RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 MPNDQ8N594 471 aa17.02■□□□□ 0.32
PTPA-224ENST00000453358 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
PTPA-224ENST00000453358 RAD17O75943 681 aa17.01■□□□□ 0.31
PTPA-224ENST00000453358 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
PTPA-224ENST00000453358 NLRP10Q86W26 655 aa17.01■□□□□ 0.31
PTPA-224ENST00000453358 HHIPL1Q96JK4 782 aa17.01■□□□□ 0.31
PTPA-224ENST00000453358 LAMB2P55268 1798 aa17.01■□□□□ 0.31
PTPA-224ENST00000453358 GRAPQ13588 217 aa17■□□□□ 0.31
PTPA-224ENST00000453358 HSP90AB3PQ58FF7 597 aa17■□□□□ 0.31
PTPA-224ENST00000453358 COPS6Q7L5N1 327 aa17■□□□□ 0.31
PTPA-224ENST00000453358 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
PTPA-224ENST00000453358 TRPM4Q8TD43 1214 aa17■□□□□ 0.31
PTPA-224ENST00000453358 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
PTPA-224ENST00000453358 BCL2L13Q9BXK5 485 aa17■□□□□ 0.31
PTPA-224ENST00000453358 BABAM1Q9NWV8 329 aa17■□□□□ 0.31
PTPA-224ENST00000453358 ANKRD36CQ5JPF3 1778 aa17■□□□□ 0.31
PTPA-224ENST00000453358 CCDC85CA6NKD9 419 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 YDJCA8MPS7 323 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 CA12O43570 354 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 TNIP1Q15025 636 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
PTPA-224ENST00000453358 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
PTPA-224ENST00000453358 SH3TC1Q8TE82 1336 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 DUOX1Q9NRD9 1551 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 SHTN1A0MZ66 631 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 SLC34A2O95436 690 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 RGS19P49795 217 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 BRPF1P55201 1214 aaPredicted RBP16.98■□□□□ 0.31
PTPA-224ENST00000453358 RIPK4P57078 832 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 AIMP1Q12904 312 aaKnown RBP16.98■□□□□ 0.31
PTPA-224ENST00000453358 NECTIN2Q92692 538 aa16.98■□□□□ 0.31
PTPA-224ENST00000453358 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
PTPA-224ENST00000453358 CNOT7Q9UIV1 285 aaKnown RBP16.98■□□□□ 0.31
PTPA-224ENST00000453358 TNRC18O15417 2968 aaPredicted RBP16.98■□□□□ 0.31
PTPA-224ENST00000453358 CDC37L1Q7L3B6 337 aa16.97■□□□□ 0.31
PTPA-224ENST00000453358 ZNF408Q9H9D4 720 aa16.97■□□□□ 0.31
PTPA-224ENST00000453358 MLLT1Q03111 559 aaPredicted RBP16.96■□□□□ 0.31
PTPA-224ENST00000453358 TMC4Q7Z404 712 aa16.96■□□□□ 0.31
PTPA-224ENST00000453358 TAF1P21675 1872 aa16.95■□□□□ 0.3
PTPA-224ENST00000453358 H7C1D1 291 aa16.95■□□□□ 0.3
PTPA-224ENST00000453358 MICALL2Q8IY33 904 aa16.95■□□□□ 0.3
PTPA-224ENST00000453358 MCOLN1Q9GZU1 580 aa16.95■□□□□ 0.3
PTPA-224ENST00000453358 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
PTPA-224ENST00000453358 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
PTPA-224ENST00000453358 KRT24Q2M2I5 525 aa16.94■□□□□ 0.3
PTPA-224ENST00000453358 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
PTPA-224ENST00000453358 DPF2Q92785 391 aa16.94■□□□□ 0.3
PTPA-224ENST00000453358 ZNF428Q96B54 188 aa16.94■□□□□ 0.3
PTPA-224ENST00000453358 ZIC5Q96T25 663 aa16.94■□□□□ 0.3
PTPA-224ENST00000453358 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
PTPA-224ENST00000453358 CASP8AP2Q9UKL3 1982 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 PSMD14O00487 310 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 NOGQ13253 232 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 DLK2Q6UY11 383 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 SAMD7Q7Z3H4 446 aa16.93■□□□□ 0.3
PTPA-224ENST00000453358 HUNKP57058 714 aa16.92■□□□□ 0.3
PTPA-224ENST00000453358 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
PTPA-224ENST00000453358 CELF1Q92879 486 aaKnown RBP16.92■□□□□ 0.3
PTPA-224ENST00000453358 DBNDD1Q9H9R9 158 aa16.92■□□□□ 0.3
PTPA-224ENST00000453358 CHPF2Q9P2E5 772 aa16.92■□□□□ 0.3
PTPA-224ENST00000453358 DDX60Q8IY21 1712 aaKnown RBP16.92■□□□□ 0.3
PTPA-224ENST00000453358 CHL1O00533 1208 aa16.91■□□□□ 0.3
PTPA-224ENST00000453358 EGFRP00533 1210 aa16.91■□□□□ 0.3
PTPA-224ENST00000453358 SF3B3Q15393 1217 aaKnown RBP16.91■□□□□ 0.3
PTPA-224ENST00000453358 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
PTPA-224ENST00000453358 NSFL1CQ9UNZ2 370 aaKnown RBP16.91■□□□□ 0.3
PTPA-224ENST00000453358 DGKZQ13574 1117 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 TBC1D10BQ4KMP7 808 aaPredicted RBP16.9■□□□□ 0.3
PTPA-224ENST00000453358 KRT26Q7Z3Y9 468 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 PLBD2Q8NHP8 589 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 POLLQ9UGP5 575 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 COL4A1P02462 1669 aa16.9■□□□□ 0.3
PTPA-224ENST00000453358 RTL9Q8NET4 1388 aa16.89■□□□□ 0.3
PTPA-224ENST00000453358 FAM155AB1AL88 458 aaPredicted RBP16.89■□□□□ 0.29
PTPA-224ENST00000453358 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
PTPA-224ENST00000453358 C6orf229H3BNL8 230 aa16.89■□□□□ 0.29
PTPA-224ENST00000453358 RIMBP2O15034 1052 aa16.89■□□□□ 0.29
PTPA-224ENST00000453358 RPS12P25398 132 aaKnown RBP16.89■□□□□ 0.29
PTPA-224ENST00000453358 GPSM2P81274 684 aa16.89■□□□□ 0.29
PTPA-224ENST00000453358 KCNQ5Q9NR82 932 aa16.89■□□□□ 0.29
PTPA-224ENST00000453358 ADM5C9JUS6 153 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 ECE2O60344 883 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 RGMBQ6NW40 437 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
PTPA-224ENST00000453358 GBA2Q9HCG7 927 aaPredicted RBP16.88■□□□□ 0.29
PTPA-224ENST00000453358 NEUROD2Q15784 382 aa16.87■□□□□ 0.29
PTPA-224ENST00000453358 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
PTPA-224ENST00000453358 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
PTPA-224ENST00000453358 TRIM35Q9UPQ4 493 aa16.87■□□□□ 0.29
PTPA-224ENST00000453358 HOXB7P09629 217 aa16.86■□□□□ 0.29
PTPA-224ENST00000453358 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
PTPA-224ENST00000453358 RALBP1Q15311 655 aa16.86■□□□□ 0.29
PTPA-224ENST00000453358 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
PTPA-224ENST00000453358 RBM26Q5T8P6 1007 aaKnown RBP16.86■□□□□ 0.29
PTPA-224ENST00000453358 C2orf69Q8N8R5 385 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms