000454968 CCDC152Q4G0S7 254 aa20.67■□□□□ 0.9
LINC00963-208ENST00000454968 PA2G4Q9UQ80 394 aaKnown RBP20.67■□□□□ 0.9
LINC00963-208ENST00000454968 EXOC6BQ9Y2D4 811 aa20.67■□□□□ 0.9
LINC00963-208ENST00000454968 TAF1P21675 1872 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 SURF6O75683 361 aaKnown RBP20.66■□□□□ 0.9
LINC00963-208ENST00000454968 CIAO1O76071 339 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 ITGA6P23229 1130 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 GTF2E1P29083 439 aaPredicted RBP20.66■□□□□ 0.9
LINC00963-208ENST00000454968 IFIT5Q13325 482 aaKnown RBP20.66■□□□□ 0.9
LINC00963-208ENST00000454968 CCDC57Q2TAC2 916 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 NLRP3Q96P20 1036 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 PDZRN3Q9UPQ7 1066 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 A0A1B0GUL6 1792 aa20.66■□□□□ 0.9
LINC00963-208ENST00000454968 ST5P78524 1137 aa20.65■□□□□ 0.9
LINC00963-208ENST00000454968 PARP3Q9Y6F1 533 aa20.65■□□□□ 0.9
LINC00963-208ENST00000454968 MSL1Q68DK7 614 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 ATG9AQ7Z3C6 839 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 CHD1LQ86WJ1 897 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 KLHDC4Q8TBB5 520 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 BRIP1Q9BX63 1249 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 SPEF2Q9C093 1822 aa20.64■□□□□ 0.89
LINC00963-208ENST00000454968 COL11A2P13942 1736 aaPredicted RBP20.64■□□□□ 0.89
LINC00963-208ENST00000454968 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
LINC00963-208ENST00000454968 SASH1O94885 1247 aa20.63■□□□□ 0.89
LINC00963-208ENST00000454968 ERC1Q8IUD2 1116 aa20.63■□□□□ 0.89
LINC00963-208ENST00000454968 KIF1BPQ96EK5 621 aa20.63■□□□□ 0.89
LINC00963-208ENST00000454968 EYA2O00167 538 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 RHPN1Q8TCX5 695 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 LRRCC1Q9C099 1032 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 MTFR1LQ9H019 292 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 CHMP3Q9Y3E7 222 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 C10orf71Q711Q0 1435 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 DLEC1Q9Y238 1755 aa20.62■□□□□ 0.89
LINC00963-208ENST00000454968 HOXA10P31260 410 aaPredicted RBP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 R3HDM1Q15032 1099 aaKnown RBP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 ANKRD45Q5TZF3 282 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 CCDC24Q8N4L8 307 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 RIPOR2Q9Y4F9 1068 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 PDE4AP27815 886 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 IL15P40933 162 aaPredicted RBP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 G3BP1Q13283 466 aaKnown RBP eCLIP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 ZNF594Q96JF6 807 aaPredicted RBP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 CCDC85AQ96PX6 553 aaPredicted RBP20.61■□□□□ 0.89
LINC00963-208ENST00000454968 SGIP1Q9BQI5 828 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 SEC31BQ9NQW1 1179 aa20.61■□□□□ 0.89
LINC00963-208ENST00000454968 SALL3Q9BXA9 1300 aa20.6■□□□□ 0.89
LINC00963-208ENST00000454968 LRRC24Q50LG9 513 aa20.59■□□□□ 0.89
LINC00963-208ENST00000454968 CDC5LQ99459 802 aaKnown RBP20.59■□□□□ 0.89
LINC00963-208ENST00000454968 PUS3Q9BZE2 481 aaKnown RBP20.59■□□□□ 0.89
LINC00963-208ENST00000454968 GPR108Q9NPR9 543 aa20.59■□□□□ 0.89
LINC00963-208ENST00000454968 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.59■□□□□ 0.89
LINC00963-208ENST00000454968 LRRC37AA6NMS7 1700 aa20.59■□□□□ 0.89
LINC00963-208ENST00000454968 KIAA1551Q9HCM1 1747 aa20.59■□□□□ 0.89
LINC00963-208ENST00000454968 NPHP1O15259 732 aa20.58■□□□□ 0.88
LINC00963-208ENST00000454968 LNPKQ9C0E8 428 aa20.58■□□□□ 0.88
LINC00963-208ENST00000454968 SIL1Q9H173 461 aa20.58■□□□□ 0.88
LINC00963-208ENST00000454968 SRGNP10124 158 aa20.57■□□□□ 0.88
LINC00963-208ENST00000454968 PDE6BP35913 854 aa20.57■□□□□ 0.88
LINC00963-208ENST00000454968 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
LINC00963-208ENST00000454968 VGLL2Q8N8G2 317 aa20.57■□□□□ 0.88
LINC00963-208ENST00000454968 ARAP2Q8WZ64 1704 aa20.57■□□□□ 0.88
LINC00963-208ENST00000454968 SMARCA5O60264 1052 aaPredicted RBP20.56■□□□□ 0.88
LINC00963-208ENST00000454968 CELF1Q92879 486 aaKnown RBP20.56■□□□□ 0.88
LINC00963-208ENST00000454968 CRAMP1Q96RY5 1269 aa20.56■□□□□ 0.88
LINC00963-208ENST00000454968 BSDC1Q9NW68 430 aaPredicted RBP20.56■□□□□ 0.88
LINC00963-208ENST00000454968 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
LINC00963-208ENST00000454968 TAF7LQ5H9L4 462 aa20.55■□□□□ 0.88
LINC00963-208ENST00000454968 DDX46Q7L014 1031 aaKnown RBP20.55■□□□□ 0.88
LINC00963-208ENST00000454968 SKAP1Q86WV1 359 aa20.55■□□□□ 0.88
LINC00963-208ENST00000454968 ZBTB7AO95365 584 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 IGHMBP2P38935 993 aaKnown RBP20.54■□□□□ 0.88
LINC00963-208ENST00000454968 OS9Q13438 667 aaPredicted RBP20.54■□□□□ 0.88
LINC00963-208ENST00000454968 GRAPQ13588 217 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 ANKRD18AQ8IVF6 992 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 GRAPLQ8TC17 118 aaPredicted RBP20.54■□□□□ 0.88
LINC00963-208ENST00000454968 OSBPL3Q9H4L5 887 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 MROH5Q6ZUA9 1318 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 LTBP1Q14766 1721 aa20.54■□□□□ 0.88
LINC00963-208ENST00000454968 ZNF609O15014 1411 aa20.53■□□□□ 0.88
LINC00963-208ENST00000454968 PTGER2P43116 358 aa20.53■□□□□ 0.88
LINC00963-208ENST00000454968 TFCP2Q12800 502 aa20.53■□□□□ 0.88
LINC00963-208ENST00000454968 CLASRPQ8N2M8 674 aaKnown RBP20.53■□□□□ 0.88
LINC00963-208ENST00000454968 IL1RAPL2Q9NP60 686 aa20.53■□□□□ 0.88
LINC00963-208ENST00000454968 PSDA5PKW4 1024 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms