RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 WDR33Q9C0J8 1336 aaKnown RBP10.51□□□□□ -0.73
NIF3L1-209ENST00000454952 EIF2S2P20042 333 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 SCNN1DP51172 638 aa10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 RIPK4P57078 832 aa10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 RALBP1Q15311 655 aa10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 DPP8Q6V1X1 898 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 DDX46Q7L014 1031 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 ADARB2Q9NS39 739 aaKnown RBP10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 ZNRF3Q9ULT6 936 aa10.5□□□□□ -0.73
NIF3L1-209ENST00000454952 THSD7BQ9C0I4 1608 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 EPS15P42566 896 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 TNIP1Q15025 636 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 AOC3Q16853 763 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 SP8Q8IXZ3 490 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 GPRC5DQ9NZD1 345 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 COL4A5P29400 1685 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 SH3TC1Q8TE82 1336 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 LTBP1Q14766 1721 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 LAMB2P55268 1798 aa10.49□□□□□ -0.73
NIF3L1-209ENST00000454952 TCERG1O14776 1098 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 LBX1P52954 281 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 PDIA6Q15084 440 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 PAXIP1Q6ZW49 1069 aaPredicted RBP10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 LRP10Q7Z4F1 713 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 MPNDQ8N594 471 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 ZC3H15Q8WU90 426 aaKnown RBP10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 CAPNS2Q96L46 248 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 ABCC4O15439 1325 aa10.48□□□□□ -0.73
NIF3L1-209ENST00000454952 CA12O43570 354 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 HOXB7P09629 217 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 HSPA8P11142 646 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 MAP2K2P36507 400 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 TMPOP42166 694 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 KIAA2012Q0VF49 1180 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 TCIRG1Q13488 830 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 GRAPQ13588 217 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 CIAPIN1Q6FI81 312 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 C3orf67Q6ZVT6 689 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 COPS6Q7L5N1 327 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 NLRP10Q86W26 655 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 GRAPLQ8TC17 118 aaPredicted RBP10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 HHIPL1Q96JK4 782 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 BCL2L13Q9BXK5 485 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 TRMT112Q9UI30 125 aaKnown RBP10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 TLL2Q9Y6L7 1015 aa10.47□□□□□ -0.73
NIF3L1-209ENST00000454952 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 GMPSP49915 693 aaPredicted RBP10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 CXCL9Q07325 125 aa10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 AIMP1Q12904 312 aaKnown RBP10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 XAGE3Q8WTP9 111 aa10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 GPR101Q96P66 508 aaPredicted RBP10.46□□□□□ -0.73
NIF3L1-209ENST00000454952 H7C1D1 291 aa10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 HCLS1P14317 486 aaPredicted RBP10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 PROSER3Q2NL68 480 aa10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 PLBD2Q8NHP8 589 aa10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 SPOCK2Q92563 424 aa10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 PGAP2Q9UHJ9 254 aa10.45□□□□□ -0.74
NIF3L1-209ENST00000454952 LRRC37AA6NMS7 1700 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 MYBBP1AQ9BQG0 1328 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 CHL1O00533 1208 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 CELF2O95319 508 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 ANXA1P04083 346 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 CST9Q5W186 159 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 CDC37L1Q7L3B6 337 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 HYPKQ9NX55 129 aa10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 DBF4Q9UBU7 674 aaPredicted RBP10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 DDX60Q8IY21 1712 aaKnown RBP10.44□□□□□ -0.74
NIF3L1-209ENST00000454952 TRAF5O00463 557 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 GRM1Q13255 1194 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 CYP4F22Q6NT55 531 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 ANKRD13DQ6ZTN6 518 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 SAPCD2Q86UD0 394 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 NECTIN2Q92692 538 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 DPF2Q92785 391 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 RUNDC1Q96C34 613 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 ABHD8Q96I13 439 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 EYA3Q99504 573 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 CHMP4AQ9BY43 222 aa10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 CNOT7Q9UIV1 285 aaKnown RBP10.43□□□□□ -0.74
NIF3L1-209ENST00000454952 RAD17O75943 681 aa10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 RPS12P25398 132 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 BRPF1P55201 1214 aaPredicted RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 CALD1Q05682 793 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 TRIM28Q13263 835 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 SF3B3Q15393 1217 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 WASHC4Q2M389 1173 aa10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 MIER1Q8N108 512 aa10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 CHPF2Q9P2E5 772 aa10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 LAS1LQ9Y4W2 734 aaKnown RBP10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 TAF1P21675 1872 aa10.42□□□□□ -0.74
NIF3L1-209ENST00000454952 NOGQ13253 232 aa10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 NEUROD2Q15784 382 aa10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 MICALL2Q8IY33 904 aa10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 CFAP44Q96MT7 982 aa10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 ISCA1Q9BUE6 129 aa10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 GLIS2Q9BZE0 524 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms