RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 SAPCD2Q86UD0 394 aa16.5■□□□□ 0.23
LINC01875-201ENST00000454477 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
LINC01875-201ENST00000454477 FAM177BA6PVY3 158 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 GOLGA2Q08379 1002 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 KRT24Q2M2I5 525 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 PROSER3Q2NL68 480 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 STK31Q9BXU1 1019 aa16.49■□□□□ 0.23
LINC01875-201ENST00000454477 CCER2I3L3R5 266 aa16.48■□□□□ 0.23
LINC01875-201ENST00000454477 GPTP24298 496 aa16.48■□□□□ 0.23
LINC01875-201ENST00000454477 GRIPAP1Q4V328 841 aa16.48■□□□□ 0.23
LINC01875-201ENST00000454477 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
LINC01875-201ENST00000454477 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
LINC01875-201ENST00000454477 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
LINC01875-201ENST00000454477 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
LINC01875-201ENST00000454477 SCN7AQ01118 1682 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 C21orf2O43822 256 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 ANXA1P04083 346 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 FMR1Q06787 632 aaKnown RBP eCLIP16.47■□□□□ 0.23
LINC01875-201ENST00000454477 NOGQ13253 232 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 SUSD4Q5VX71 490 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 CCDC24Q8N4L8 307 aa16.47■□□□□ 0.23
LINC01875-201ENST00000454477 TRIOBPQ9H2D6 2365 aa16.46■□□□□ 0.23
LINC01875-201ENST00000454477 ELL2O00472 640 aaPredicted RBP16.46■□□□□ 0.23
LINC01875-201ENST00000454477 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
LINC01875-201ENST00000454477 SLC10A5Q5PT55 438 aa16.46■□□□□ 0.23
LINC01875-201ENST00000454477 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
LINC01875-201ENST00000454477 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
LINC01875-201ENST00000454477 C8orf58Q8NAV2 365 aa16.46■□□□□ 0.23
LINC01875-201ENST00000454477 RPGRQ92834 1020 aaKnown RBP16.46■□□□□ 0.23
LINC01875-201ENST00000454477 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
LINC01875-201ENST00000454477 TWISTNBQ3B726 338 aaPredicted RBP16.45■□□□□ 0.22
LINC01875-201ENST00000454477 RTKN2Q8IZC4 609 aa16.45■□□□□ 0.22
LINC01875-201ENST00000454477 RBM17Q96I25 401 aaKnown RBP16.45■□□□□ 0.22
LINC01875-201ENST00000454477 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
LINC01875-201ENST00000454477 LAMB4A4D0S4 1761 aa16.45■□□□□ 0.22
LINC01875-201ENST00000454477 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
LINC01875-201ENST00000454477 NTSR2O95665 410 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 CRY2Q49AN0 593 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 PRPF40BQ6NWY9 871 aaKnown RBP16.44■□□□□ 0.22
LINC01875-201ENST00000454477 NLRP10Q86W26 655 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 TRMT112Q9UI30 125 aaKnown RBP16.44■□□□□ 0.22
LINC01875-201ENST00000454477 SALL2Q9Y467 1007 aaPredicted RBP16.44■□□□□ 0.22
LINC01875-201ENST00000454477 UBN2Q6ZU65 1347 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 SH3TC1Q8TE82 1336 aa16.44■□□□□ 0.22
LINC01875-201ENST00000454477 HOXA10P31260 410 aaPredicted RBP16.43■□□□□ 0.22
LINC01875-201ENST00000454477 CCDC93Q567U6 631 aa16.43■□□□□ 0.22
LINC01875-201ENST00000454477 TSR2Q969E8 191 aaKnown RBP16.43■□□□□ 0.22
LINC01875-201ENST00000454477 RIC1Q4ADV7 1423 aa16.43■□□□□ 0.22
LINC01875-201ENST00000454477 CRAMP1Q96RY5 1269 aa16.42■□□□□ 0.22
LINC01875-201ENST00000454477 TRAF5O00463 557 aa16.41■□□□□ 0.22
LINC01875-201ENST00000454477 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
LINC01875-201ENST00000454477 ISCA1Q9BUE6 129 aa16.41■□□□□ 0.22
LINC01875-201ENST00000454477 TSPYL6Q8N831 410 aa16.4■□□□□ 0.22
LINC01875-201ENST00000454477 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
LINC01875-201ENST00000454477 BCORQ6W2J9 1755 aa16.4■□□□□ 0.22
LINC01875-201ENST00000454477 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
LINC01875-201ENST00000454477 BBOX1O75936 387 aa16.39■□□□□ 0.21
LINC01875-201ENST00000454477 SLC4A2P04920 1241 aa16.39■□□□□ 0.21
LINC01875-201ENST00000454477 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
LINC01875-201ENST00000454477 DDX46Q7L014 1031 aaKnown RBP16.39■□□□□ 0.21
LINC01875-201ENST00000454477 TMC4Q7Z404 712 aa16.39■□□□□ 0.21
LINC01875-201ENST00000454477 E9PSI1 815 aa16.38■□□□□ 0.21
LINC01875-201ENST00000454477 GPC2Q8N158 579 aa16.38■□□□□ 0.21
LINC01875-201ENST00000454477 C7orf43Q8WVR3 580 aa16.38■□□□□ 0.21
LINC01875-201ENST00000454477 ZIC5Q96T25 663 aa16.38■□□□□ 0.21
LINC01875-201ENST00000454477 METTL22Q9BUU2 404 aaPredicted RBP16.38■□□□□ 0.21
LINC01875-201ENST00000454477 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
LINC01875-201ENST00000454477 VAMP4O75379 141 aa16.37■□□□□ 0.21
LINC01875-201ENST00000454477 CELF2O95319 508 aaKnown RBP16.37■□□□□ 0.21
LINC01875-201ENST00000454477 FKBP4Q02790 459 aaKnown RBP eCLIP16.37■□□□□ 0.21
LINC01875-201ENST00000454477 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
LINC01875-201ENST00000454477 CWC25Q9NXE8 425 aaPredicted RBP16.37■□□□□ 0.21
LINC01875-201ENST00000454477 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
LINC01875-201ENST00000454477 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
LINC01875-201ENST00000454477 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
LINC01875-201ENST00000454477 VPS33BQ9H267 617 aa16.36■□□□□ 0.21
LINC01875-201ENST00000454477 SUPT20HQ8NEM7 779 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 ZNF428Q96B54 188 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 PSMD1Q99460 953 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 MYD88Q99836 296 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 RNF186Q9NXI6 227 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 MAP3K2Q9Y2U5 619 aa16.35■□□□□ 0.21
LINC01875-201ENST00000454477 COL11A2P13942 1736 aaPredicted RBP16.35■□□□□ 0.21
LINC01875-201ENST00000454477 PI4KAP2A4QPH2 592 aa16.34■□□□□ 0.21
LINC01875-201ENST00000454477 FZD9O00144 591 aa16.34■□□□□ 0.21
LINC01875-201ENST00000454477 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
LINC01875-201ENST00000454477 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
LINC01875-201ENST00000454477 TRPA1O75762 1119 aa16.34■□□□□ 0.21
LINC01875-201ENST00000454477 PCCAP05165 728 aaPredicted RBP16.34■□□□□ 0.21
LINC01875-201ENST00000454477 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
LINC01875-201ENST00000454477 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
LINC01875-201ENST00000454477 PI4KAP1Q8N8J0 262 aa16.34■□□□□ 0.21
LINC01875-201ENST00000454477 FLIIQ13045 1269 aa16.33■□□□□ 0.2
LINC01875-201ENST00000454477 FKBP5Q13451 457 aaPredicted RBP16.33■□□□□ 0.2
LINC01875-201ENST00000454477 GRAPQ13588 217 aa16.33■□□□□ 0.2
LINC01875-201ENST00000454477 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
LINC01875-201ENST00000454477 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
LINC01875-201ENST00000454477 JDP2Q8WYK2 163 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms