RNA–Protein interactions for RNA: ENST00000453937.2

LAMA4-209, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-209ENST00000453937 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
LAMA4-209ENST00000453937 LRRFIP2Q9Y608 721 aaKnown RBP18.29■□□□□ 0.52
LAMA4-209ENST00000453937 NPHP1O15259 732 aa18.28■□□□□ 0.52
LAMA4-209ENST00000453937 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
LAMA4-209ENST00000453937 MTX1Q13505 466 aa18.28■□□□□ 0.52
LAMA4-209ENST00000453937 TAF1P21675 1872 aa18.28■□□□□ 0.52
LAMA4-209ENST00000453937 GNAI2P04899 355 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 DPEP1P16444 411 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 CHRNA5P30532 468 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 LMBR1LQ6UX01 489 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 NLGN2Q8NFZ4 835 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 PDZRN3Q9UPQ7 1066 aa18.27■□□□□ 0.52
LAMA4-209ENST00000453937 C2CD5Q86YS7 1000 aa18.26■□□□□ 0.51
LAMA4-209ENST00000453937 EXOC6Q8TAG9 804 aa18.26■□□□□ 0.51
LAMA4-209ENST00000453937 SYT17Q9BSW7 474 aa18.26■□□□□ 0.51
LAMA4-209ENST00000453937 A0A0G2JLW4 131 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 NPR1P16066 1061 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 STYK1Q6J9G0 422 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 CRAMP1Q96RY5 1269 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 GREM2Q9H772 168 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 C1orf115Q9H7X2 142 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 HDAC5Q9UQL6 1122 aa18.25■□□□□ 0.51
LAMA4-209ENST00000453937 H0YIN7 160 aa18.24■□□□□ 0.51
LAMA4-209ENST00000453937 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
LAMA4-209ENST00000453937 IRX6P78412 446 aaPredicted RBP18.24■□□□□ 0.51
LAMA4-209ENST00000453937 FAM161AQ3B820 660 aa18.24■□□□□ 0.51
LAMA4-209ENST00000453937 CCDC152Q4G0S7 254 aa18.24■□□□□ 0.51
LAMA4-209ENST00000453937 SEC31BQ9NQW1 1179 aa18.24■□□□□ 0.51
LAMA4-209ENST00000453937 PPP1R1BQ9UD71 204 aaPredicted RBP18.24■□□□□ 0.51
LAMA4-209ENST00000453937 SLX4Q8IY92 1834 aa18.23■□□□□ 0.51
LAMA4-209ENST00000453937 SIRT2Q8IXJ6 389 aa18.23■□□□□ 0.51
LAMA4-209ENST00000453937 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
LAMA4-209ENST00000453937 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
LAMA4-209ENST00000453937 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
LAMA4-209ENST00000453937 POLA2Q14181 598 aa18.22■□□□□ 0.51
LAMA4-209ENST00000453937 CEP85Q6P2H3 762 aa18.22■□□□□ 0.51
LAMA4-209ENST00000453937 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
LAMA4-209ENST00000453937 ITGA6P23229 1130 aa18.21■□□□□ 0.51
LAMA4-209ENST00000453937 AAMPQ13685 434 aa18.21■□□□□ 0.51
LAMA4-209ENST00000453937 C7orf43Q8WVR3 580 aa18.21■□□□□ 0.51
LAMA4-209ENST00000453937 CELF1Q92879 486 aaKnown RBP18.21■□□□□ 0.51
LAMA4-209ENST00000453937 RBM17Q96I25 401 aaKnown RBP18.21■□□□□ 0.51
LAMA4-209ENST00000453937 PCDHB15Q9Y5E8 787 aa18.21■□□□□ 0.51
LAMA4-209ENST00000453937 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 CACNA1SQ13698 1873 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 GRAPQ13588 217 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
LAMA4-209ENST00000453937 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 KLHL34Q8N239 644 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 GRAPLQ8TC17 118 aaPredicted RBP18.2■□□□□ 0.5
LAMA4-209ENST00000453937 SSH3Q8TE77 659 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 RPGRQ92834 1020 aaKnown RBP18.2■□□□□ 0.5
LAMA4-209ENST00000453937 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
LAMA4-209ENST00000453937 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
LAMA4-209ENST00000453937 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
LAMA4-209ENST00000453937 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
LAMA4-209ENST00000453937 ARFGEF1Q9Y6D6 1849 aa18.19■□□□□ 0.5
LAMA4-209ENST00000453937 ALDH1B1P30837 517 aa18.18■□□□□ 0.5
LAMA4-209ENST00000453937 RPS8P62241 208 aaKnown RBP18.18■□□□□ 0.5
LAMA4-209ENST00000453937 IFIT5Q13325 482 aaKnown RBP18.18■□□□□ 0.5
LAMA4-209ENST00000453937 CNKSR1Q969H4 720 aa18.18■□□□□ 0.5
LAMA4-209ENST00000453937 ZNF622Q969S3 477 aaKnown RBP eCLIP18.18■□□□□ 0.5
LAMA4-209ENST00000453937 PIM2Q9P1W9 311 aa18.18■□□□□ 0.5
LAMA4-209ENST00000453937 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
LAMA4-209ENST00000453937 ANKRD18BA2A2Z9 1011 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 BBOX1O75936 387 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 YY1P25490 414 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 PRPF40BQ6NWY9 871 aaKnown RBP18.17■□□□□ 0.5
LAMA4-209ENST00000453937 TTLL6Q8N841 843 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 ZNF594Q96JF6 807 aaPredicted RBP18.17■□□□□ 0.5
LAMA4-209ENST00000453937 COPRSQ9NQ92 184 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 A0A1B0GUL6 1792 aa18.17■□□□□ 0.5
LAMA4-209ENST00000453937 DCAF8L1A6NGE4 600 aa18.16■□□□□ 0.5
LAMA4-209ENST00000453937 CCDC57Q2TAC2 916 aa18.16■□□□□ 0.5
LAMA4-209ENST00000453937 KLHDC4Q8TBB5 520 aa18.16■□□□□ 0.5
LAMA4-209ENST00000453937 CDC5LQ99459 802 aaKnown RBP18.16■□□□□ 0.5
LAMA4-209ENST00000453937 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
LAMA4-209ENST00000453937 ANKRD18AQ8IVF6 992 aa18.15■□□□□ 0.5
LAMA4-209ENST00000453937 PUS3Q9BZE2 481 aaKnown RBP18.15■□□□□ 0.5
LAMA4-209ENST00000453937 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
LAMA4-209ENST00000453937 PA2G4Q9UQ80 394 aaKnown RBP18.15■□□□□ 0.5
LAMA4-209ENST00000453937 RIPOR2Q9Y4F9 1068 aa18.15■□□□□ 0.5
LAMA4-209ENST00000453937 OLFM4Q6UX06 510 aa18.14■□□□□ 0.49
LAMA4-209ENST00000453937 ATG9AQ7Z3C6 839 aa18.14■□□□□ 0.49
LAMA4-209ENST00000453937 NOP58Q9Y2X3 529 aaKnown RBP18.14■□□□□ 0.49
LAMA4-209ENST00000453937 ATP6V0A2Q9Y487 856 aa18.14■□□□□ 0.49
LAMA4-209ENST00000453937 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
LAMA4-209ENST00000453937 LRRC24Q50LG9 513 aa18.13■□□□□ 0.49
LAMA4-209ENST00000453937 DALRD3Q5D0E6 543 aaKnown RBP18.13■□□□□ 0.49
LAMA4-209ENST00000453937 TMC4Q7Z404 712 aa18.13■□□□□ 0.49
LAMA4-209ENST00000453937 SP8Q8IXZ3 490 aa18.13■□□□□ 0.49
LAMA4-209ENST00000453937 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
LAMA4-209ENST00000453937 FBXO3Q9UK99 471 aa18.12■□□□□ 0.49
LAMA4-209ENST00000453937 MINPP1Q9UNW1 487 aa18.12■□□□□ 0.49
LAMA4-209ENST00000453937 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
LAMA4-209ENST00000453937 EYA2O00167 538 aa18.11■□□□□ 0.49
LAMA4-209ENST00000453937 CIAO1O76071 339 aa18.11■□□□□ 0.49
LAMA4-209ENST00000453937 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms